Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G072800 Populus trichocarpa HOM05D004983 ORTHO05D005847 4.4e-161 571.2 291 100.0
Sabra12G0052000 Salix brachista HOM05D004983 ORTHO05D005847 6.0e-142 507.7 291 90.0
QL10p014085 Quercus lobata HOM05D004983 ORTHO05D005847 1.6e-102 376.7 291 65.6
Manes.06G098600 Manihot esculenta HOM05D004983 ORTHO05D005847 8.8e-101 370.9 284 70.1
Ciclev10021875m.g Citrus clementina HOM05D004983 ORTHO05D005847 2.6e-100 369.4 233 79.4
CANSAT80G1912 Cannabis sativa HOM05D004983 ORTHO05D005847 3.3e-100 369.0 303 65.7
GSVIVG01008095001 Vitis vinifera HOM05D004983 ORTHO05D005847 7.0e-98 361.3 233 75.5
MD06G1184000 Malus domestica HOM05D004983 ORTHO05D005847 1.5e-97 360.1 278 67.6
TAR374G1152 Trochodendron aralioides HOM05D000005 ORTHO05D000012 1.5e-97 360.1 287 65.2
Eucgr.B00384 Eucalyptus grandis HOM05D004983 ORTHO05D005847 2.0e-97 359.8 253 72.3
Prupe.5G182700 Prunus persica HOM05D004983 ORTHO05D005847 2.0e-97 359.8 281 65.8
Atru.chr9.2363 Acer truncatum HOM05D004983 ORTHO05D005847 3.5e-97 359.0 232 77.2
CiPaw.12G021900 Carya illinoinensis HOM05D004983 ORTHO05D005847 4.5e-97 358.6 233 75.5
Haze_07411 Corylus avellana HOM05D004983 ORTHO05D005847 7.7e-97 357.8 270 67.4
RcHm_v2.0_Chr7g0180081 Rosa chinensis HOM05D004983 ORTHO05D005847 1.7e-96 356.7 239 74.9
CsaV3_1G001940 Cucumis sativus L. HOM05D004983 ORTHO05D005847 1.4e-95 353.6 231 76.6
Hund04599 Selenicereus undatus HOM05D004983 ORTHO05D005847 1.4e-95 353.6 302 63.9
FvH4_5g15990 Fragaria vesca HOM05D004983 ORTHO05D005847 3.2e-95 352.4 239 74.5
Glyma.06G188000 Glycine max HOM05D004983 ORTHO05D005847 5.5e-95 351.7 253 71.9
VMungo1309G2496 Vigna mungo HOM05D004983 ORTHO05D005847 7.2e-95 351.3 239 73.2
Lsat_1_v5_gn_1_11380 Lactuca sativa HOM05D004983 ORTHO05D005847 1.6e-94 350.1 239 72.4
Hma1.2p1_0572F.1_g181120 Hydrangea macrophylla HOM05D004983 ORTHO05D005847 2.7e-94 349.4 258 70.2
FAN04G0333 Fragaria x ananassa HOM05D004983 ORTHO05D005847 4.7e-94 348.6 271 67.9
COL.COLO4_20718 Corchorus olitorius HOM05D004983 ORTHO05D005847 6.1e-94 348.2 230 75.7
AUR62021780 Chenopodium quinoa HOM05D004983 ORTHO05D005847 1.4e-93 347.1 232 75.0
FAN18G0171 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.4e-93 347.1 235 74.5
Gohir.D10G187500 Gossypium hirsutum HOM05D004983 ORTHO05D005847 1.4e-93 347.1 234 75.2
Oeu022186.1 Olea europaea HOM05D004983 ORTHO05D005847 1.8e-93 346.7 262 69.5
AUR62008315 Chenopodium quinoa HOM05D004983 ORTHO05D005847 2.3e-93 346.3 278 66.9
Glyma.04G177000 Glycine max HOM05D004983 ORTHO05D005847 3.0e-93 345.9 252 70.6
