Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G090600 Populus trichocarpa HOM05D007328 ORTHO05D009246 2.1e-52 208.8 105 100.0
PGR044G2544 Punica granatum HOM05D007328 ORTHO05D009246 2.1e-36 155.6 104 76.9
Sabra12G0065400 Salix brachista HOM05D007328 ORTHO05D009246 1.8e-35 152.5 81 96.3
Ciclev10022963m.g Citrus clementina HOM05D007328 ORTHO05D009246 3.9e-35 151.4 108 72.2
CANSAT80G1532 Cannabis sativa HOM05D007328 ORTHO05D009246 1.5e-34 149.4 105 72.4
CiPaw.12G033600 Carya illinoinensis HOM05D007328 ORTHO05D009246 2.0e-34 149.1 101 76.2
Haze_07631 Corylus avellana HOM05D007328 ORTHO05D009246 2.0e-34 149.1 105 76.2
QL10p005926 Quercus lobata HOM05D007328 ORTHO05D009246 5.7e-34 147.5 103 75.7
Duzib205G1420 Durio zibethinus HOM05D007328 ORTHO05D009246 1.3e-33 146.4 103 76.7
Prupe.5G161600 Prunus persica HOM05D007328 ORTHO05D009246 6.3e-33 144.1 105 70.5
TWI23G0848 Tripterygium wilfordii HOM05D007328 ORTHO05D009246 6.3e-33 144.1 105 67.6
GSVIVG01007592001 Vitis vinifera HOM05D007328 ORTHO05D009246 6.3e-33 144.1 100 74.0
CSS0000986 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 8.2e-33 143.7 105 70.5
Sc04g0001180 Simmondsia chinensis HOM05D007328 ORTHO05D009246 1.1e-32 143.3 103 71.8
TAR629G2292 Trochodendron aralioides HOM05D007328 ORTHO05D009246 3.1e-32 141.7 103 72.8
FAN04G3262 Fragaria x ananassa HOM05D007328 ORTHO05D009246 4.1e-32 141.4 105 72.4
Dinv38499 Davidia involucrata HOM05D007328 ORTHO05D009246 9.1e-32 140.2 101 71.3
DCAR_007459 Daucus carota HOM05D007328 ORTHO05D009246 1.2e-31 139.8 100 73.0
COL.COLO4_19806 Corchorus olitorius HOM05D007328 ORTHO05D009246 2.0e-31 139.0 103 73.8
RcHm_v2.0_Chr7g0191941 Rosa chinensis HOM05D007328 ORTHO05D009246 2.6e-31 138.7 106 72.6
Duzib068G0271 Durio zibethinus HOM05D007328 ORTHO05D009246 5.9e-31 137.5 101 71.3
Hma1.2p1_2431F.1_g322030 Hydrangea macrophylla HOM05D007328 ORTHO05D009246 5.9e-31 137.5 99 72.7
FvH4_5g06690 Fragaria vesca HOM05D007328 ORTHO05D009246 7.7e-31 137.1 105 70.5
FAN18G0524 Fragaria x ananassa HOM05D007328 ORTHO05D009246 7.7e-31 137.1 105 70.5
Sed0026647 Sechium edule HOM05D007328 ORTHO05D009246 1.0e-30 136.7 105 68.6
Ah.08g218420 Amaranthus hybridus HOM05D007328 ORTHO05D009246 1.3e-30 136.3 104 73.1
FAN13G1360 Fragaria x ananassa HOM05D007328 ORTHO05D009246 1.3e-30 136.3 105 69.5
Aqoxy5G03651 Aquilegia oxysepala HOM05D007328 ORTHO05D009246 1.7e-30 136.0 101 69.3
ClCG06G017550 Citrullus lanatus HOM05D007328 ORTHO05D009246 1.7e-30 136.0 105 69.5
ECA246G4123 Erigeron canadensis HOM05D007328 ORTHO05D009246 1.7e-30 136.0 103 69.9
Rhsim12G0170200 Rhododendron simsii HOM05D007328 ORTHO05D009246 1.7e-30 136.0 105 67.6
Glyma.05G043400 Glycine max HOM05D007328 ORTHO05D009246 2.2e-30 135.6 105 71.4
Gohir.D12G189600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 2.2e-30 135.6 106 68.9
Gorai.008G203400 Gossypium raimondii HOM05D007328 ORTHO05D009246 2.2e-30 135.6 106 68.9
Phvul.003G206900 Phaseolus vulgaris HOM05D007328 ORTHO05D009246 2.9e-30 135.2 105 71.4
THA.LOC104809276 Tarenaya hassleriana HOM05D007328 ORTHO05D009246 2.9e-30 135.2 105 68.6
