Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G097500 Populus trichocarpa HOM05D007169 ORTHO05D007243 2.9e-132 475.3 254 100.0
Potri.015G096000 Populus trichocarpa HOM05D007169 ORTHO05D007243 2.5e-112 409.1 255 85.5
Sabra15G0116800 Salix brachista HOM05D007169 ORTHO05D007243 1.7e-108 396.4 254 81.1
Manes.01G190300 Manihot esculenta HOM05D007169 ORTHO05D007243 2.5e-96 355.9 252 74.6
Duzib068G0521 Durio zibethinus HOM05D007169 ORTHO05D007243 1.6e-85 320.1 249 65.5
Thecc.03G128900 Theobroma cacao HOM05D007169 ORTHO05D007243 7.7e-85 317.8 250 64.8
Gohir.D09G247400 Gossypium hirsutum HOM05D007169 ORTHO05D007243 5.0e-84 315.1 251 64.5
Gorai.006G271900 Gossypium raimondii HOM05D007169 ORTHO05D007243 5.0e-84 315.1 251 64.5
Gohir.A09G246900 Gossypium hirsutum HOM05D007169 ORTHO05D007243 4.2e-83 312.0 251 64.1
TWI23G0849 Tripterygium wilfordii HOM05D007169 ORTHO05D007243 2.6e-80 302.8 259 64.9
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 4.4e-80 302.0 231 66.7
Prupe.5G151300 Prunus persica HOM05D007169 ORTHO05D007243 1.7e-79 300.1 263 61.6
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea HOM05D007169 ORTHO05D007243 2.8e-79 299.3 222 66.2
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea HOM05D007169 ORTHO05D007243 2.8e-79 299.3 222 66.2
Glyma.06G170200 Glycine max HOM05D007169 ORTHO05D007243 2.4e-78 296.2 225 65.3
Phvul.009G166500 Phaseolus vulgaris HOM05D007169 ORTHO05D007243 2.7e-77 292.7 222 64.9
Psat5g051240 Pisum sativum HOM05D007169 ORTHO05D007243 5.9e-77 291.6 227 67.4
Lj1g0026378 Lotus japonicus HOM05D007169 ORTHO05D007243 5.0e-76 288.5 223 65.0
Cpa.g.sc13.118 Carica papaya HOM05D007169 ORTHO05D007243 1.5e-75 287.0 218 65.6
Atru.chr9.1127 Acer truncatum HOM05D007169 ORTHO05D007243 1.9e-75 286.6 266 62.4
Ca_16044_v3 Cicer arietinum L. HOM05D007169 ORTHO05D007243 4.2e-75 285.4 226 66.8
TPR.G14220 Trifolium pratense HOM05D007169 ORTHO05D007243 1.2e-74 283.9 225 64.9
FvH4_5g08300 Fragaria vesca HOM05D007169 ORTHO05D007243 2.3e-73 279.6 218 61.9
CsaV3_1G009620 Cucumis sativus L. HOM05D007169 ORTHO05D007243 5.2e-73 278.5 263 58.6
Medtr3g099350 Medicago truncatula HOM05D007169 ORTHO05D007243 5.2e-73 278.5 227 63.0
RcHm_v2.0_Chr7g0190221 Rosa chinensis HOM05D007169 ORTHO05D007243 8.8e-73 277.7 219 63.5
MELO3C002358.2 Cucumis melo HOM05D007169 ORTHO05D007243 4.4e-72 275.4 268 57.5
Eucgr.K02727 Eucalyptus grandis HOM05D007169 ORTHO05D007243 5.7e-72 275.0 227 63.0
FAN04G2393 Fragaria x ananassa HOM05D007169 ORTHO05D007243 7.5e-72 274.6 226 61.1
FAN18G0310 Fragaria x ananassa HOM05D007169 ORTHO05D007243 1.7e-71 273.5 223 60.5
