Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G094000 Populus trichocarpa HOM05D007996 ORTHO05D009821 1.4e-31 139.0 70 100.0
Manes.14G054700 Manihot esculenta HOM05D007996 ORTHO05D009821 3.2e-17 91.3 72 73.6
Duzib084G1431 Durio zibethinus HOM05D007996 ORTHO05D009821 2.1e-16 88.6 68 73.5
Thecc.03G124100 Theobroma cacao HOM05D007996 ORTHO05D009821 1.8e-15 85.5 73 71.2
Manes.06G116300 Manihot esculenta HOM05D007996 ORTHO05D009821 6.7e-15 83.6 72 70.8
Potri.015G091300 Populus trichocarpa HOM05D007996 ORTHO05D009821 3.3e-14 81.3 74 66.2
TWI14G0037 Tripterygium wilfordii HOM05D007996 ORTHO05D009821 9.7e-14 79.7 42 92.9
Cpa.g.sc4.79 Carica papaya HOM05D007996 ORTHO05D009821 2.2e-13 78.6 43 88.4
CiPaw.12G036300 Carya illinoinensis HOM05D007996 ORTHO05D009821 2.8e-13 78.2 69 69.6
QL10p004811 Quercus lobata HOM05D007996 ORTHO05D009821 3.7e-13 77.8 69 68.1
Gohir.A12G188200 Gossypium hirsutum HOM05D007996 ORTHO05D009821 4.8e-13 77.4 67 67.2
Gohir.D12G191000 Gossypium hirsutum HOM05D007996 ORTHO05D009821 4.8e-13 77.4 67 67.2
Gorai.008G204900 Gossypium raimondii HOM05D007996 ORTHO05D009821 4.8e-13 77.4 67 67.2
Atru.chr9.1020 Acer truncatum HOM05D007996 ORTHO05D009821 4.1e-12 74.3 69 63.8
Psat4g063440 Pisum sativum HOM05D007996 ORTHO05D009821 4.1e-12 74.3 40 92.5
Prupe.5G156000 Prunus persica HOM05D007996 ORTHO05D009821 5.3e-12 73.9 41 82.9
CiPaw.11G011200 Carya illinoinensis HOM05D007996 ORTHO05D009821 9.1e-12 73.2 43 88.4
Hma1.2p1_0014F.1_g009860 Hydrangea macrophylla HOM05D007996 ORTHO05D009821 9.1e-12 73.2 42 85.7
Haze_07260 Corylus avellana HOM05D007996 ORTHO05D009821 1.6e-11 72.4 38 92.1
Glyma.17G127600 Glycine max HOM05D007996 ORTHO05D009821 1.6e-11 72.4 39 89.7
Nn4g22432 Nelumbo nucifera HOM05D007996 ORTHO05D009821 1.6e-11 72.4 69 63.8
Lalb_Chr07g0183251 Lupinus albus HOM05D007996 ORTHO05D009821 2.0e-11 72.0 39 89.7
Medtr4g103970 Medicago truncatula HOM05D007996 ORTHO05D009821 2.0e-11 72.0 41 85.4
Phvul.003G208700 Phaseolus vulgaris HOM05D007996 ORTHO05D009821 2.0e-11 72.0 39 89.7
Nn3g16560 Nelumbo nucifera HOM05D007996 ORTHO05D009821 5.9e-11 70.5 44 81.8
TPR.G40415 Trifolium pratense HOM05D007996 ORTHO05D009821 7.7e-11 70.1 39 84.6
CSS0022418 Camellia sinensis var. sinensis HOM05D007996 ORTHO05D009821 1.0e-10 69.7 70 61.4
SalBow5G2505 Salvia bowleyana HOM05D007996 ORTHO05D009821 1.7e-10 68.9 46 78.3
SalBow5G3809 Salvia bowleyana HOM05D007996 ORTHO05D009821 1.7e-10 68.9 46 78.3
Lj4g0006448 Lotus japonicus HOM05D007996 ORTHO05D009821 2.2e-10 68.6 54 68.5
Glyma.05G045400 Glycine max HOM05D007996 ORTHO05D009821 3.8e-10 67.8 39 87.2
Solyc06g071930.1 Solanum lycopersicum HOM05D007996 ORTHO05D009821 5.0e-10 67.4 70 64.3
Sopen06g028210 Solanum pennellii HOM05D007996 ORTHO05D009821 5.0e-10 67.4 70 64.3
PGSC0003DMG400027111 Solanum tuberosum HOM05D007996 ORTHO05D009821 5.0e-10 67.4 70 64.3
Lalb_Chr08g0236981 Lupinus albus HOM05D007996 ORTHO05D009821 6.5e-10 67.0 42 78.6
vmacro19229 Vaccinium macrocarpon HOM05D007996 ORTHO05D009821 1.1e-09 66.2 64 67.2
RcHm_v2.0_Chr7g0190871 Rosa chinensis HOM05D007996 ORTHO05D009821 1.9e-09 65.5 35 88.6
FAN04G1274 Fragaria x ananassa HOM05D007996 ORTHO05D009821 3.2e-09 64.7 35 85.7
FAN08G0192 Fragaria x ananassa HOM05D007996 ORTHO05D009821 3.2e-09 64.7 35 85.7
FAN13G1950 Fragaria x ananassa HOM05D007996 ORTHO05D009821 3.2e-09 64.7 35 85.7