PGR044G0258 Punica granatum HOM05D004983 ORTHO05D005847 3.0e-93 345.9 271 65.3
arahy.Tifrunner.gnm1.ann1.GD66SW Arachis hypogaea HOM05D004983 ORTHO05D005847 3.9e-93 345.5 272 65.8
Dinv13111 Davidia involucrata HOM05D004983 ORTHO05D005847 6.7e-93 344.7 285 64.6
Thecc.K0001100 Theobroma cacao HOM05D004983 ORTHO05D005847 8.8e-93 344.4 234 74.4
Medtr0168s0080 Medicago truncatula HOM05D004983 ORTHO05D005847 1.1e-92 344.0 237 73.0
arahy.Tifrunner.gnm1.ann1.TQ2Z41 Arachis hypogaea HOM05D004983 ORTHO05D005847 1.5e-92 343.6 233 73.8
FAN13G0935 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.5e-92 343.6 235 73.6
TPR.G37260 Trifolium pratense HOM05D004983 ORTHO05D005847 1.5e-92 343.6 233 75.1
Cc04_g16050 Coffea canephora HOM05D004983 ORTHO05D005847 3.3e-92 342.4 231 74.5
Lalb_Chr08g0236081 Lupinus albus HOM05D004983 ORTHO05D005847 4.4e-92 342.0 233 72.5
Phvul.009G183500 Phaseolus vulgaris HOM05D004983 ORTHO05D005847 5.7e-92 341.7 255 68.2
Dinv19894 Davidia involucrata HOM05D004983 ORTHO05D005847 2.8e-91 339.3 243 72.0
Sc12g0005910 Simmondsia chinensis HOM05D004983 ORTHO05D005847 1.1e-90 337.4 297 59.9
Thhalv10014312m.g Eutrema salsugineum HOM05D004983 ORTHO05D005847 2.4e-90 336.3 263 65.0
EL10Ac5g10876 Beta vulgaris HOM05D004983 ORTHO05D005847 7.0e-90 334.7 278 64.0
vmacro19336 Vaccinium macrocarpon HOM05D004983 ORTHO05D005847 1.2e-89 334.0 268 64.2
CARHR200420 Cardamine hirsuta HOM05D004983 ORTHO05D005847 1.6e-89 333.6 268 63.1
HanXRQChr02g0045351 Helianthus annuus HOM05D004983 ORTHO05D005847 2.0e-89 333.2 276 63.0
Nitab4.5_0000026g0320 Nicotiana tabacum HOM05D004983 ORTHO05D005847 7.7e-89 331.3 268 63.8
Nitab4.5_0008162g0040 Nicotiana tabacum HOM05D004983 ORTHO05D005847 7.7e-89 331.3 229 70.3
Aqoxy3G00847 Aquilegia oxysepala HOM05D004983 ORTHO05D005847 5.0e-88 328.6 234 71.4
C09p64060 Brassica napus HOM05D004983 ORTHO05D005847 1.1e-87 327.4 255 66.3
Duzib205G0093 Durio zibethinus HOM05D004983 ORTHO05D005847 1.1e-87 327.4 231 72.3
ECA247G1770 Erigeron canadensis HOM05D004983 ORTHO05D005847 1.1e-87 327.4 312 57.4
Actinidia04943 Actinidia chinensis HOM05D004983 ORTHO05D005847 1.9e-87 326.6 257 65.8
BolC9t59243H Brassica oleracea HOM05D004983 ORTHO05D005847 2.5e-87 326.2 255 65.9
PSO591G0429 Papaver somniferum HOM05D004983 ORTHO05D005847 2.5e-87 326.2 232 71.6
Ah.02g112940 Amaranthus hybridus HOM05D004983 ORTHO05D005847 3.2e-87 325.9 267 64.8
CSS0013980 Camellia sinensis var. sinensis HOM05D004983 ORTHO05D005847 4.2e-87 325.5 226 69.9
Nn4g22978 Nelumbo nucifera HOM05D004983 ORTHO05D005847 4.2e-87 325.5 263 64.3