CANSAT80G1416 Cannabis sativa HOM05D007169 ORTHO05D007243 8.3e-71 271.2 238 60.5
Lalb_Chr08g0237141 Lupinus albus HOM05D007169 ORTHO05D007243 3.1e-70 269.2 223 61.4
MD14G1157400 Malus domestica HOM05D007169 ORTHO05D007243 7.0e-70 268.1 263 53.6
Sed0023866 Sechium edule HOM05D007169 ORTHO05D007243 7.0e-70 268.1 227 59.0
ClCG03G003730 Citrullus lanatus HOM05D007169 ORTHO05D007243 9.1e-70 267.7 261 58.2
MD06G1142100 Malus domestica HOM05D007169 ORTHO05D007243 9.1e-70 267.7 258 53.9
Gorai.004G276100 Gossypium raimondii HOM05D007169 ORTHO05D007243 1.2e-69 267.3 205 64.4
CiPaw.12G042700 Carya illinoinensis HOM05D007169 ORTHO05D007243 1.6e-69 266.9 249 56.6
Aa31LG3G6930 Aethionema arabicum HOM05D007169 ORTHO05D007243 8.5e-68 261.2 251 57.4
PGR044G0546 Punica granatum HOM05D007169 ORTHO05D007243 4.2e-67 258.8 218 59.2
Thhalv10014456m.g Eutrema salsugineum HOM05D007169 ORTHO05D007243 1.6e-66 256.9 259 54.8
Sp6g12560 Schrenkiella parvula HOM05D007169 ORTHO05D007243 2.7e-66 256.1 258 54.3
SpUn0015_0080 Schrenkiella parvula HOM05D007169 ORTHO05D007243 2.7e-66 256.1 258 54.3
SpUn0039_0020 Schrenkiella parvula HOM05D007169 ORTHO05D007243 2.7e-66 256.1 258 54.3
THA.LOC104803148 Tarenaya hassleriana HOM05D007169 ORTHO05D007243 4.7e-66 255.4 258 56.2
Carub.0008s1052 Capsella rubella HOM05D007169 ORTHO05D007243 1.4e-65 253.8 227 59.0
BolC2t08225H Brassica oleracea HOM05D007169 ORTHO05D007243 2.3e-65 253.1 253 53.8
QL10p002966 Quercus lobata HOM05D007169 ORTHO05D007243 2.3e-65 253.1 257 54.9
BcaC03g14651 Brassica carinata HOM05D007169 ORTHO05D007243 3.0e-65 252.7 253 53.8
AL8G24630 Arabidopsis lyrata HOM05D007169 ORTHO05D007243 5.2e-65 251.9 227 58.6
AT5G50410 Arabidopsis thaliana HOM05D007169 ORTHO05D007243 1.5e-64 250.4 227 58.1
BcaB05g24052 Brassica carinata HOM05D007169 ORTHO05D007243 2.6e-64 249.6 255 53.3
A02p12790 Brassica napus HOM05D007169 ORTHO05D007243 3.4e-64 249.2 224 57.6
BraA02t06336Z Brassica rapa HOM05D007169 ORTHO05D007243 3.4e-64 249.2 224 57.6
RhsimUnG0231000 Rhododendron simsii HOM05D007169 ORTHO05D007243 4.4e-64 248.8 222 56.8
C02p20850 Brassica napus HOM05D007169 ORTHO05D007243 1.3e-63 247.3 247 53.8
VMungo1309G2045 Vigna mungo HOM05D007169 ORTHO05D007243 1.2e-61 240.7 176 65.3
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla HOM05D007169 ORTHO05D007243 4.5e-61 238.8 208 56.2
Gohir.D12G191801 Gossypium hirsutum HOM05D007169 ORTHO05D007243 5.9e-61 238.4 203 59.6
Gorai.008G206100 Gossypium raimondii HOM05D007169 ORTHO05D007243 1.3e-60 237.3 203 59.6
TAR374G1569 Trochodendron aralioides HOM05D007169 ORTHO05D007243 2.3e-60 236.5 244 52.0
