Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G088350 Populus trichocarpa HOM05D005987 ORTHO05D007233 1.4e-75 286.2 141 100.0
Potri.015G080100 Populus trichocarpa HOM05D005987 ORTHO05D007233 2.2e-33 146.0 147 56.5
Sabra15G0104300 Salix brachista HOM05D005987 ORTHO05D007233 2.3e-30 136.0 162 50.0
Nn4g22674 Nelumbo nucifera HOM05D005987 ORTHO05D007233 6.7e-30 134.4 149 51.0
TWI39G0642 Tripterygium wilfordii HOM05D005987 ORTHO05D007233 6.7e-30 134.4 148 50.7
GSVIVG01007695001 Vitis vinifera HOM05D005987 ORTHO05D007233 1.9e-29 132.9 148 50.7
Cfa019170 Carpinus fangiana HOM05D005987 ORTHO05D007233 9.7e-29 130.6 148 48.6
Ciclev10021762m.g Citrus clementina HOM05D005987 ORTHO05D007233 1.3e-28 130.2 147 51.0
TWI14G0473 Tripterygium wilfordii HOM05D005987 ORTHO05D007233 8.2e-28 127.5 148 45.9
Dinv38561 Davidia involucrata HOM05D005987 ORTHO05D007233 1.4e-27 126.7 148 48.6
CiPaw.12G028700 Carya illinoinensis HOM05D005987 ORTHO05D007233 2.4e-27 125.9 148 47.3
RcHm_v2.0_Chr7g0193121 Rosa chinensis HOM05D005987 ORTHO05D007233 4.1e-27 125.2 148 47.3
Sed0001492 Sechium edule HOM05D005987 ORTHO05D007233 4.1e-27 125.2 148 46.6
Atru.chr9.2528 Acer truncatum HOM05D005987 ORTHO05D007233 5.3e-27 124.8 147 50.3
PGR083G1581 Punica granatum HOM05D005987 ORTHO05D007233 5.3e-27 124.8 147 49.7
Thecc.03G019200 Theobroma cacao HOM05D005987 ORTHO05D007233 5.3e-27 124.8 148 50.0
Gorai.006G189900 Gossypium raimondii HOM05D005987 ORTHO05D007233 9.1e-27 124.0 150 46.7
Lj5A126G85 Lonicera japonica HOM05D005987 ORTHO05D007233 9.1e-27 124.0 149 47.7
Peaxi162Scf00089g01737 Petunia axillaris HOM05D005987 ORTHO05D007233 9.1e-27 124.0 147 48.3
CsaV3_1G001340 Cucumis sativus L. HOM05D005987 ORTHO05D007233 1.2e-26 123.6 149 47.7
TAR629G2107 Trochodendron aralioides HOM05D005987 ORTHO05D007233 1.2e-26 123.6 148 48.6
QL10p008901 Quercus lobata HOM05D005987 ORTHO05D007233 1.5e-26 123.2 147 49.0
ClCG06G017140 Citrullus lanatus HOM05D005987 ORTHO05D007233 2.0e-26 122.9 148 45.3
TPR.G37573 Trifolium pratense HOM05D005987 ORTHO05D007233 2.0e-26 122.9 147 46.3
CSS0034112 Camellia sinensis var. sinensis HOM05D005987 ORTHO05D007233 2.6e-26 122.5 149 47.7
MELO3C026282.2 Cucumis melo HOM05D005987 ORTHO05D007233 4.5e-26 121.7 148 45.3
Lalb_Chr12g0201721 Lupinus albus HOM05D005987 ORTHO05D007233 4.5e-26 121.7 149 43.6
CAN.G1166.26 Capsicum annuum HOM05D005987 ORTHO05D007233 5.9e-26 121.3 166 44.0
Dinv20627 Davidia involucrata HOM05D005987 ORTHO05D007233 5.9e-26 121.3 148 46.6
MD06G1170600 Malus domestica HOM05D005987 ORTHO05D007233 5.9e-26 121.3 148 47.3
Medtr4g105460 Medicago truncatula HOM05D005987 ORTHO05D007233 5.9e-26 121.3 147 46.9