A10p25150 Brassica napus HOM05D004983 ORTHO05D005847 5.5e-87 325.1 255 65.9
Sp6g30930 Schrenkiella parvula HOM05D004983 ORTHO05D005847 5.5e-87 325.1 266 63.2
Aa31LG3G14620 Aethionema arabicum HOM05D004983 ORTHO05D005847 7.2e-87 324.7 240 68.3
CAN.G999.9 Capsicum annuum HOM05D004983 ORTHO05D005847 7.2e-87 324.7 231 70.6
BraA10t44577Z Brassica rapa HOM05D004983 ORTHO05D005847 9.4e-87 324.3 255 65.9
Solyc03g113590.3 Solanum lycopersicum HOM05D004983 ORTHO05D005847 9.4e-87 324.3 268 63.1
Carub.0006s1121 Capsella rubella HOM05D004983 ORTHO05D005847 1.2e-86 323.9 269 61.7
Rhsim08G0163200 Rhododendron simsii HOM05D004983 ORTHO05D005847 1.6e-86 323.6 290 59.3
Migut.I00071 Erythranthe guttata HOM05D004983 ORTHO05D005847 2.1e-86 323.2 285 60.0
AL6G23630 Arabidopsis lyrata HOM05D004983 ORTHO05D005847 3.6e-86 322.4 236 66.9
AT5G13050 Arabidopsis thaliana HOM05D004983 ORTHO05D005847 4.7e-86 322.0 271 60.5
DCAR_016523 Daucus carota HOM05D004983 ORTHO05D005847 4.7e-86 322.0 246 66.3
Sopen03g032630 Solanum pennellii HOM05D004983 ORTHO05D005847 8.0e-86 321.2 248 65.7
QL03p067716 Quercus lobata HOM05D004983 ORTHO05D005847 1.4e-85 320.5 265 63.8
BraA02t05144Z Brassica rapa HOM05D001227 ORTHO05D001082 2.3e-85 319.7 273 60.8
QL03p067725 Quercus lobata HOM05D004983 ORTHO05D005847 3.0e-85 319.3 266 62.8
SGA_v2.0_scaffold25G10860 Striga asiatica HOM05D004983 ORTHO05D005847 3.0e-85 319.3 271 62.4
Ah.11g048970 Amaranthus hybridus HOM05D004983 ORTHO05D005847 5.2e-85 318.5 265 63.0
BolC2t06531H Brassica oleracea HOM05D004983 ORTHO05D005847 8.8e-85 317.8 245 64.5
TPR.G19166 Trifolium pratense HOM05D004983 ORTHO05D005847 1.2e-84 317.4 221 71.5
A02p01650 Brassica napus HOM05D001227 ORTHO05D001082 2.0e-84 316.6 233 66.5
PGSC0003DMG400024570 Solanum tuberosum HOM05D004983 ORTHO05D005847 4.4e-84 315.5 269 61.3
C02p05860 Brassica napus HOM05D001227 ORTHO05D001082 9.7e-84 314.3 270 60.7
BcaNung01856 Brassica carinata HOM05D001227 ORTHO05D001082 1.7e-83 313.5 242 64.9
Ah.02g112900 Amaranthus hybridus HOM05D004983 ORTHO05D005847 4.8e-83 312.0 243 65.4
TWI75G1117 Tripterygium wilfordii HOM05D004983 ORTHO05D005847 1.4e-82 310.5 283 57.2
Haze_12108 Corylus avellana HOM05D004983 ORTHO05D005847 7.0e-82 308.1 243 63.4
Prupe.1G263300 Prunus persica HOM05D004983 ORTHO05D005847 9.1e-82 307.8 290 57.2
Gohir.A12G051800 Gossypium hirsutum HOM05D004983 ORTHO05D005847 4.5e-81 305.4 284 57.0
Ciclev10032272m.g Citrus clementina HOM05D004983 ORTHO05D005847 5.9e-81 305.1 228 65.4
Peaxi162Scf00017g02122 Petunia axillaris HOM05D004983 ORTHO05D005847 1.3e-80 303.9 264 61.0
Lj1g0016910 Lotus japonicus HOM05D004983 ORTHO05D005847 1.7e-80 303.5 206 73.3