Carub.0002s1493 Capsella rubella HOM05D007328 ORTHO05D009246 5.0e-30 134.4 101 69.3
CsaV3_1G000900 Cucumis sativus L. HOM05D007328 ORTHO05D009246 5.0e-30 134.4 107 68.2
Gohir.A12G186600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 5.0e-30 134.4 106 68.9
TPR.G37571 Trifolium pratense HOM05D007328 ORTHO05D009246 5.0e-30 134.4 106 67.0
AL2G39190 Arabidopsis lyrata HOM05D007328 ORTHO05D009246 6.5e-30 134.0 101 68.3
AT1G78790 Arabidopsis thaliana HOM05D007328 ORTHO05D009246 6.5e-30 134.0 101 69.3
PSO067G0004 Papaver somniferum HOM05D007328 ORTHO05D009246 6.5e-30 134.0 104 64.4
Sp5g33820 Schrenkiella parvula HOM05D007328 ORTHO05D009246 6.5e-30 134.0 101 69.3
Hund05612 Selenicereus undatus HOM05D007328 ORTHO05D009246 6.5e-30 134.0 105 68.6
MSTRG.4340 Avicennia marina HOM05D007328 ORTHO05D009246 8.5e-30 133.7 105 65.7
BcaB03g16036 Brassica carinata HOM05D004141 ORTHO05D005416 8.5e-30 133.7 100 70.0
Glyma.17G125900 Glycine max HOM05D007328 ORTHO05D009246 1.1e-29 133.3 105 68.6
BcaC08g47455 Brassica carinata HOM05D007328 ORTHO05D009246 2.5e-29 132.1 100 69.0
A07p44000 Brassica napus HOM05D004141 ORTHO05D005416 2.5e-29 132.1 100 69.0
C06p52680 Brassica napus HOM05D004141 ORTHO05D005416 2.5e-29 132.1 100 69.0
BraA07t31907Z Brassica rapa HOM05D007328 ORTHO05D009246 2.5e-29 132.1 100 69.0
Cc04_g10870 Coffea canephora HOM05D007328 ORTHO05D009246 2.5e-29 132.1 103 68.9
Ca_19431_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 3.2e-29 131.7 105 67.6
PSO063G4259 Papaver somniferum HOM05D007328 ORTHO05D009246 4.2e-29 131.3 96 68.8
CARHR072340 Cardamine hirsuta HOM05D007328 ORTHO05D009246 7.2e-29 130.6 103 64.1
Migut.D02033 Erythranthe guttata HOM05D007328 ORTHO05D009246 1.2e-28 129.8 105 64.8
Thecc.03G118600 Theobroma cacao HOM05D007328 ORTHO05D009246 1.2e-28 129.8 103 68.9
Lj4g0027684 Lotus japonicus HOM05D007328 ORTHO05D009246 2.7e-28 128.6 105 64.8
MELO3C026242.2 Cucumis melo HOM05D007328 ORTHO05D009246 3.6e-28 128.3 107 66.4
Lsat_1_v5_gn_3_90700 Lactuca sativa HOM05D007328 ORTHO05D009246 4.7e-28 127.9 103 65.0
Medtr4g104430 Medicago truncatula HOM05D007328 ORTHO05D009246 4.7e-28 127.9 105 64.8
arahy.Tifrunner.gnm1.ann1.RLPB8M Arachis hypogaea HOM05D007328 ORTHO05D009246 8.0e-28 127.1 105 62.9
SGA_v2.0_scaffold7G04170 Striga asiatica HOM05D007328 ORTHO05D009246 8.0e-28 127.1 105 63.8
Lsat_1_v5_gn_5_12821 Lactuca sativa HOM05D007328 ORTHO05D009246 1.4e-27 126.3 103 64.1
CAN.G126.95 Capsicum annuum HOM05D007328 ORTHO05D009246 3.0e-27 125.2 104 63.5
Solyc03g111790.4 Solanum lycopersicum HOM05D007328 ORTHO05D009246 3.0e-27 125.2 104 62.5
Sopen03g030890 Solanum pennellii HOM05D007328 ORTHO05D009246 3.0e-27 125.2 104 62.5
FAN08G2248 Fragaria x ananassa HOM05D007328 ORTHO05D009246 5.2e-27 124.4 122 60.7
Gorai.006G269700 Gossypium raimondii HOM05D007328 ORTHO05D009246 8.8e-27 123.6 106 64.2
Nitab4.5_0003542g0010 Nicotiana tabacum HOM05D007328 ORTHO05D009246 1.1e-26 123.2 104 61.5
PGSC0003DMG400015227 Solanum tuberosum HOM05D007328 ORTHO05D009246 1.1e-26 123.2 104 61.5
Gohir.A09G244400 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.5e-26 122.9 106 64.2
