Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G075800 Populus trichocarpa HOM05D003533 ORTHO05D004009 6.5e-25 117.1 83 100.0
Sabra12G0053900 Salix brachista HOM05D003533 ORTHO05D004009 8.2e-20 100.1 83 88.0
Potri.015G070700 Populus trichocarpa HOM05D003533 ORTHO05D004009 4.2e-16 87.8 83 79.5
Sabra15G0095000 Salix brachista HOM05D003533 ORTHO05D004009 5.5e-16 87.4 83 75.9
Sabra15G0095900 Salix brachista HOM05D003533 ORTHO05D004009 5.5e-16 87.4 83 75.9
Cfa019066 Carpinus fangiana HOM05D003533 ORTHO05D004009 9.8e-13 76.6 83 72.3
Manes.14G070400 Manihot esculenta HOM05D003533 ORTHO05D004009 1.7e-12 75.9 84 51.2
Manes.06G100300 Manihot esculenta HOM05D003533 ORTHO05D004009 8.3e-12 73.6 85 50.6
Thecc.03G004000 Theobroma cacao HOM05D003533 ORTHO05D004009 9.1e-11 70.1 80 48.8
Lsat_1_v5_gn_1_12101 Lactuca sativa HOM05D003533 ORTHO05D004009 1.2e-10 69.7 88 45.5
Thecc.03G004200 Theobroma cacao HOM05D003533 ORTHO05D004009 1.2e-10 69.7 80 48.8
CiPaw.12G022900 Carya illinoinensis HOM05D003533 ORTHO05D004009 1.6e-10 69.3 85 52.9
PGR083G0433 Punica granatum HOM05D003533 ORTHO05D004009 4.5e-10 67.8 88 59.1
Duzib084G0973 Durio zibethinus HOM05D003533 ORTHO05D004009 5.9e-10 67.4 83 45.8
Eucgr.C02738 Eucalyptus grandis HOM05D003533 ORTHO05D004009 1.3e-09 66.2 86 66.3
QL10p012332 Quercus lobata HOM05D003533 ORTHO05D004009 2.2e-09 65.5 82 43.9
TWI81G0654 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 2.9e-09 65.1 74 45.9
CANSAT54G2961 Cannabis sativa HOM05D003533 ORTHO05D004009 6.5e-09 63.9 79 49.4
TAR629G1875 Trochodendron aralioides HOM05D003533 ORTHO05D004009 1.5e-08 62.8 84 45.2
MELO3C017124.2 Cucumis melo HOM05D003533 ORTHO05D004009 1.9e-08 62.4 84 47.6
ClCG06G016690 Citrullus lanatus HOM05D003533 ORTHO05D004009 3.2e-08 61.6 51 64.7
ECA247G1125 Erigeron canadensis HOM05D003533 ORTHO05D004009 3.2e-08 61.6 83 39.8
TAR622G1413 Trochodendron aralioides HOM05D003533 ORTHO05D004009 3.2e-08 61.6 84 45.2
MD14G1187200 Malus domestica HOM05D003533 ORTHO05D004009 5.5e-08 60.8 81 43.2
Ciclev10023101m.g Citrus clementina HOM05D003533 ORTHO05D004009 7.2e-08 60.5 83 63.9
TWI15G0955 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 7.2e-08 60.5 83 43.4
Haze_07436 Corylus avellana HOM05D003533 ORTHO05D004009 1.2e-07 59.7 83 72.3
Lj4g0015145 Lotus japonicus HOM05D003533 ORTHO05D004009 2.1e-07 58.9 85 42.4
Glyma.05G033600 Glycine max HOM05D003533 ORTHO05D004009 2.7e-07 58.5 83 41.0
CSS0013527 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 3.6e-07 58.2 85 40.0
CSS0016862 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 3.6e-07 58.2 85 40.0
CsaV3_1G001820 Cucumis sativus L. HOM05D003533 ORTHO05D004009 8.0e-07 57.0 83 49.4
Eucgr.B00337 Eucalyptus grandis HOM05D003533 ORTHO05D004009 8.0e-07 57.0 83 39.8
Medtr4g106500 Medicago truncatula HOM05D003533 ORTHO05D004009 1.4e-06 56.2 79 40.5
RcHm_v2.0_Chr4g0444801 Rosa chinensis HOM05D003533 ORTHO05D004009 1.4e-06 56.2 84 42.9
COL.COLO4_37881 Corchorus olitorius HOM05D003533 ORTHO05D004009 1.8e-06 55.8 82 37.8
Lalb_Chr12g0201351 Lupinus albus HOM05D003533 ORTHO05D004009 2.3e-06 55.5 48 56.2
FAN22G0766 Fragaria x ananassa HOM05D003533 ORTHO05D004009 3.0e-06 55.1 84 41.7
Glyma.17G093500 Glycine max HOM05D003533 ORTHO05D004009 3.0e-06 55.1 86 41.9
TPR.G37447 Trifolium pratense HOM05D003533 ORTHO05D004009 3.0e-06 55.1 47 59.6
Cpa.g.sc3201.1 Carica papaya HOM05D003533 ORTHO05D004009 4.0e-06 54.7 46 63.0
FAN17G1844 Fragaria x ananassa HOM05D003533 ORTHO05D004009 4.0e-06 54.7 84 41.7
FvH4_4g35190 Fragaria vesca HOM05D003533 ORTHO05D004009 5.2e-06 54.3 84 41.7
Prupe.1G261100 Prunus persica HOM05D003533 ORTHO05D004009 5.2e-06 54.3 80 50.0
Sed0014302 Sechium edule HOM05D003533 ORTHO05D004009 5.2e-06 54.3 89 61.8
CiPaw.11G032200 Carya illinoinensis HOM05D003533 ORTHO05D004009 6.8e-06 53.9 91 38.5
Lalb_Chr12g0201361 Lupinus albus HOM05D003533 ORTHO05D004009 6.8e-06 53.9 48 58.3
Oeu017591.1 Olea europaea HOM05D003533 ORTHO05D004009 6.8e-06 53.9 83 39.8


User provided reference genes

Program Settings