Gohir.D12G050100 Gossypium hirsutum HOM05D004983 ORTHO05D005847 2.2e-80 303.1 286 56.6
Gorai.008G053300 Gossypium raimondii HOM05D004983 ORTHO05D005847 1.5e-79 300.4 286 56.3
CiPaw.05G143400 Carya illinoinensis HOM05D004983 ORTHO05D005847 1.9e-79 300.1 232 65.1
FvH4_4g35410 Fragaria vesca HOM05D004983 ORTHO05D005847 1.2e-78 297.4 237 61.6
ATR0665G657 Amborella trichopoda HOM05D004983 ORTHO05D005847 2.1e-78 296.6 231 65.8
arahy.Tifrunner.gnm1.ann1.G2IRY3 Arachis hypogaea HOM05D004983 ORTHO05D005847 4.7e-78 295.4 257 61.1
Thecc.02G237100 Theobroma cacao HOM05D004983 ORTHO05D005847 1.0e-77 294.3 228 65.4
Zm00001eb107660 Zea mays HOM05D004983 ORTHO05D005847 6.8e-77 291.6 241 63.1
HPP92_014218 Vanilla planifolia HOM05D004983 ORTHO05D005847 8.8e-77 291.2 292 54.5
arahy.Tifrunner.gnm1.ann1.N4VW2L Arachis hypogaea HOM05D004983 ORTHO05D005847 1.5e-76 290.4 260 58.5
Os07g0578600 Oryza sativa ssp. japonica HOM05D004983 ORTHO05D005847 3.4e-76 289.3 223 62.8
RcHm_v2.0_Chr4g0445021 Rosa chinensis HOM05D004983 ORTHO05D005847 3.4e-76 289.3 248 60.1
HPP92_026476 Vanilla planifolia HOM05D004983 ORTHO05D005847 4.4e-76 288.9 251 59.4
Atru.chr11.1914 Acer truncatum HOM05D004983 ORTHO05D005847 9.8e-76 287.7 208 66.8
MELO3C017137.2 Cucumis melo HOM05D004983 ORTHO05D005847 1.3e-75 287.3 232 66.8
Gorai.011G210300 Gossypium raimondii HOM05D004983 ORTHO05D005847 1.7e-75 287.0 238 65.1
CDE07G0592 Ceratophyllum demersum HOM05D004983 ORTHO05D005847 2.2e-75 286.6 239 63.2
FAN07G1154 Fragaria x ananassa HOM05D004983 ORTHO05D005847 4.8e-75 285.4 263 55.1
AUR62021779 Chenopodium quinoa HOM05D004983 ORTHO05D005847 2.4e-74 283.1 219 67.6
Peaxi162Scf00496g00013 Petunia axillaris HOM05D004983 ORTHO05D005847 7.0e-74 281.6 214 65.4
unitig_27.g25109 Utricularia gibba HOM05D000870 ORTHO05D005847 1.6e-73 280.4 201 68.7
BcaNung01178 Brassica carinata HOM05D004983 ORTHO05D005847 5.5e-71 271.9 291 52.9
Sed0011699 Sechium edule HOM05D004983 ORTHO05D005847 2.3e-69 266.5 204 69.6
FAN22G0524 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.1e-66 257.7 237 55.3
FAN12G3769 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.4e-66 257.3 276 50.4
MD16G1082800 Malus domestica HOM05D004983 ORTHO05D005847 2.9e-64 249.6 256 54.3
Psat5g181720 Pisum sativum HOM05D004983 ORTHO05D005847 4.3e-63 245.7 144 81.9
Nn4g24106 Nelumbo nucifera HOM05D004983 ORTHO05D005847 7.3e-63 245.0 236 58.5
Duzib251G0645 Durio zibethinus HOM05D004983 ORTHO05D005847 2.8e-62 243.0 185 65.4
Nitab4.5_0002376g0010 Nicotiana tabacum HOM05D004983 ORTHO05D005847 6.1e-62 241.9 291 48.1
