Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G100900 Populus trichocarpa HOM05D008631 ORTHO05D010718 2.1e-158 562.4 300 100.0
Potri.015G099100 Populus trichocarpa HOM05D008631 ORTHO05D010718 2.0e-76 290.0 222 75.2
Sabra15G0120000 Salix brachista HOM05D008631 ORTHO05D010718 1.5e-55 220.7 219 56.6
Manes.14G049400 Manihot esculenta HOM05D008631 ORTHO05D010718 8.9e-48 194.9 261 47.1
Manes.06G121100 Manihot esculenta HOM05D008631 ORTHO05D010718 1.2e-36 157.9 262 42.4
Dinv23168 Davidia involucrata HOM05D008631 ORTHO05D010718 2.1e-33 147.1 253 45.5
QL10p002471 Quercus lobata HOM05D008631 ORTHO05D010718 2.1e-33 147.1 265 44.2
Cfa018774 Carpinus fangiana HOM05D008631 ORTHO05D010718 1.7e-30 137.5 255 44.7
Haze_07165 Corylus avellana HOM05D008631 ORTHO05D010718 4.6e-28 129.4 255 44.7
Thecc.03G132000 Theobroma cacao HOM05D008631 ORTHO05D010718 3.0e-27 126.7 211 44.5
Gohir.D12G192650 Gossypium hirsutum HOM05D008631 ORTHO05D010718 1.6e-25 120.9 246 38.2
MD06G1138600 Malus domestica HOM05D008631 ORTHO05D010718 2.1e-25 120.6 278 38.1
Prupe.5G148800 Prunus persica HOM05D008631 ORTHO05D010718 2.8e-25 120.2 148 52.7
Gorai.008G207200 Gossypium raimondii HOM05D008631 ORTHO05D010718 6.2e-25 119.0 246 38.2
TAR629G0833 Trochodendron aralioides HOM05D008631 ORTHO05D010718 6.2e-25 119.0 257 38.9
CiPaw.12G044800 Carya illinoinensis HOM05D008631 ORTHO05D010718 2.6e-23 113.6 283 37.5
MD14G1154600 Malus domestica HOM05D008631 ORTHO05D010718 4.4e-23 112.8 275 34.5
FvH4_5g08620 Fragaria vesca HOM05D008631 ORTHO05D010718 6.4e-22 109.0 174 43.7
FAN08G1367 Fragaria x ananassa HOM05D008631 ORTHO05D010718 1.4e-21 107.8 174 43.1
FAN18G4587 Fragaria x ananassa HOM05D008631 ORTHO05D010718 1.4e-21 107.8 174 43.7
FAN04G0039 Fragaria x ananassa HOM05D008631 ORTHO05D010718 7.1e-21 105.5 174 43.1
FAN13G1892 Fragaria x ananassa HOM05D008631 ORTHO05D010718 9.3e-21 105.1 174 43.1
Gohir.A12G190350 Gossypium hirsutum HOM05D008631 ORTHO05D010718 1.1e-18 98.2 202 37.6
RcHm_v2.0_Chr7g0189791 Rosa chinensis HOM05D008631 ORTHO05D010718 1.6e-17 94.4 173 41.6
COL.COLO4_06540 Corchorus olitorius HOM05D008631 ORTHO05D010718 3.1e-16 90.1 95 54.7
Nn3g16411 Nelumbo nucifera HOM05D008631 ORTHO05D010718 9.0e-16 88.6 261 33.0
Cfa018773 Carpinus fangiana HOM05D008631 ORTHO05D010718 3.8e-14 83.2 113 51.3
Atru.chr6.1827 Acer truncatum HOM05D008631 ORTHO05D010718 6.4e-14 82.4 151 43.0
Peaxi162Scf01390g00006 Petunia axillaris HOM05D008631 ORTHO05D010718 1.1e-13 81.6 145 35.2
Nn4g22271 Nelumbo nucifera HOM05D008631 ORTHO05D010718 9.3e-13 78.6 263 29.3
Haze_07166 Corylus avellana HOM05D008631 ORTHO05D010718 1.6e-12 77.8 255 32.9
Ciclev10032814m.g Citrus clementina HOM05D008631 ORTHO05D010718 2.7e-12 77.0 148 40.5
Lsat_1_v5_gn_1_33001 Lactuca sativa HOM05D008631 ORTHO05D010718 4.6e-12 76.3 150 35.3
Actinidia18339 Actinidia chinensis HOM05D004514 ORTHO05D005147 1.8e-11 74.3 190 33.2
Solyc03g019740.1 Solanum lycopersicum HOM05D008631 ORTHO05D010718 9.6e-10 68.6 115 40.9
MSTRG.11267 Avicennia marina HOM05D008631 ORTHO05D010718 2.4e-08 63.9 270 28.1
VMungo1309G1529 Vigna mungo HOM05D008631 ORTHO05D010718 2.4e-08 63.9 260 28.1
Phvul.009G165000 Phaseolus vulgaris HOM05D008631 ORTHO05D010718 1.5e-07 61.2 151 35.8
Peaxi162Scf00089g00016 Petunia axillaris HOM05D008631 ORTHO05D010718 5.8e-07 59.3 94 37.2
Glyma.04G197200 Glycine max HOM05D008631 ORTHO05D010718 8.4e-06 55.5 169 33.1


User provided reference genes

Program Settings