Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 4.7e-42 174.1 87 100.0
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 4.7e-42 174.1 87 100.0
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 5.2e-41 170.6 87 96.6
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 2.6e-40 168.3 87 96.6
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 3.0e-36 154.8 84 90.5
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 5.6e-35 150.6 81 91.4
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 1.2e-34 149.4 81 91.4
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 2.1e-34 148.7 81 88.9
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 2.1e-34 148.7 81 88.9
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 2.1e-34 148.7 81 88.9
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 2.8e-34 148.3 81 87.7
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 4.7e-34 147.5 81 87.7
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 1.4e-33 146.0 87 81.6
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 1.8e-33 145.6 80 87.5
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 1.8e-33 145.6 80 87.5
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 2.3e-33 145.2 81 87.7
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 2.3e-33 145.2 81 87.7
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 2.3e-33 145.2 81 87.7
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 2.3e-33 145.2 81 87.7
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 2.3e-33 145.2 81 87.7
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 2.3e-33 145.2 80 87.5
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 5.2e-33 144.1 84 83.3
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 5.2e-33 144.1 84 83.3
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 5.2e-33 144.1 84 83.3
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 5.2e-33 144.1 84 83.3
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 6.8e-33 143.7 83 83.1
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 6.8e-33 143.7 81 85.2
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 6.8e-33 143.7 81 86.4
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 8.9e-33 143.3 80 86.2
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 1.2e-32 142.9 84 82.1
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 1.2e-32 142.9 84 82.1
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 1.2e-32 142.9 87 80.5
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 1.5e-32 142.5 81 84.0
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 2.6e-32 141.7 80 86.2
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 4.4e-32 141.0 80 86.2
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 7.5e-32 140.2 80 83.8
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 9.8e-32 139.8 80 83.8
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 9.8e-32 139.8 81 84.0
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 1.3e-31 139.4 80 82.5
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 2.2e-31 138.7 80 82.5
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 2.2e-31 138.7 83 79.5
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 2.9e-31 138.3 80 83.8
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 3.7e-31 137.9 80 83.8
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 4.9e-31 137.5 80 81.2
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 4.9e-31 137.5 80 83.8
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 6.4e-31 137.1 92 76.1
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 1.1e-30 136.3 80 81.2
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 1.1e-30 136.3 81 80.2
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 1.4e-30 136.0 78 84.6
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 9.2e-30 133.3 85 78.8
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 1.2e-29 132.9 84 77.4
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 1.6e-29 132.5 79 82.3
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 1.6e-29 132.5 82 82.9
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 2.1e-29 132.1 82 80.5
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 3.5e-29 131.3 80 80.0
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 3.5e-29 131.3 82 80.5
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 4.6e-29 131.0 79 79.7
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 6.0e-29 130.6 82 80.5
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 6.0e-29 130.6 87 74.7
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 7.8e-29 130.2 81 75.3
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 1.0e-28 129.8 82 73.2
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 3.9e-28 127.9 82 79.3
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 3.9e-28 127.9 82 72.0
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 3.9e-28 127.9 79 81.0
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 5.1e-28 127.5 72 86.1
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 5.1e-28 127.5 84 76.2
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 6.6e-28 127.1 79 78.5
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 8.6e-28 126.7 79 79.7
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 8.6e-28 126.7 80 78.8
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 1.5e-27 125.9 70 87.1
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 2.5e-27 125.2 79 78.5
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 7.3e-27 123.6 76 78.9
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 7.3e-27 123.6 76 77.6
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 1.6e-26 122.5 83 78.3
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 2.1e-26 122.1 76 81.6
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 2.1e-26 122.1 76 78.9
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 8.1e-26 120.2 76 76.3
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 1.1e-25 119.8 79 74.7
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 1.1e-25 119.8 78 75.6
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 5.2e-25 117.5 76 76.3
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 5.2e-25 117.5 76 76.3
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 8.9e-25 116.7 73 79.5
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 8.9e-25 116.7 68 82.4
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 1.5e-24 115.9 80 71.2
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 2.0e-24 115.5 69 84.1
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 2.6e-24 115.2 73 79.5
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 3.4e-24 114.8 68 83.8
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 3.4e-24 114.8 77 70.1
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 4.4e-24 114.4 67 83.6
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 4.4e-24 114.4 152 44.1
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 4.4e-24 114.4 77 70.1
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 9.9e-24 113.2 77 70.1
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 1.7e-23 112.5 68 82.4
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 2.9e-23 111.7 77 68.8
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 6.4e-23 110.5 77 68.8
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 8.3e-23 110.2 79 69.6
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 7.1e-22 107.1 99 58.6
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 2.1e-21 105.5 64 81.2
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 2.7e-21 105.1 102 58.8
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 4.6e-21 104.4 68 76.5
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 1.7e-20 102.4 67 76.1
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 3.0e-20 101.7 56 87.5
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 3.9e-20 101.3 64 76.6
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 6.6e-20 100.5 55 87.3
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 1.5e-19 99.4 63 77.8
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 5.6e-19 97.4 75 62.7
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 3.6e-18 94.7 122 45.1
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 4.7e-18 94.4 154 40.9
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 6.8e-17 90.5 67 65.7
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 1.2e-16 89.7 78 61.5
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 5.8e-16 87.4 65 67.7
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 2.2e-15 85.5 52 82.7
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 8.4e-15 83.6 52 78.8
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 4.2e-14 81.3 70 64.3
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 5.4e-14 80.9 67 62.7
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 3.5e-13 78.2 55 72.7
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 4.6e-13 77.8 72 54.2
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 1.3e-12 76.3 62 64.5
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 1.3e-12 76.3 73 54.8
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 2.3e-12 75.5 62 66.1
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 2.6e-08 62.0 39 82.1
Nn3g16941 Nelumbo nucifera HOM05D006711 ORTHO05D008104 3.4e-08 61.6 57 54.4
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 5.8e-08 60.8 35 85.7
SHI34267 Sapria himalayana HOM05D006711 ORTHO05D008104 5.4e-06 54.3 34 82.4


User provided reference genes

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