SMO271G0141 Selaginella moellendorffii HOM05D004983 ORTHO05D005847 6.1e-62 241.9 230 55.2
CSS0025366 Camellia sinensis var. sinensis HOM05D004983 ORTHO05D005847 1.8e-61 240.4 158 75.3
Cpa.g.sc203.7 Carica papaya HOM05D004983 ORTHO05D005847 1.8e-61 240.4 300 48.7
SalBow5G1630 Salvia bowleyana HOM05D004983 ORTHO05D005847 2.3e-61 240.0 252 55.2
AagrBONN_evm.TU.Sc2ySwM_362.273 Anthoceros agrestis HOM05D004983 ORTHO05D005847 4.4e-60 235.7 224 54.0
Mapoly0019s0150 Marchantia polymorpha HOM05D004983 ORTHO05D005847 6.4e-59 231.9 234 49.6
Lj9A456T34 Lonicera japonica HOM05D004983 ORTHO05D005847 1.1e-58 231.1 140 79.3
Gohir.A10G180700 Gossypium hirsutum HOM05D004983 ORTHO05D005847 5.4e-58 228.8 146 76.0
Dinv31146 Davidia involucrata HOM05D004983 ORTHO05D005847 3.9e-56 222.6 151 70.2
Nitab4.5_0000642g0190 Nicotiana tabacum HOM05D004983 ORTHO05D005847 3.6e-54 216.1 263 50.2
Atru.chr11.1910 Acer truncatum HOM05D004983 ORTHO05D005847 4.0e-53 212.6 152 68.4
Nitab4.5_0000710g0080 Nicotiana tabacum HOM05D004983 ORTHO05D005847 2.5e-47 193.4 160 60.0
Nitab4.5_0009486g0020 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.8e-45 187.2 186 56.5
CBR_g34194 Chara braunii HOM05D004983 ORTHO05D005847 6.4e-43 178.7 225 43.6
Pp3c3_32060 Physcomitrium patens HOM05D004983 ORTHO05D005847 7.8e-41 171.8 165 51.5
Pp3c12_22470 Physcomitrium patens HOM05D004983 ORTHO05D005847 1.0e-40 171.4 177 50.8
SEGI_36548 Sequoiadendron giganteum HOM05D004983 ORTHO05D005847 1.3e-40 171.0 142 59.9
Hma1.2p1_4120F.1_g338320 Hydrangea macrophylla HOM05D004983 ORTHO05D005847 4.0e-37 159.5 96 79.2
GSVIVG01020126001 Vitis vinifera HOM05D004983 ORTHO05D005847 5.8e-36 155.6 129 60.5
Cre09.g403293 Chlamydomonas reinhardtii HOM05D004983 ORTHO05D005847 7.8e-33 145.2 226 39.8
SEGI_02343 Sequoiadendron giganteum HOM05D004983 ORTHO05D005847 7.6e-28 128.6 96 66.7
ClCG06G016570 Citrullus lanatus HOM05D004983 ORTHO05D005847 4.9e-27 125.9 137 54.7
FAN17G3002 Fragaria x ananassa HOM05D004983 ORTHO05D005847 7.1e-26 122.1 119 52.9
MCO01G728 Micromonas commoda HOM05D004983 ORTHO05D005847 3.3e-23 113.2 245 33.5
PRCOL_00002663 Prasinoderma coloniale HOM05D004983 ORTHO05D005847 4.3e-23 112.8 239 33.1
Psat0s864g0040 Pisum sativum HOM05D004983 ORTHO05D005847 9.6e-23 111.7 91 64.8
Atru.chr11.1911 Acer truncatum HOM05D004983 ORTHO05D005847 3.1e-21 106.7 75 66.7
Nitab4.5_0000710g0100 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.0e-11 75.1 101 41.6
Cfa021669 Carpinus fangiana HOM05D004983 ORTHO05D005847 6.2e-06 55.8 168 26.2


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