Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G097700 Populus trichocarpa HOM05D006033 ORTHO05D007112 1.3e-94 349.7 181 100.0
Sabra15G0117100 Salix brachista HOM05D006033 ORTHO05D007112 4.0e-51 205.3 112 90.2
Potri.015G096300 Populus trichocarpa HOM05D006033 ORTHO05D007112 1.7e-49 199.9 112 89.3
GSVIVG01008543001 Vitis vinifera HOM05D006033 ORTHO05D007112 1.0e-46 190.7 112 83.0
Cfa018795 Carpinus fangiana HOM05D006033 ORTHO05D007112 1.1e-45 187.2 117 79.5
MD06G1141900 Malus domestica HOM05D006033 ORTHO05D007112 1.5e-45 186.8 117 79.5
MD14G1157100 Malus domestica HOM05D006033 ORTHO05D007112 3.3e-45 185.7 117 78.6
MELO3C002361.2 Cucumis melo HOM05D006033 ORTHO05D007112 4.2e-45 185.3 117 80.3
ClCG03G003760 Citrullus lanatus HOM05D006033 ORTHO05D007112 1.2e-44 183.7 117 80.3
CsaV3_1G009650 Cucumis sativus L. HOM05D006033 ORTHO05D007112 1.2e-44 183.7 117 80.3
Haze_07138 Corylus avellana HOM05D006033 ORTHO05D007112 2.1e-44 183.0 117 77.8
TWI23G0550 Tripterygium wilfordii HOM05D006033 ORTHO05D007112 2.1e-44 183.0 112 81.2
QL10p002899 Quercus lobata HOM05D006033 ORTHO05D007112 4.7e-44 181.8 117 77.8
Manes.06G119600 Manihot esculenta HOM05D006033 ORTHO05D007112 6.1e-44 181.4 109 83.5
Eucgr.K02726 Eucalyptus grandis HOM05D006033 ORTHO05D007112 8.0e-44 181.0 109 80.7
PGR044G2394 Punica granatum HOM05D006033 ORTHO05D007112 1.8e-43 179.9 130 74.6
Sed0010085 Sechium edule HOM05D006033 ORTHO05D007112 4.0e-43 178.7 117 78.6
COL.COLO4_28129 Corchorus olitorius HOM05D006033 ORTHO05D007112 5.2e-43 178.3 113 80.5
Sc10g0010470 Simmondsia chinensis HOM05D006033 ORTHO05D007112 5.2e-43 178.3 112 77.7
CiPaw.12G043200 Carya illinoinensis HOM05D006033 ORTHO05D007112 6.8e-43 177.9 117 76.9
CANSAT80G2253 Cannabis sativa HOM05D006033 ORTHO05D007112 8.9e-43 177.6 112 77.7
Cpa.g.sc13.116 Carica papaya HOM05D006033 ORTHO05D007112 2.6e-42 176.0 112 76.8
Prupe.5G151100 Prunus persica HOM05D006033 ORTHO05D007112 2.6e-42 176.0 118 76.3
Lj1g0005507 Lotus japonicus HOM05D006033 ORTHO05D007112 3.4e-42 175.6 112 75.9
Ca_16046_v3 Cicer arietinum L. HOM05D006033 ORTHO05D007112 4.4e-42 175.3 112 75.9
Actinidia08871 Actinidia chinensis HOM05D006033 ORTHO05D007112 5.7e-42 174.9 117 76.1
arahy.Tifrunner.gnm1.ann1.YV4Q3G Arachis hypogaea HOM05D006033 ORTHO05D007112 5.7e-42 174.9 112 75.9
Duzib205G1080 Durio zibethinus HOM05D006033 ORTHO05D007112 9.8e-42 174.1 113 77.9
Hund02441 Selenicereus undatus HOM05D006033 ORTHO05D007112 9.8e-42 174.1 117 74.4
Medtr2g045230 Medicago truncatula HOM05D006033 ORTHO05D007112 1.7e-41 173.3 112 74.1