Eucgr.B00245 Eucalyptus grandis HOM05D005987 ORTHO05D007233 1.0e-25 120.6 148 46.6
Atru.chr9.2531 Acer truncatum HOM05D005987 ORTHO05D007233 1.3e-25 120.2 150 48.7
FvH4_5g05710 Fragaria vesca HOM05D005987 ORTHO05D007233 1.3e-25 120.2 148 45.3
FAN18G2319 Fragaria x ananassa HOM05D005987 ORTHO05D007233 1.3e-25 120.2 151 44.4
Gohir.D09G168300 Gossypium hirsutum HOM05D005987 ORTHO05D007233 1.3e-25 120.2 149 45.0
Os02g0321500 Oryza sativa ssp. japonica HOM05D005987 ORTHO05D007233 1.3e-25 120.2 148 47.3
Ca_21942_v3 Cicer arietinum L. HOM05D005987 ORTHO05D007233 1.7e-25 119.8 147 46.3
Nitab4.5_0001207g0020 Nicotiana tabacum HOM05D001815 ORTHO05D007233 1.7e-25 119.8 148 45.9
Lj4g0021830 Lotus japonicus HOM05D005987 ORTHO05D007233 2.2e-25 119.4 147 46.3
Solyc03g112640.3 Solanum lycopersicum HOM05D005987 ORTHO05D007233 2.2e-25 119.4 165 45.5
Phvul.003G202500 Phaseolus vulgaris HOM05D002782 ORTHO05D007233 2.9e-25 119.0 161 46.0
TPR.G37495 Trifolium pratense HOM05D005987 ORTHO05D007233 3.8e-25 118.6 147 45.6
arahy.Tifrunner.gnm1.ann1.T968NY Arachis hypogaea HOM05D005987 ORTHO05D007233 5.0e-25 118.2 148 43.2
MSTRG.9684 Avicennia marina HOM05D005987 ORTHO05D007233 5.0e-25 118.2 149 45.0
Sopen03g031720 Solanum pennellii HOM05D005987 ORTHO05D007233 5.0e-25 118.2 165 44.2
vmacro16628 Vaccinium macrocarpon HOM05D005987 ORTHO05D007233 5.0e-25 118.2 148 45.3
arahy.Tifrunner.gnm1.ann1.9L10M3 Arachis hypogaea HOM05D005987 ORTHO05D007233 6.5e-25 117.9 148 43.9
Glyma.05G039500 Glycine max HOM05D005987 ORTHO05D007233 6.5e-25 117.9 147 46.3
Manes.14G063300 Manihot esculenta HOM05D005987 ORTHO05D007233 6.5e-25 117.9 147 46.9
Sc12g0005210 Simmondsia chinensis HOM05D005987 ORTHO05D007233 6.5e-25 117.9 146 46.6
FAN08G2261 Fragaria x ananassa HOM05D005987 ORTHO05D007233 8.5e-25 117.5 148 44.6
FAN13G1898 Fragaria x ananassa HOM05D005987 ORTHO05D007233 8.5e-25 117.5 148 44.6
Hund09453 Selenicereus undatus HOM05D005987 ORTHO05D007233 8.5e-25 117.5 169 43.8
Actinidia19114 Actinidia chinensis HOM05D005987 ORTHO05D007233 1.1e-24 117.1 148 44.6
arahy.Tifrunner.gnm1.ann1.2X5BV9 Arachis hypogaea HOM05D005987 ORTHO05D007233 1.4e-24 116.7 148 43.2
HanXRQChr03g0068941 Helianthus annuus HOM05D005987 ORTHO05D007233 1.4e-24 116.7 147 46.9
Psat4g058800 Pisum sativum HOM05D005987 ORTHO05D007233 1.4e-24 116.7 148 42.6
THA.LOC104798969 Tarenaya hassleriana HOM05D005987 ORTHO05D007233 1.4e-24 116.7 150 45.3
Lsat_1_v5_gn_7_54241 Lactuca sativa HOM05D005987 ORTHO05D007233 1.9e-24 116.3 147 47.6
MD14G1176400 Malus domestica HOM05D005987 ORTHO05D007233 1.9e-24 116.3 148 45.3