arahy.Tifrunner.gnm1.ann1.VT7US1 Arachis hypogaea HOM05D007328 ORTHO05D009246 2.0e-26 122.5 96 65.6
HPP92_017655 Vanilla planifolia HOM05D007328 ORTHO05D009246 2.0e-26 122.5 103 62.1
Nitab4.5_0000510g0070 Nicotiana tabacum HOM05D007328 ORTHO05D009246 2.6e-26 122.1 104 62.5
Gohir.D09G245301 Gossypium hirsutum HOM05D007328 ORTHO05D009246 9.7e-26 120.2 106 62.3
HanXRQChr08g0235201 Helianthus annuus HOM05D007328 ORTHO05D009246 1.3e-25 119.8 99 61.6
Lalb_Chr07g0183141 Lupinus albus HOM05D007328 ORTHO05D009246 1.3e-25 119.8 105 62.9
SHI17354 Sapria himalayana HOM05D007328 ORTHO05D009246 1.3e-25 119.8 104 65.4
Os04g0481500 Oryza sativa ssp. japonica HOM05D007328 ORTHO05D009246 4.1e-24 114.8 103 61.2
Pp3c15_7370 Physcomitrium patens HOM05D007328 ORTHO05D009246 4.1e-24 114.8 102 55.9
Psat4g062040 Pisum sativum HOM05D007328 ORTHO05D009246 7.0e-24 114.0 90 66.7
SalBow6G3374 Salvia bowleyana HOM05D007328 ORTHO05D009246 9.1e-24 113.6 96 59.4
CDE02G4603 Ceratophyllum demersum HOM05D007328 ORTHO05D009246 1.3e-22 109.8 113 53.1
unitig_62.g23226 Utricularia gibba HOM05D007328 ORTHO05D009246 1.5e-21 106.3 102 53.9
AagrBONN_evm.TU.Sc2ySwM_369.482 Anthoceros agrestis HOM05D007328 ORTHO05D009246 2.5e-21 105.5 108 52.8
vmacro16689 Vaccinium macrocarpon HOM05D007328 ORTHO05D009246 2.5e-21 105.5 68 77.9
BolC6t40286H Brassica oleracea HOM05D007328 ORTHO05D009246 7.2e-21 104.0 82 67.1
Manes.06G112300 Manihot esculenta HOM05D007328 ORTHO05D009246 9.4e-21 103.6 89 64.0
Aa31LG4G2240 Aethionema arabicum HOM05D007328 ORTHO05D009246 2.1e-20 102.4 67 79.1
C03p92780 Brassica napus HOM05D007328 ORTHO05D009246 2.1e-20 102.4 82 65.9
SEGI_23865 Sequoiadendron giganteum HOM05D007328 ORTHO05D009246 1.0e-19 100.1 66 74.2
QL10p005934 Quercus lobata HOM05D007328 ORTHO05D009246 1.4e-19 99.8 64 81.2
Ca_30674_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 2.3e-19 99.0 67 76.1
AUR62001234 Chenopodium quinoa HOM05D007328 ORTHO05D009246 1.5e-18 96.3 64 78.1
Mapoly0166s0013 Marchantia polymorpha HOM05D007328 ORTHO05D009246 5.7e-18 94.4 103 47.6
CSS0030634 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 9.8e-18 93.6 96 56.2
Atru.chr9.1808 Acer truncatum HOM05D007328 ORTHO05D009246 1.8e-16 89.4 105 49.5
Nn3g16640 Nelumbo nucifera HOM05D007328 ORTHO05D009246 4.1e-16 88.2 69 63.8
MBI10_g15972_MAGBIO Magnolia biondii HOM05D007328 ORTHO05D009246 7.0e-16 87.4 53 84.9
ATR0199G045 Amborella trichopoda HOM05D007328 ORTHO05D009246 1.2e-15 86.7 50 88.0
Thhalv10019789m.g Eutrema salsugineum HOM05D007328 ORTHO05D009246 5.9e-15 84.3 52 80.8
Actinidia08840 Actinidia chinensis HOM05D007328 ORTHO05D009246 7.7e-15 84.0 50 82.0
ECA233G5563 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.0e-14 81.3 53 81.1
SMO203G0244 Selaginella moellendorffii HOM05D007328 ORTHO05D009246 5.5e-13 77.8 53 69.8
CSS0039715 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 8.3e-09 63.9 39 79.5
MCO11G116 Micromonas commoda HOM05D007328 ORTHO05D009246 1.8e-08 62.8 104 35.6


User provided reference genes

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