Medtr3g099240 Medicago truncatula HOM05D006033 ORTHO05D007112 1.7e-41 173.3 112 74.1
arahy.Tifrunner.gnm1.ann1.Z456W4 Arachis hypogaea HOM05D006033 ORTHO05D007112 2.2e-41 172.9 112 75.9
TAR374G1541 Trochodendron aralioides HOM05D006033 ORTHO05D007112 2.2e-41 172.9 113 77.0
Ciclev10031478m.g Citrus clementina HOM05D006033 ORTHO05D007112 2.8e-41 172.6 112 76.8
RcHm_v2.0_Chr7g0190201 Rosa chinensis HOM05D006033 ORTHO05D007112 3.7e-41 172.2 118 74.6
FAN08G2192 Fragaria x ananassa HOM05D006033 ORTHO05D007112 4.9e-41 171.8 118 75.4
TPR.G14208 Trifolium pratense HOM05D006033 ORTHO05D007112 4.9e-41 171.8 112 75.0
FAN13G1806 Fragaria x ananassa HOM05D006033 ORTHO05D007112 6.3e-41 171.4 118 74.6
AUR62034824 Chenopodium quinoa HOM05D006033 ORTHO05D007112 1.4e-40 170.2 117 72.6
FAN04G2747 Fragaria x ananassa HOM05D006033 ORTHO05D007112 1.4e-40 170.2 118 74.6
FAN18G2263 Fragaria x ananassa HOM05D006033 ORTHO05D007112 1.4e-40 170.2 118 74.6
Nn4g22317 Nelumbo nucifera HOM05D006033 ORTHO05D007112 1.4e-40 170.2 118 75.4
Thecc.03G129200 Theobroma cacao HOM05D006033 ORTHO05D007112 1.4e-40 170.2 153 62.7
Cc03_g15140 Coffea canephora HOM05D006033 ORTHO05D007112 2.4e-40 169.5 112 75.0
Gohir.A12G189600 Gossypium hirsutum HOM05D006033 ORTHO05D007112 2.4e-40 169.5 115 76.5
Lalb_Chr08g0237161 Lupinus albus HOM05D006033 ORTHO05D007112 4.1e-40 168.7 112 72.3
FvH4_5g08320 Fragaria vesca HOM05D006033 ORTHO05D007112 5.4e-40 168.3 130 67.7
AUR62029613 Chenopodium quinoa HOM05D006033 ORTHO05D007112 7.0e-40 167.9 117 71.8
A10p04060 Brassica napus HOM05D006033 ORTHO05D007112 9.2e-40 167.5 111 77.5
BraA10t42677Z Brassica rapa HOM05D006033 ORTHO05D007112 9.2e-40 167.5 111 77.5
Psat5g051280 Pisum sativum HOM05D006033 ORTHO05D007112 9.2e-40 167.5 113 72.6
BcaC07g42135 Brassica carinata HOM05D006033 ORTHO05D007112 1.2e-39 167.2 111 76.6
Peaxi162Scf00089g00624 Petunia axillaris HOM05D006033 ORTHO05D007112 1.2e-39 167.2 112 72.3
Actinidia36806 Actinidia chinensis HOM05D006033 ORTHO05D007112 1.6e-39 166.8 117 74.4
Aqoxy5G03378 Aquilegia oxysepala HOM05D006033 ORTHO05D007112 1.6e-39 166.8 118 73.7
Thhalv10007699m.g Eutrema salsugineum HOM05D006033 ORTHO05D007112 2.0e-39 166.4 111 75.7
CSS0003528 Camellia sinensis var. sinensis HOM05D006033 ORTHO05D007112 2.7e-39 166.0 117 72.6
Sp1g04220 Schrenkiella parvula HOM05D006033 ORTHO05D007112 2.7e-39 166.0 115 72.2
Gohir.D12G192000 Gossypium hirsutum HOM05D006033 ORTHO05D007112 3.5e-39 165.6 116 74.1
Atru.chr6.1793 Acer truncatum HOM05D006033 ORTHO05D007112 4.5e-39 165.2 113 74.3