Glyma.17G087400 Glycine max HOM05D005987 ORTHO05D007233 2.5e-24 115.9 147 46.9
PSO832G1443 Papaver somniferum HOM05D005987 ORTHO05D007233 2.5e-24 115.9 147 48.3
PGSC0003DMG400018166 Solanum tuberosum HOM05D005987 ORTHO05D007233 3.2e-24 115.5 165 42.4
TAR371G0908 Trochodendron aralioides HOM05D005987 ORTHO05D007233 3.2e-24 115.5 148 43.9
Nitab4.5_0003229g0030 Nicotiana tabacum HOM05D005987 ORTHO05D007233 4.2e-24 115.2 148 44.6
CDE06G0769 Ceratophyllum demersum HOM05D005987 ORTHO05D007233 7.2e-24 114.4 148 45.9
Oeu016421.1 Olea europaea HOM05D005987 ORTHO05D007233 7.2e-24 114.4 149 41.6
ECA240G0310 Erigeron canadensis HOM05D000306 ORTHO05D007657 2.7e-23 112.5 147 45.6
Psat4g058760 Pisum sativum HOM05D005987 ORTHO05D007233 3.6e-23 112.1 149 43.0
Sed0002182 Sechium edule HOM05D005987 ORTHO05D007233 4.6e-23 111.7 148 41.9
THA.LOC104821480 Tarenaya hassleriana HOM05D005987 ORTHO05D007233 4.6e-23 111.7 150 43.3
Zm00001eb379250 Zea mays HOM05D005987 ORTHO05D007233 4.6e-23 111.7 148 41.9
Aqoxy3G02835 Aquilegia oxysepala HOM05D005987 ORTHO05D007233 6.1e-23 111.3 148 40.5
Aqoxy1G03751 Aquilegia oxysepala HOM05D005987 ORTHO05D007233 7.9e-23 110.9 148 40.5
VMungo1215G1113 Vigna mungo HOM05D005987 ORTHO05D007233 1.4e-22 110.2 148 43.2
FAN04G3269 Fragaria x ananassa HOM05D005987 ORTHO05D007233 1.8e-22 109.8 141 43.3
Haze_07547 Corylus avellana HOM05D005987 ORTHO05D007233 2.3e-22 109.4 156 43.6
Migut.D01982 Erythranthe guttata HOM05D005987 ORTHO05D007233 2.3e-22 109.4 149 42.3
MBI16_g14601_MAGBIO Magnolia biondii HOM05D005987 ORTHO05D007233 2.3e-22 109.4 149 45.0
Medtr4g105450 Medicago truncatula HOM05D005987 ORTHO05D007233 5.1e-22 108.2 147 42.9
BcaC04g23367 Brassica carinata HOM05D005987 ORTHO05D007233 6.7e-22 107.8 147 42.9
Sp2g26190 Schrenkiella parvula HOM05D005987 ORTHO05D007233 6.7e-22 107.8 147 42.9
Cc04_g12360 Coffea canephora HOM05D005987 ORTHO05D007233 8.8e-22 107.5 148 43.9
EL10Ac5g10704 Beta vulgaris HOM05D005987 ORTHO05D007233 1.1e-21 107.1 147 46.3
BcaB04g19948 Brassica carinata HOM05D005987 ORTHO05D007233 1.1e-21 107.1 148 41.9
Oeu024705.1 Olea europaea HOM05D005987 ORTHO05D007233 1.5e-21 106.7 147 42.9
Ah.11g051440 Amaranthus hybridus HOM05D005987 ORTHO05D007233 2.0e-21 106.3 148 43.2
Thhalv10004783m.g Eutrema salsugineum HOM05D005987 ORTHO05D007233 2.0e-21 106.3 147 41.5
AUR62008180 Chenopodium quinoa HOM05D005987 ORTHO05D007233 2.6e-21 105.9 148 43.2
Rhsim12G0166400 Rhododendron simsii HOM05D005987 ORTHO05D007233 4.4e-21 105.1 148 39.9
Carub.0008s2377 Capsella rubella HOM05D005987 ORTHO05D007233 5.7e-21 104.8 147 42.9
CARHR276860 Cardamine hirsuta HOM05D005987 ORTHO05D007233 5.7e-21 104.8 147 43.5
