Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 5.8e-115 417.5 208 100.0
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 3.3e-94 348.6 228 81.6
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 1.5e-86 323.2 226 74.3
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 2.8e-85 318.9 226 73.9
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 4.8e-85 318.2 208 77.4
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 1.1e-84 317.0 225 74.2
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 1.8e-84 316.2 226 72.1
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 3.1e-84 315.5 225 73.8
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 4.1e-84 315.1 226 72.6
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 4.1e-84 315.1 225 73.8
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 5.3e-84 314.7 209 78.5
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 7.0e-84 314.3 225 73.3
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 1.2e-83 313.5 230 72.2
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 1.6e-83 313.2 225 72.0
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.6e-83 313.2 226 72.1
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 4.5e-83 311.6 226 72.1
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 4.5e-83 311.6 226 72.1
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 7.7e-83 310.8 226 71.7
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 1.7e-82 309.7 226 72.6
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 1.7e-82 309.7 229 73.4
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 3.8e-82 308.5 226 71.7
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 5.0e-82 308.1 226 69.5
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 8.5e-82 307.4 230 70.9
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 1.1e-81 307.0 228 71.5
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 1.9e-81 306.2 225 72.4
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 2.5e-81 305.8 226 70.4
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 1.4e-79 300.1 226 69.5
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 1.4e-79 300.1 252 65.5
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 3.0e-79 298.9 229 69.9
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 3.0e-79 298.9 208 73.1
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 5.2e-79 298.1 226 69.0
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 2.0e-78 296.2 226 68.6
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 2.6e-78 295.8 226 67.3
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 2.6e-78 295.8 225 67.6
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 5.7e-78 294.7 223 68.2
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 7.5e-78 294.3 227 67.0
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 9.7e-78 293.9 226 68.1
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 2.2e-77 292.7 230 66.1
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 2.8e-77 292.4 225 68.0
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 1.1e-76 290.4 228 67.5
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 1.1e-76 290.4 228 68.0
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 1.4e-76 290.0 226 67.7
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 2.4e-76 289.3 226 67.7
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 3.1e-76 288.9 225 66.7
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 3.1e-76 288.9 225 66.7
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 3.1e-76 288.9 225 66.7
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 3.1e-76 288.9 225 66.7
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 3.1e-76 288.9 226 66.4
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 4.1e-76 288.5 229 66.4
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 9.1e-76 287.3 228 64.9
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 1.2e-75 287.0 226 67.3
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 1.2e-75 287.0 226 66.8
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 1.6e-75 286.6 225 66.2
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 1.6e-75 286.6 226 66.8
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 2.0e-75 286.2 226 67.3
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 2.0e-75 286.2 226 66.4
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 3.5e-75 285.4 226 67.3
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 3.5e-75 285.4 237 65.4
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 5.9e-75 284.6 228 66.7
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 5.9e-75 284.6 226 66.8
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 1.3e-74 283.5 226 65.9
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 1.7e-74 283.1 228 64.9
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 2.2e-74 282.7 227 65.6
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 2.9e-74 282.3 212 70.3
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 2.9e-74 282.3 224 66.5
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 2.9e-74 282.3 226 67.3
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 2.9e-74 282.3 226 67.3
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 5.0e-74 281.6 231 64.9
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 8.5e-74 280.8 229 65.9
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 2.5e-73 279.3 241 63.5
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 7.2e-73 277.7 228 64.5
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 1.2e-72 276.9 230 67.0
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 2.1e-72 276.2 227 65.6
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 2.7e-72 275.8 225 63.6
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 4.7e-72 275.0 247 61.1
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 8.0e-72 274.2 233 63.5
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 2.3e-71 272.7 261 58.2
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 6.8e-71 271.2 226 62.8
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 2.0e-70 269.6 244 60.2
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 2.6e-70 269.2 232 63.4
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 3.4e-70 268.9 209 66.5
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 3.4e-70 268.9 228 60.5
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 8.3e-69 264.2 212 67.0
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 2.4e-68 262.7 227 63.0
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 4.1e-68 261.9 209 64.1
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 1.2e-67 260.4 210 66.2
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 1.6e-67 260.0 213 64.3
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 2.0e-67 259.6 231 59.3
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 1.0e-66 257.3 213 62.9
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 1.7e-66 256.5 209 64.1
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 1.7e-66 256.5 208 64.4
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.9e-65 253.1 238 56.7
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 6.8e-63 244.6 209 62.7
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 2.6e-62 242.7 208 62.0
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 7.5e-62 241.1 206 60.7
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 2.8e-61 239.2 236 56.4
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 1.3e-58 230.3 209 63.2
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 1.5e-57 226.9 157 73.2
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 1.9e-57 226.5 159 72.3
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 7.3e-57 224.6 206 59.2
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 8.9e-55 217.6 152 71.1
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 1.3e-53 213.8 174 60.3
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 1.7e-53 213.4 175 60.6
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 4.1e-52 208.8 209 58.9
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 2.7e-51 206.1 236 51.3
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 4.3e-49 198.7 335 41.2
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 2.0e-46 189.9 146 64.4
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 1.2e-43 180.6 170 51.8
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 1.7e-42 176.8 142 66.9
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 3.6e-40 169.1 123 69.1
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 9.9e-38 161.0 128 57.0
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 2.8e-32 142.9 125 56.8
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 1.1e-28 131.0 157 41.4
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 2.7e-27 126.3 63 88.9
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 5.6e-25 118.6 134 48.5
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.5e-22 110.5 91 62.6
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 3.5e-19 99.4 118 46.6
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 2.9e-13 79.7 45 75.6
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 5.4e-12 75.5 54 70.4
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 3.0e-10 69.7 83 45.8
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 5.1e-10 68.9 123 39.8


User provided reference genes

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