CARHR004850 Cardamine hirsuta HOM05D006033 ORTHO05D007112 4.5e-39 165.2 115 73.9
Glyma.17G130200 Glycine max HOM05D006033 ORTHO05D007112 4.5e-39 165.2 112 73.2
Phvul.003G211200 Phaseolus vulgaris HOM05D006033 ORTHO05D007112 4.5e-39 165.2 112 73.2
VMungo1215G0762 Vigna mungo HOM05D006033 ORTHO05D007112 4.5e-39 165.2 112 73.2
AT1G05350 Arabidopsis thaliana HOM05D006033 ORTHO05D007112 1.0e-38 164.1 115 73.0
A09p67480 Brassica napus HOM05D006033 ORTHO05D007112 1.0e-38 164.1 116 73.3
BraA09t42076Z Brassica rapa HOM05D006033 ORTHO05D007112 1.0e-38 164.1 112 75.0
C05p03680 Brassica napus HOM05D006033 ORTHO05D007112 1.3e-38 163.7 111 75.7
BolC5t29145H Brassica oleracea HOM05D006033 ORTHO05D007112 1.3e-38 163.7 111 75.7
Glyma.05G048200 Glycine max HOM05D006033 ORTHO05D007112 1.3e-38 163.7 112 74.1
PSO478G4249 Papaver somniferum HOM05D006033 ORTHO05D007112 1.3e-38 163.7 120 70.8
C08p51760 Brassica napus HOM05D006033 ORTHO05D007112 1.7e-38 163.3 112 72.3
BolC8t52705H Brassica oleracea HOM05D006033 ORTHO05D007112 1.7e-38 163.3 112 72.3
AL1G15150 Arabidopsis lyrata HOM05D006033 ORTHO05D007112 2.3e-38 162.9 115 72.2
Nitab4.5_0004750g0050 Nicotiana tabacum HOM05D006033 ORTHO05D007112 3.9e-38 162.2 112 69.6
Ah.02g114900 Amaranthus hybridus HOM05D006033 ORTHO05D007112 6.6e-38 161.4 104 76.0
Sopen03g030470 Solanum pennellii HOM05D006033 ORTHO05D007112 6.6e-38 161.4 112 70.5
HanXRQChr05g0155041 Helianthus annuus HOM05D006033 ORTHO05D007112 8.6e-38 161.0 133 66.2
EL10Ac5g11413 Beta vulgaris HOM05D006033 ORTHO05D007112 1.1e-37 160.6 134 64.2
THA.LOC104811587 Tarenaya hassleriana HOM05D006033 ORTHO05D007112 1.1e-37 160.6 113 72.6
Solyc03g111340.4 Solanum lycopersicum HOM05D006033 ORTHO05D007112 1.5e-37 160.2 112 69.6
PGSC0003DMG401015240 Solanum tuberosum HOM05D006033 ORTHO05D007112 1.5e-37 160.2 112 70.5
Carub.0001s0469 Capsella rubella HOM05D006033 ORTHO05D007112 1.9e-37 159.8 118 69.5
Lsat_1_v5_gn_5_13720 Lactuca sativa HOM05D006033 ORTHO05D007112 1.9e-37 159.8 112 71.4
MSTRG.1619 Avicennia marina HOM05D006033 ORTHO05D007112 2.5e-37 159.5 108 74.1
PSO017G2963 Papaver somniferum HOM05D006033 ORTHO05D007112 2.5e-37 159.5 124 68.5
Os02g0506500 Oryza sativa ssp. japonica HOM05D006033 ORTHO05D007112 4.3e-37 158.7 111 69.4
CDE02G1207 Ceratophyllum demersum HOM05D006033 ORTHO05D007112 9.5e-37 157.5 112 68.8
Lj5A96T53 Lonicera japonica HOM05D006033 ORTHO05D007112 1.2e-36 157.1 117 68.4
Gorai.008G206300 Gossypium raimondii HOM05D006033 ORTHO05D007112 2.8e-36 156.0 116 69.8
CAN.G352.14 Capsicum annuum HOM05D006033 ORTHO05D007112 4.7e-36 155.2 112 67.9