AUR62028761 Chenopodium quinoa HOM05D005987 ORTHO05D007233 1.3e-20 103.6 147 44.9
MSTRG.4360 Avicennia marina HOM05D005987 ORTHO05D007233 1.7e-20 103.2 149 40.9
SEGI_07831 Sequoiadendron giganteum HOM05D005987 ORTHO05D007233 1.7e-20 103.2 148 39.2
SEGI_41325 Sequoiadendron giganteum HOM05D005987 ORTHO05D007233 1.7e-20 103.2 148 39.2
AL8G40080 Arabidopsis lyrata HOM05D005987 ORTHO05D007233 2.2e-20 102.8 155 40.6
AT5G63060 Arabidopsis thaliana HOM05D005987 ORTHO05D007233 2.8e-20 102.4 147 41.5
HPP92_000317 Vanilla planifolia HOM05D005987 ORTHO05D007233 2.8e-20 102.4 148 42.6
Ah.02g110630 Amaranthus hybridus HOM05D005987 ORTHO05D007233 6.3e-20 101.3 148 42.6
DCAR_016038 Daucus carota HOM05D005987 ORTHO05D007233 8.2e-20 100.9 149 43.0
SalBow5G4110 Salvia bowleyana HOM05D005987 ORTHO05D007233 1.8e-19 99.8 150 38.7
SGA_v2.0_scaffold90G27882 Striga asiatica HOM05D005987 ORTHO05D007233 3.1e-19 99.0 147 41.5
ATR1152G043 Amborella trichopoda HOM05D005987 ORTHO05D007233 5.3e-19 98.2 162 39.5
A09p08010 Brassica napus HOM05D005987 ORTHO05D007233 5.3e-19 98.2 161 39.1
unitig_0.g1431 Utricularia gibba HOM05D005987 ORTHO05D007233 6.9e-19 97.8 149 39.6
SGA_v2.0_scaffold116G32224 Striga asiatica HOM05D005987 ORTHO05D007233 3.4e-18 95.5 147 38.8
C09p09060 Brassica napus HOM05D005987 ORTHO05D007233 5.0e-17 91.7 147 40.1
BolC9t53819H Brassica oleracea HOM05D005987 ORTHO05D007233 5.0e-17 91.7 147 40.1
BraA09t36453Z Brassica rapa HOM05D005987 ORTHO05D007233 5.0e-17 91.7 147 40.1
Aa31LG11G610 Aethionema arabicum HOM05D005987 ORTHO05D007233 6.5e-17 91.3 147 40.8
PSO782G2758 Papaver somniferum HOM05D005987 ORTHO05D007233 1.1e-16 90.5 75 61.3
AagrBONN_evm.TU.Sc2ySwM_117.1082 Anthoceros agrestis HOM05D005987 ORTHO05D007233 3.6e-15 85.5 148 36.5
Mapoly0098s0038 Marchantia polymorpha HOM05D005987 ORTHO05D007233 7.9e-15 84.3 148 35.1
SMO270G0062 Selaginella moellendorffii HOM05D005987 ORTHO05D007233 1.8e-14 83.2 151 37.1
Pp3c16_21460 Physcomitrium patens HOM05D005987 ORTHO05D007233 2.6e-13 79.3 148 33.8
CBR_g39624 Chara braunii HOM05D005987 ORTHO05D007233 9.7e-13 77.4 149 32.2
SGA_v2.0_scaffold116G32226 Striga asiatica HOM05D005987 ORTHO05D007233 8.2e-12 74.3 76 47.4
Gohir.A09G172600 Gossypium hirsutum HOM05D005987 ORTHO05D007233 3.8e-09 65.5 96 40.6
FvH4_1g22320 Fragaria vesca HOM05D005987 ORTHO05D007233 5.0e-09 65.1 96 39.6
SalBow5G4086 Salvia bowleyana HOM05D005987 ORTHO05D007233 2.5e-08 62.8 99 38.4
AUR62032481 Chenopodium quinoa HOM05D005987 ORTHO05D007233 2.7e-07 59.3 59 50.8


User provided reference genes

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