Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G087450 Populus trichocarpa HOM05D000002 ORTHO05D000001 5.9e-58 227.3 110 100.0
Sabra05G0021700 Salix brachista HOM05D000002 ORTHO05D000001 5.4e-19 97.8 115 42.6
Sabra17G0101800 Salix brachista HOM05D000002 ORTHO05D000001 5.4e-19 97.8 113 41.6
Sabra16G0104200 Salix brachista HOM05D000002 ORTHO05D000001 1.6e-18 96.3 114 40.4
Sabra10G0062000 Salix brachista HOM05D000002 ORTHO05D000001 1.7e-17 92.8 110 40.9
Hma1.2p1_1397F.1_g280780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.2e-15 86.7 76 48.7
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.6e-15 85.1 105 40.0
Hma1.2p1_1458F.1_g284730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.1e-14 82.0 76 46.1
Atru.chr9.1635 Acer truncatum HOM05D000002 ORTHO05D000001 1.5e-13 79.7 76 44.7
Hma1.2p1_0903F.1_g234920 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.5e-13 79.7 74 45.9
Hma1.2p1_0110F.1_g052720 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.0e-13 79.3 74 47.3
Sabra18G0120700 Salix brachista HOM05D000002 ORTHO05D000001 4.4e-13 78.2 110 38.2
Sabra05G0005600 Salix brachista HOM05D000002 ORTHO05D000001 7.6e-13 77.4 87 41.4
Hma1.2p1_0445F.1_g154480 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.7e-12 76.3 76 43.4
MD13G1099200 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-12 76.3 97 43.3
Sabra16G0004600 Salix brachista HOM05D000002 ORTHO05D000001 1.7e-12 76.3 71 45.1
MD12G1231800 Malus domestica HOM05D000002 ORTHO05D000001 2.2e-12 75.9 115 36.5
Prupe.2G201300 Prunus persica HOM05D000010 ORTHO05D000001 2.9e-12 75.5 88 46.6
RcHm_v2.0_Chr2g0117741 Rosa chinensis HOM05D000002 ORTHO05D000001 2.9e-12 75.5 74 47.3
QL08p061042 Quercus lobata HOM05D000002 ORTHO05D000001 6.4e-12 74.3 74 47.3
Sabra15G0028100 Salix brachista HOM05D000002 ORTHO05D000001 6.4e-12 74.3 110 37.3
MD16G1247000 Malus domestica HOM05D000002 ORTHO05D003361 1.1e-11 73.6 76 44.7
MD14G1189500 Malus domestica HOM05D000002 ORTHO05D000001 1.9e-11 72.8 76 46.1
Sabra15G0060800 Salix brachista HOM05D000113 ORTHO05D000001 1.9e-11 72.8 82 40.2
Ciclev10013318m.g Citrus clementina HOM05D000002 ORTHO05D000001 2.4e-11 72.4 110 40.0
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.2e-11 72.0 81 38.3
Atru.chr11.281 Acer truncatum HOM05D000002 ORTHO05D000001 9.3e-11 70.5 60 50.0
Sabra01G0007200 Salix brachista HOM05D003064 ORTHO05D000001 9.3e-11 70.5 86 36.0
Aqoxy5G02395 Aquilegia oxysepala HOM05D000002 ORTHO05D000001 1.6e-10 69.7 76 42.1
MD17G1248200 Malus domestica HOM05D000002 ORTHO05D000001 2.1e-10 69.3 75 44.0
Hma1.2p1_2812F.1_g328890 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 2.7e-10 68.9 76 40.8
MD00G1024600 Malus domestica HOM05D000002 ORTHO05D000001 3.5e-10 68.6 74 40.5
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 3.5e-10 68.6 112 36.6
TAR042G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.5e-10 68.6 75 45.3