TAR622G1220 Trochodendron aralioides HOM05D006033 ORTHO05D007112 4.7e-36 155.2 92 81.5
TAR027G0002 Trochodendron aralioides HOM05D000369 ORTHO05D000253 8.0e-36 154.5 108 73.1
vmacro16716 Vaccinium macrocarpon HOM05D006033 ORTHO05D007112 8.0e-36 154.5 115 68.7
Migut.E01431 Erythranthe guttata HOM05D006033 ORTHO05D007112 1.8e-35 153.3 117 67.5
TWI39G0081 Tripterygium wilfordii HOM05D006033 ORTHO05D007112 1.5e-34 150.2 113 69.9
unitig_46.g18225 Utricularia gibba HOM05D006033 ORTHO05D007112 2.6e-34 149.4 129 63.6
ATR0561G152 Amborella trichopoda HOM05D006033 ORTHO05D007112 3.4e-34 149.1 104 68.3
HPP92_007005 Vanilla planifolia HOM05D006033 ORTHO05D007112 4.4e-34 148.7 113 69.9
Zm00001eb241690 Zea mays HOM05D006033 ORTHO05D007112 4.4e-34 148.7 117 65.8
Oeu032516.1 Olea europaea HOM05D006033 ORTHO05D007112 1.7e-33 146.7 93 77.4
SMO364G0767 Selaginella moellendorffii HOM05D006033 ORTHO05D007112 3.5e-31 139.0 103 62.1
Pp3c7_23140 Physcomitrium patens HOM05D006033 ORTHO05D007112 1.7e-30 136.7 118 61.0
DCAR_021619 Daucus carota HOM05D006033 ORTHO05D007112 3.6e-28 129.0 92 67.4
Mapoly0009s0069 Marchantia polymorpha HOM05D006033 ORTHO05D007112 3.6e-28 129.0 105 59.0
Lj9A479G53 Lonicera japonica HOM05D006033 ORTHO05D007112 2.0e-26 123.2 89 68.5
SGA_v2.0_scaffold121G33024 Striga asiatica HOM05D006033 ORTHO05D007112 5.8e-26 121.7 83 68.7
Nitab4.5_0003282g0110 Nicotiana tabacum HOM05D006033 ORTHO05D007112 1.3e-25 120.6 87 65.5
Gohir.D07G055650 Gossypium hirsutum HOM05D006033 ORTHO05D007112 3.7e-25 119.0 111 57.7
MBI16_g07739_MAGBIO Magnolia biondii HOM05D006033 ORTHO05D007112 3.7e-25 119.0 85 69.4
SalBow8G5593 Salvia bowleyana HOM05D006033 ORTHO05D007112 1.9e-24 116.7 106 59.4
Oeu008768.2 Olea europaea HOM05D005002 ORTHO05D006016 2.7e-23 112.8 79 70.9
Dinv11172 Davidia involucrata HOM05D006033 ORTHO05D007112 2.5e-21 106.3 55 85.5
PRCOL_00005996 Prasinoderma coloniale HOM05D006033 ORTHO05D007112 5.8e-18 95.1 104 49.0
Cre13.g582350 Chlamydomonas reinhardtii HOM05D006033 ORTHO05D007112 8.3e-17 91.3 114 46.5
Haze_26394 Corylus avellana HOM05D006033 ORTHO05D007112 1.9e-16 90.1 137 36.5
Aa31LG1G19340 Aethionema arabicum HOM05D006033 ORTHO05D007112 7.1e-16 88.2 112 47.3
SEGI_30811 Sequoiadendron giganteum HOM05D006033 ORTHO05D007112 2.5e-13 79.7 67 59.7
CANSAT80G2043 Cannabis sativa HOM05D006033 ORTHO05D007112 3.3e-13 79.3 58 70.7
TAR376G0865 Trochodendron aralioides HOM05D006033 ORTHO05D007112 3.0e-06 56.2 38 68.4


User provided reference genes

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