Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 5.8e-103 377.5 181 100.0
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 5.3e-88 327.8 181 90.1
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 5.0e-78 294.7 182 77.5
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 4.7e-76 288.1 180 76.1
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 7.9e-76 287.3 182 75.8
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 7.9e-76 287.3 182 75.8
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 2.6e-74 282.3 181 75.7
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 1.7e-73 279.6 182 73.1
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 5.3e-72 274.6 180 72.2
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 1.5e-71 273.1 180 71.7
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 2.0e-71 272.7 180 71.1
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 4.5e-71 271.6 181 71.3
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 1.7e-70 269.6 181 69.6
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 1.7e-70 269.6 181 72.4
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 6.5e-70 267.7 183 70.5
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 8.5e-70 267.3 183 75.4
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 8.5e-70 267.3 185 74.6
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 2.7e-68 262.3 182 70.9
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 3.6e-68 261.9 183 74.3
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 8.0e-68 260.8 185 71.4
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.4e-67 260.0 185 71.4
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 1.4e-67 260.0 180 66.7
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 2.3e-67 259.2 185 71.4
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 3.9e-67 258.5 188 70.7
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 2.0e-66 256.1 185 71.4
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 9.7e-66 253.8 181 71.8
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 1.3e-65 253.4 180 68.9
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 2.8e-65 252.3 181 71.8
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 4.8e-65 251.5 182 64.3
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 3.1e-64 248.8 185 68.1
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 7.0e-64 247.7 182 69.2
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 1.6e-63 246.5 180 66.7
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 2.0e-63 246.1 186 68.8
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 3.5e-63 245.4 180 66.1
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 5.9e-63 244.6 182 68.7
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 7.7e-63 244.2 127 88.2
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 3.8e-62 241.9 182 65.9
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 5.0e-62 241.5 182 68.7
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 8.5e-62 240.7 184 68.5
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 1.1e-61 240.4 182 68.7
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 1.9e-61 239.6 181 65.7
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 2.5e-61 239.2 181 67.4
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 8.0e-60 234.2 181 67.4
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 1.0e-59 233.8 182 64.3
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 1.0e-59 233.8 181 67.4
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 3.0e-59 232.3 181 67.4
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 6.7e-59 231.1 181 64.6
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 1.2e-58 230.3 184 63.0
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 2.6e-58 229.2 162 68.5
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 3.3e-58 228.8 184 62.5
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 7.5e-58 227.6 163 66.9
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 1.7e-57 226.5 181 61.9
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 2.2e-57 226.1 182 63.7
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 2.2e-57 226.1 174 64.9
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 3.7e-57 225.3 182 62.6
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 8.3e-57 224.2 182 63.2
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 1.4e-56 223.4 126 81.7
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 2.4e-56 222.6 181 61.9
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 3.1e-56 222.2 180 63.9
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 3.1e-56 222.2 181 62.4
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 7.0e-56 221.1 181 61.3
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 9.1e-56 220.7 122 81.1
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 9.1e-56 220.7 128 76.6
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 1.2e-55 220.3 190 59.5
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 2.7e-55 219.2 146 71.9
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 1.3e-54 216.9 168 64.9
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 2.2e-54 216.1 189 60.3
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 2.2e-54 216.1 182 61.0
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 2.9e-54 215.7 119 81.5
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 2.9e-54 215.7 183 60.7
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 3.8e-54 215.3 183 62.3
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 8.5e-54 214.2 180 61.7
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 8.5e-54 214.2 183 62.3
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 8.5e-54 214.2 187 59.4
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 1.1e-53 213.8 182 61.5
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 1.5e-53 213.4 180 61.7
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 1.9e-53 213.0 182 59.9
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 1.9e-53 213.0 182 59.9
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 1.9e-53 213.0 183 61.2
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 3.2e-53 212.2 187 60.4
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 3.2e-53 212.2 187 60.4
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 3.2e-53 212.2 184 59.8
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 4.2e-53 211.8 185 61.1
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 5.5e-53 211.5 183 61.7
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 9.4e-53 210.7 130 75.4
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 1.6e-52 209.9 182 59.9
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 2.1e-52 209.5 114 84.2
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 2.7e-52 209.1 181 59.1
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 8.0e-52 207.6 177 61.0
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 1.0e-51 207.2 148 68.9
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 1.4e-51 206.8 148 68.9
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 1.4e-51 206.8 148 68.9
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 5.2e-51 204.9 182 56.0
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 8.8e-51 204.1 133 71.4
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 3.7e-49 198.7 111 82.0
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 1.4e-48 196.8 176 59.1
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 2.7e-47 192.6 116 75.0
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 2.1e-44 183.0 184 56.0
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 4.4e-42 175.3 161 55.9
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 1.3e-41 173.7 148 57.4
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 8.3e-41 171.0 145 60.0
Ciclev10022880m.g Citrus clementina HOM05D007067 ORTHO05D008864 2.3e-38 162.9 112 66.1
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 5.2e-35 151.8 174 50.6
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 5.8e-34 148.3 104 66.3
FvH4_5g14690 Fragaria vesca HOM05D007067 ORTHO05D008864 5.8e-34 148.3 124 63.7
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 2.0e-31 139.8 134 53.0
Manes.06G090801 Manihot esculenta HOM05D007067 ORTHO05D008864 1.3e-25 120.6 96 61.5
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 7.3e-21 104.8 94 51.1
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 2.8e-20 102.8 100 46.0
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 4.0e-19 99.0 90 50.0
Haze_07309 Corylus avellana HOM05D007067 ORTHO05D008864 1.2e-18 97.4 180 37.2
Ah.11g048310 Amaranthus hybridus HOM05D007067 ORTHO05D008864 6.0e-15 85.1 99 49.5
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 2.6e-10 69.7 52 73.1
Rhsim08G0168600 Rhododendron simsii HOM05D000306 ORTHO05D023263 1.0e-06 57.8 180 28.3


User provided reference genes

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