TAR218G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.5e-10 68.6 76 40.8
MD12G1175300 Malus domestica HOM05D000002 ORTHO05D000001 4.6e-10 68.2 74 40.5
MD09G1100700 Malus domestica HOM05D000002 ORTHO05D000001 6.0e-10 67.8 72 38.9
PSO040G0055 Papaver somniferum HOM05D000973 ORTHO05D000001 6.0e-10 67.8 67 43.3
Sabra06G0154000 Salix brachista HOM05D000002 ORTHO05D000001 6.0e-10 67.8 76 38.2
Sabra16G0311100 Salix brachista HOM05D000002 ORTHO05D000001 6.0e-10 67.8 77 37.7
Haze_05884 Corylus avellana HOM05D031102 ORTHO05D000001 7.8e-10 67.4 72 41.7
Dinv08503 Davidia involucrata HOM05D000002 ORTHO05D000001 7.8e-10 67.4 75 38.7
Nn7g37430 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.3e-09 66.6 84 32.1
Prupe.2G074700 Prunus persica HOM05D000002 ORTHO05D000001 1.3e-09 66.6 68 47.1
Sabra15G0130700 Salix brachista HOM05D000432 ORTHO05D000001 1.3e-09 66.6 77 37.7
MD17G1115400 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-09 66.2 72 36.1
PSO423G0202 Papaver somniferum HOM05D000973 ORTHO05D000001 1.7e-09 66.2 67 43.3
Prupe.8G185000 Prunus persica HOM05D000002 ORTHO05D000001 2.3e-09 65.9 104 32.7
Rhsim02G0101900 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.3e-09 65.9 78 35.9
Hma1.2p1_0951F.1_g240790 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.0e-09 65.5 56 50.0
MD02G1303700 Malus domestica HOM05D000002 ORTHO05D000001 3.0e-09 65.5 109 33.9
MD12G1185900 Malus domestica HOM05D000002 ORTHO05D000001 3.0e-09 65.5 68 39.7
TAR696G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.0e-09 65.5 90 41.1
MD11G1146000 Malus domestica HOM05D000002 ORTHO05D000001 6.6e-09 64.3 72 37.5
MD12G1254800 Malus domestica HOM05D002861 ORTHO05D003104 6.6e-09 64.3 102 34.3
MELO3C013392.2 Cucumis melo HOM05D000002 ORTHO05D000001 8.7e-09 63.9 82 40.2
COL.COLO4_38403 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.1e-08 63.5 89 28.1
FvH4_4g05872 Fragaria vesca HOM05D000002 ORTHO05D000001 1.1e-08 63.5 76 38.2
Lj6A385G50 Lonicera japonica HOM05D000097 ORTHO05D000041 1.1e-08 63.5 88 39.8
Prupe.2G201200 Prunus persica HOM05D000010 ORTHO05D000001 1.1e-08 63.5 75 44.0
Dinv10726 Davidia involucrata HOM05D000097 ORTHO05D000041 1.5e-08 63.2 94 34.0
MD13G1142500 Malus domestica HOM05D000002 ORTHO05D000001 1.5e-08 63.2 61 44.3
TAR084G0004 Trochodendron aralioides HOM05D001435 ORTHO05D001304 1.5e-08 63.2 76 36.8
MELO3C028804.2 Cucumis melo HOM05D000002 ORTHO05D000001 1.9e-08 62.8 70 37.1
FvH4_4g33449 Fragaria vesca HOM05D000002 ORTHO05D000001 1.9e-08 62.8 80 36.2
Lj6A388G43 Lonicera japonica HOM05D000097 ORTHO05D000041 1.9e-08 62.8 88 40.9
MD05G1333300 Malus domestica HOM05D000002 ORTHO05D000001 1.9e-08 62.8 77 35.1
Oeu028207.1 Olea europaea HOM05D000002 ORTHO05D000001 1.9e-08 62.8 74 39.2
Sabra01G0140600 Salix brachista HOM05D000002 ORTHO05D000001 1.9e-08 62.8 86 31.4
MD13G1050200 Malus domestica HOM05D000002 ORTHO05D000001 2.5e-08 62.4 92 34.8