Nn3g16473 Nelumbo nucifera HOM05D007169 ORTHO05D007243 2.5e-59 233.0 225 52.4
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 2.5e-59 233.0 217 59.0
Medtr2g045120 Medicago truncatula HOM05D007169 ORTHO05D007243 9.5e-59 231.1 176 64.8
Medtr2g445400 Medicago truncatula HOM05D007169 ORTHO05D007243 9.5e-59 231.1 176 64.8
Sed0005692 Sechium edule HOM05D007169 ORTHO05D007243 6.1e-58 228.4 250 54.0
Gohir.D08G258666 Gossypium hirsutum HOM05D007169 ORTHO05D007243 5.2e-57 225.3 149 70.5
Cfa018798 Carpinus fangiana HOM05D007169 ORTHO05D007243 1.5e-56 223.8 211 55.0
Haze_07134 Corylus avellana HOM05D007169 ORTHO05D007243 2.6e-56 223.0 211 55.0
Lsat_1_v5_gn_1_28980 Lactuca sativa HOM05D007169 ORTHO05D007243 2.6e-56 223.0 224 51.3
TAR371G0734 Trochodendron aralioides HOM05D007169 ORTHO05D007243 7.5e-56 221.5 224 51.8
CANSAT80G0844 Cannabis sativa HOM05D007169 ORTHO05D007243 1.1e-54 217.6 151 70.2
TAR622G0369 Trochodendron aralioides HOM05D007169 ORTHO05D007243 1.1e-54 217.6 245 47.8
Sc04g0000670 Simmondsia chinensis HOM05D007169 ORTHO05D007243 1.8e-54 216.9 228 51.8
Actinidia18344 Actinidia chinensis HOM05D007169 ORTHO05D007243 4.1e-54 215.7 155 67.7
COL.COLO4_28120 Corchorus olitorius HOM05D007169 ORTHO05D007243 5.4e-54 215.3 249 49.8
Dinv23144 Davidia involucrata HOM05D007169 ORTHO05D007243 3.5e-53 212.6 170 62.4
HanXRQChr02g0034741 Helianthus annuus HOM05D007169 ORTHO05D007243 7.8e-53 211.5 218 48.6
Lalb_Chr23g0273701 Lupinus albus HOM05D007169 ORTHO05D007243 2.3e-52 209.9 203 53.2
CSS0048648 Camellia sinensis var. sinensis HOM05D007169 ORTHO05D007243 1.5e-51 207.2 151 68.2
ECA247G3219 Erigeron canadensis HOM05D007169 ORTHO05D007243 1.9e-51 206.8 223 49.3
Rhsim08G0190100 Rhododendron simsii HOM05D007169 ORTHO05D007243 7.3e-51 204.9 222 51.4
vmacro07808 Vaccinium macrocarpon HOM05D007169 ORTHO05D007243 1.4e-49 200.7 311 40.2
CARHR257950 Cardamine hirsuta HOM05D007169 ORTHO05D007243 3.2e-46 189.5 259 43.6
Lj5A96T48 Lonicera japonica HOM05D007169 ORTHO05D007243 1.2e-45 187.6 145 62.8
Sopen03g031630 Solanum pennellii HOM05D007169 ORTHO05D007243 1.6e-45 187.2 141 67.4
Solyc03g112570.2 Solanum lycopersicum HOM05D007169 ORTHO05D007243 2.7e-45 186.4 141 67.4
PGSC0003DMG400018172 Solanum tuberosum HOM05D007169 ORTHO05D007243 2.7e-45 186.4 141 67.4
DCAR_021617 Daucus carota HOM05D007169 ORTHO05D007243 7.8e-45 184.9 208 48.1
Sabra12G0071300 Salix brachista HOM05D000677 ORTHO05D000727 7.8e-45 184.9 148 67.6
PSO478G3704 Papaver somniferum HOM05D007169 ORTHO05D007243 1.0e-44 184.5 264 42.4
Cc06_g22780 Coffea canephora HOM05D007169 ORTHO05D007243 5.0e-44 182.2 140 67.1