Sed0008862 Sechium edule HOM05D007996 ORTHO05D009821 4.2e-09 64.3 43 74.4
Actinidia25607 Actinidia chinensis HOM05D007996 ORTHO05D009821 5.5e-09 63.9 37 86.5
CAN.G1046.7 Capsicum annuum HOM05D007996 ORTHO05D009821 5.5e-09 63.9 70 62.9
ClCG03G003560 Citrullus lanatus HOM05D007996 ORTHO05D009821 5.5e-09 63.9 43 74.4
FAN18G2201 Fragaria x ananassa HOM05D007996 ORTHO05D009821 7.2e-09 63.5 35 82.9
Phvul.009G168600 Phaseolus vulgaris HOM05D007996 ORTHO05D009821 9.4e-09 63.2 40 80.0
Cc04_g10190 Coffea canephora HOM05D007996 ORTHO05D009821 1.6e-08 62.4 41 82.9
DCAR_007470 Daucus carota HOM05D007996 ORTHO05D009821 1.6e-08 62.4 70 54.3
Rhsim08G0186300 Rhododendron simsii HOM05D007996 ORTHO05D009821 1.6e-08 62.4 34 91.2
Solyc03g110990.1 Solanum lycopersicum HOM05D007996 ORTHO05D009821 1.6e-08 62.4 66 62.1
CsaV3_1G009400 Cucumis sativus L. HOM05D007996 ORTHO05D009821 2.1e-08 62.0 38 84.2
TAR629G0997 Trochodendron aralioides HOM05D007996 ORTHO05D009821 2.1e-08 62.0 45 73.3
MELO3C002341.2 Cucumis melo HOM05D007996 ORTHO05D009821 3.6e-08 61.2 38 84.2
Aqoxy5G03550 Aquilegia oxysepala HOM05D007996 ORTHO05D009821 4.7e-08 60.8 68 61.8
EL10Ac7g18091 Beta vulgaris HOM05D007996 ORTHO05D009821 4.7e-08 60.8 72 56.9
Glyma.04G193300 Glycine max HOM05D007996 ORTHO05D009821 4.7e-08 60.8 40 82.5
Sed0027846 Sechium edule HOM05D007996 ORTHO05D009821 4.7e-08 60.8 41 75.6
Actinidia16189 Actinidia chinensis HOM05D007996 ORTHO05D009821 6.1e-08 60.5 38 81.6
Migut.I00487 Erythranthe guttata HOM05D007996 ORTHO05D009821 6.1e-08 60.5 37 73.0
TWI39G0948 Tripterygium wilfordii HOM05D000063 ORTHO05D008721 8.0e-08 60.1 69 55.1
AUR62001291 Chenopodium quinoa HOM05D007996 ORTHO05D009821 1.0e-07 59.7 68 55.9
Oeu045473.1 Olea europaea HOM05D007996 ORTHO05D009821 1.0e-07 59.7 68 60.3
Carub.0008s1039 Capsella rubella HOM05D013032 ORTHO05D009821 3.0e-07 58.2 66 53.0
COL.COLO4_16835 Corchorus olitorius HOM05D007996 ORTHO05D009821 3.0e-07 58.2 67 61.2
Nitab4.5_0005327g0040 Nicotiana tabacum HOM05D007996 ORTHO05D009821 3.0e-07 58.2 43 74.4
Sp6g12420 Schrenkiella parvula HOM05D013032 ORTHO05D009821 3.0e-07 58.2 67 53.7
AT5G50335 Arabidopsis thaliana HOM05D013032 ORTHO05D009821 5.2e-07 57.4 45 62.2
Oeu037569.1 Olea europaea HOM05D007996 ORTHO05D009821 5.2e-07 57.4 68 58.8
MBI11_g42682_MAGBIO Magnolia biondii HOM05D007996 ORTHO05D009821 6.7e-07 57.0 39 69.2
PGR044G0405 Punica granatum HOM05D007996 ORTHO05D009821 6.7e-07 57.0 66 59.1
BcaB08g35412 Brassica carinata HOM05D013032 ORTHO05D009821 1.2e-06 56.2 65 52.3
CARHR258170 Cardamine hirsuta HOM05D013032 ORTHO05D009821 2.6e-06 55.1 64 54.7
Lj1g0020512 Lotus japonicus HOM05D007996 ORTHO05D009821 2.6e-06 55.1 48 64.6
AUR62025676 Chenopodium quinoa HOM05D007996 ORTHO05D009821 4.4e-06 54.3 68 54.4
BcaC04g20800 Brassica carinata HOM05D013032 ORTHO05D009821 5.7e-06 53.9 65 50.8
A10p08350 Brassica napus HOM05D013032 ORTHO05D009821 5.7e-06 53.9 65 50.8
BolC9t56782H Brassica oleracea HOM05D013032 ORTHO05D009821 5.7e-06 53.9 65 50.8
BraSC37t46169Z Brassica rapa HOM05D013032 ORTHO05D009821 5.7e-06 53.9 65 50.8
MBI06_g40149_MAGBIO Magnolia biondii HOM05D007996 ORTHO05D009821 5.7e-06 53.9 66 56.1
Thhalv10015187m.g Eutrema salsugineum HOM05D013032 ORTHO05D009821 9.7e-06 53.1 65 50.8
Peaxi162Scf00089g00319 Petunia axillaris HOM05D007996 ORTHO05D009821 9.7e-06 53.1 39 74.4


User provided reference genes

Program Settings