Prupe.8G185100 Prunus persica HOM05D000002 ORTHO05D000001 2.5e-08 62.4 75 37.3
Sabra11G0019800 Salix brachista HOM05D000002 ORTHO05D000001 2.5e-08 62.4 64 43.8
TAR722G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.5e-08 62.4 76 39.5
CsaV3_7G000640 Cucumis sativus L. HOM05D000002 ORTHO05D000001 3.3e-08 62.0 81 42.0
Migut.G00019 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.3e-08 62.0 99 34.3
Hma1.2p1_0158F.1_g069590 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.3e-08 62.0 76 40.8
Hma1.2p1_2469F.1_g322690 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.3e-08 62.0 76 40.8
MD11G1197500 Malus domestica HOM05D000002 ORTHO05D000001 3.3e-08 62.0 72 37.5
Nitab4.5_0003319g0020 Nicotiana tabacum HOM05D002833 ORTHO05D000001 3.3e-08 62.0 65 44.6
Oeu035908.1 Olea europaea HOM05D000002 ORTHO05D000001 3.3e-08 62.0 76 40.8
Peaxi162Scf00460g00045 Petunia axillaris HOM05D002833 ORTHO05D000001 3.3e-08 62.0 65 44.6
Sabra14G0114400 Salix brachista HOM05D000002 ORTHO05D000001 3.3e-08 62.0 76 36.8
FvH4_6g36981 Fragaria vesca HOM05D015403 ORTHO05D010713 4.3e-08 61.6 67 43.3
Hma1.2p1_0334F.1_g128690 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.3e-08 61.6 79 38.0
Hma1.2p1_0840F.1_g226720 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.3e-08 61.6 76 40.8
Hma1.2p1_1768F.1_g301510 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.3e-08 61.6 76 40.8
Hma1.2p1_3787F.1_g337595 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.3e-08 61.6 76 40.8
Hma1.2p1_3787F.1_g337600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.3e-08 61.6 76 40.8
MD17G1109500 Malus domestica HOM05D000002 ORTHO05D000001 4.3e-08 61.6 79 38.0
Nitab4.5_0004147g0060 Nicotiana tabacum HOM05D002833 ORTHO05D000001 4.3e-08 61.6 65 44.6
RcHm_v2.0_Chr1g0326351 Rosa chinensis HOM05D000067 ORTHO05D000097 4.3e-08 61.6 76 43.4
FvH4_4g05782 Fragaria vesca HOM05D000002 ORTHO05D000001 5.6e-08 61.2 78 37.2
FvH4_5g09401 Fragaria vesca HOM05D000002 ORTHO05D000001 5.6e-08 61.2 77 35.1
FvH4_5g09403 Fragaria vesca HOM05D000002 ORTHO05D000001 5.6e-08 61.2 75 37.3
Lj6A388G44 Lonicera japonica HOM05D000097 ORTHO05D000041 5.6e-08 61.2 76 42.1
Peaxi162Scf01254g00010 Petunia axillaris HOM05D015337 ORTHO05D019322 5.6e-08 61.2 95 35.8
Hma1.2p1_1446F.1_g283970 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.3e-08 60.8 76 40.8
Dinv05898 Davidia involucrata HOM05D013570 ORTHO05D000001 9.6e-08 60.5 75 36.0
Hma1.2p1_0134F.1_g061510 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.6e-08 60.5 102 35.3
RcHm_v2.0_Chr2g0129181 Rosa chinensis HOM05D000002 ORTHO05D000001 9.6e-08 60.5 77 42.9
Sabra07G0042600 Salix brachista HOM05D000002 ORTHO05D000001 9.6e-08 60.5 76 35.5
Dinv03005 Davidia involucrata HOM05D000097 ORTHO05D000041 1.3e-07 60.1 92 29.3
Rhsim05G0026100 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.3e-07 60.1 79 31.6
Rhsim09G0019300 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.3e-07 60.1 82 37.8