DCAR_016391 Daucus carota HOM05D007169 ORTHO05D007243 1.1e-43 181.0 176 52.3
PSO017G4677 Papaver somniferum HOM05D007169 ORTHO05D007243 2.5e-43 179.9 267 40.4
SalBow5G4624 Salvia bowleyana HOM05D007169 ORTHO05D007243 3.3e-43 179.5 142 66.9
Peaxi162Scf00089g01624 Petunia axillaris HOM05D007169 ORTHO05D007243 7.3e-43 178.3 142 63.4
SalBow5G3517 Salvia bowleyana HOM05D007169 ORTHO05D007243 1.6e-42 177.2 142 66.2
CAN.G338.2 Capsicum annuum HOM05D007169 ORTHO05D007243 4.7e-42 175.6 141 63.1
MSTRG.11390 Avicennia marina HOM05D007169 ORTHO05D007243 8.1e-42 174.9 142 64.8
Oeu006492.1 Olea europaea HOM05D007169 ORTHO05D007243 1.4e-41 174.1 144 62.5
AUR62029615 Chenopodium quinoa HOM05D007169 ORTHO05D007243 4.4e-40 169.1 141 61.0
SGA_v2.0_scaffold56G20032 Striga asiatica HOM05D007169 ORTHO05D007243 4.4e-40 169.1 141 64.5
HPP92_011766 Vanilla planifolia HOM05D007169 ORTHO05D007243 5.8e-40 168.7 199 45.7
Migut.I00155 Erythranthe guttata HOM05D007169 ORTHO05D007243 7.5e-40 168.3 141 61.0
EL10Ac5g11418 Beta vulgaris HOM05D007169 ORTHO05D007243 9.8e-40 167.9 147 62.6
HPP92_011770 Vanilla planifolia HOM05D007169 ORTHO05D007243 2.2e-39 166.8 277 37.5
FAN08G0105 Fragaria x ananassa HOM05D007169 ORTHO05D007243 2.9e-39 166.4 127 60.6
Aqoxy3G00802 Aquilegia oxysepala HOM05D007169 ORTHO05D007243 3.7e-39 166.0 221 43.9
ATR0561G062 Amborella trichopoda HOM05D011398 ORTHO05D007243 3.2e-38 162.9 224 40.2
Ah.02g111120 Amaranthus hybridus HOM05D007169 ORTHO05D007243 1.6e-37 160.6 143 60.8
Nitab4.5_0011992g0030 Nicotiana tabacum HOM05D007169 ORTHO05D007243 2.1e-37 160.2 154 54.5
unitig_0.g2530 Utricularia gibba HOM05D007169 ORTHO05D007243 8.9e-33 144.8 149 53.7
Os08g0531200 Oryza sativa ssp. japonica HOM05D011398 ORTHO05D007243 1.9e-30 137.1 226 35.8
Zm00001eb175120 Zea mays HOM05D011398 ORTHO05D007243 3.3e-27 126.3 254 32.7
Hund26053 Selenicereus undatus HOM05D007169 ORTHO05D007243 4.3e-27 125.9 87 71.3
SEGI_24222 Sequoiadendron giganteum HOM05D007169 ORTHO05D007243 2.2e-23 113.6 132 42.4
arahy.Tifrunner.gnm1.ann1.M1N3UH Arachis hypogaea HOM05D002218 ORTHO05D007243 1.6e-21 107.5 64 73.4
Mapoly0022s0039 Marchantia polymorpha HOM05D011398 ORTHO05D007243 9.6e-11 71.6 85 37.6
CBR_g30247 Chara braunii HOM05D011398 ORTHO05D007243 6.2e-10 68.9 84 39.3
CBR_g46730 Chara braunii HOM05D011398 ORTHO05D007243 6.2e-10 68.9 118 36.4
Pp3c9_18230 Physcomitrium patens HOM05D011398 ORTHO05D007243 3.2e-06 56.6 97 29.9
AagrBONN_evm.TU.Sc2ySwM_344.3697 Anthoceros agrestis HOM05D011398 ORTHO05D007243 4.2e-06 56.2 78 37.2


User provided reference genes

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