Sabra04G0090100 Salix brachista HOM05D000002 ORTHO05D000001 1.3e-07 60.1 65 38.5
TAR720G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.3e-07 60.1 114 30.7
Lj6A386G19 Lonicera japonica HOM05D014049 ORTHO05D000001 1.6e-07 59.7 88 37.5
Nitab4.5_0003362g0070 Nicotiana tabacum HOM05D002833 ORTHO05D000001 1.6e-07 59.7 74 40.5
TAR192G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.6e-07 59.7 75 38.7
Atru.chr1.1128 Acer truncatum HOM05D000002 ORTHO05D000001 2.1e-07 59.3 96 32.3
C09p34990 Brassica napus HOM05D000002 ORTHO05D000001 2.1e-07 59.3 77 35.1
Dinv06735 Davidia involucrata HOM05D000002 ORTHO05D000001 2.1e-07 59.3 76 38.2
RcHm_v2.0_Chr7g0190501 Rosa chinensis HOM05D000002 ORTHO05D000001 2.1e-07 59.3 70 44.3
Actinidia13742 Actinidia chinensis HOM05D000002 ORTHO05D000001 2.8e-07 58.9 83 34.9
Dinv23999 Davidia involucrata HOM05D000097 ORTHO05D000041 2.8e-07 58.9 98 33.7
FvH4_3g40272 Fragaria vesca HOM05D002251 ORTHO05D002383 2.8e-07 58.9 59 40.7
Sabra11G0106600 Salix brachista HOM05D000002 ORTHO05D000001 2.8e-07 58.9 65 36.9
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 3.6e-07 58.5 112 27.7
COL.COLO4_36674 Corchorus olitorius HOM05D042556 ORTHO05D000001 3.6e-07 58.5 88 34.1
Prupe.6G052200 Prunus persica HOM05D000002 ORTHO05D000001 3.6e-07 58.5 75 42.7
RcHm_v2.0_Chr3g0465981 Rosa chinensis HOM05D000002 ORTHO05D000001 3.6e-07 58.5 78 39.7
RcHm_v2.0_Chr6g0297871 Rosa chinensis HOM05D002251 ORTHO05D002383 3.6e-07 58.5 60 38.3
CSS0034832 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-07 58.2 101 32.7
FvH4_3g17262 Fragaria vesca HOM05D000002 ORTHO05D000001 4.8e-07 58.2 67 44.8
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.8e-07 58.2 101 33.7
Nitab4.5_0000342g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 4.8e-07 58.2 86 38.4
Nitab4.5_0000523g0100 Nicotiana tabacum HOM05D002833 ORTHO05D000001 4.8e-07 58.2 65 43.1
Rhsim05G0196600 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.8e-07 58.2 80 38.8
TAR492G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.8e-07 58.2 79 38.0
COL.COLO4_33694 Corchorus olitorius HOM05D000002 ORTHO05D000001 6.2e-07 57.8 80 31.2
Dinv15019 Davidia involucrata HOM05D000097 ORTHO05D000041 8.1e-07 57.4 97 34.0
HanXRQChr16g0523581 Helianthus annuus HOM05D000002 ORTHO05D000001 8.1e-07 57.4 87 35.6
CSS0017162 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-06 57.0 96 30.2
Dinv23993 Davidia involucrata HOM05D000097 ORTHO05D000041 1.1e-06 57.0 84 28.6
Hma1.2p1_0198F.1_g085460 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-06 57.0 71 38.0
Nitab4.5_0000305g0090 Nicotiana tabacum HOM05D002833 ORTHO05D000001 1.1e-06 57.0 93 32.3
CANSAT78G1493 Cannabis sativa HOM05D000002 ORTHO05D000001 1.4e-06 56.6 72 36.1
Nitab4.5_0000164g0090 Nicotiana tabacum HOM05D002833 ORTHO05D003210 1.4e-06 56.6 65 40.0
Prupe.6G214700 Prunus persica HOM05D000007 ORTHO05D000017 1.4e-06 56.6 72 34.7
CSS0008547 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-06 56.2 76 38.2
CSS0041353 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-06 56.2 69 42.0
Sabra12G0050000 Salix brachista HOM05D000002 ORTHO05D000001 1.8e-06 56.2 64 40.6
MD03G1056000 Malus domestica HOM05D000002 ORTHO05D000001 2.4e-06 55.8 72 34.7
PSO339G0642 Papaver somniferum HOM05D000002 ORTHO05D000001 2.4e-06 55.8 75 37.3
CSS0021158 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-06 55.5 105 29.5
MD14G1225200 Malus domestica HOM05D000002 ORTHO05D000001 3.1e-06 55.5 101 34.7
Rhsim05G0062600 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.1e-06 55.5 89 31.5
CSS0017698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-06 55.1 76 38.2
CSS0034935 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-06 55.1 94 34.0
CSS0041837 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-06 55.1 76 38.2
COL.COLO4_13671 Corchorus olitorius HOM05D000002 ORTHO05D000001 4.0e-06 55.1 77 32.5
Hma1.2p1_0299F.1_g117780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.0e-06 55.1 58 39.7
MD12G1254500 Malus domestica HOM05D002861 ORTHO05D003104 4.0e-06 55.1 86 27.9
Manes.15G176648 Manihot esculenta HOM05D000002 ORTHO05D000001 4.0e-06 55.1 112 28.6
Rhsim04G0108900 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.0e-06 55.1 89 31.5
CANSAT11G1034 Cannabis sativa HOM05D007933 ORTHO05D000001 5.3e-06 54.7 72 33.3
Haze_21636 Corylus avellana HOM05D060543 ORTHO05D000001 5.3e-06 54.7 75 34.7
ECA238G1806 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-06 54.7 112 33.9
Oeu003487.1 Olea europaea HOM05D000002 ORTHO05D000001 5.3e-06 54.7 87 33.3
Prupe.4G199600 Prunus persica HOM05D000002 ORTHO05D000001 5.3e-06 54.7 81 32.1
Sabra11G0010600 Salix brachista HOM05D000002 ORTHO05D000001 5.3e-06 54.7 81 35.8
Nn2g16046 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.9e-06 54.3 84 27.4
PSO104G0170 Papaver somniferum HOM05D003193 ORTHO05D000001 6.9e-06 54.3 79 32.9
Solyc11g020340.1 Solanum lycopersicum HOM05D011121 ORTHO05D000001 6.9e-06 54.3 101 35.6
arahy.Tifrunner.gnm1.ann1.79VNNQ Arachis hypogaea HOM05D005648 ORTHO05D007357 9.0e-06 53.9 83 25.3
CANSAT54G0642 Cannabis sativa HOM05D000002 ORTHO05D000001 9.0e-06 53.9 95 31.6
HanXRQChr10g0315391 Helianthus annuus HOM05D000002 ORTHO05D000001 9.0e-06 53.9 88 30.7
Hma1.2p1_0020F.1_g014040 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.0e-06 53.9 83 34.9
Hma1.2p1_1307F.1_g274730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.0e-06 53.9 83 34.9
MD14G1067200 Malus domestica HOM05D000002 ORTHO05D000001 9.0e-06 53.9 77 35.1
Oeu021500.1 Olea europaea HOM05D000002 ORTHO05D000001 9.0e-06 53.9 87 32.2
PSO423G0122 Papaver somniferum HOM05D000002 ORTHO05D000001 9.0e-06 53.9 80 31.2
RcHm_v2.0_Chr7g0206011 Rosa chinensis HOM05D000002 ORTHO05D000001 9.0e-06 53.9 71 35.2


User provided reference genes

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