Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G066250 Populus trichocarpa HOM05D009211 ORTHO05D011170 4.9e-79 297.7 150 100.0
Manes.06G086800 Manihot esculenta HOM05D009211 ORTHO05D011170 3.5e-29 132.1 153 52.3
Atru.chr9.405 Acer truncatum HOM05D009211 ORTHO05D011170 3.9e-28 128.6 148 50.0
Thecc.03G098100 Theobroma cacao HOM05D009211 ORTHO05D011170 4.0e-25 118.6 144 46.5
Haze_07693 Corylus avellana HOM05D009211 ORTHO05D011170 1.9e-22 109.8 153 41.2
COL.COLO4_22212 Corchorus olitorius HOM05D009211 ORTHO05D011170 7.1e-22 107.8 124 46.8
Cfa019310 Carpinus fangiana HOM05D009211 ORTHO05D011170 1.6e-21 106.7 130 42.3
Actinidia04839 Actinidia chinensis HOM05D009211 ORTHO05D011170 1.3e-20 103.6 113 48.7
CSS0047999 Camellia sinensis var. sinensis HOM05D009211 ORTHO05D011170 8.7e-20 100.9 112 46.4
Gorai.008G197300 Gossypium raimondii HOM05D009211 ORTHO05D011170 2.5e-19 99.4 144 43.1
QL10p018860 Quercus lobata HOM05D009211 ORTHO05D011170 3.1e-17 92.4 123 43.9
CiPaw.11G050900 Carya illinoinensis HOM05D009211 ORTHO05D011170 4.5e-16 88.6 131 41.2
FAN08G0220 Fragaria x ananassa HOM05D009211 ORTHO05D011170 1.0e-15 87.4 152 40.8
Prupe.5G202900 Prunus persica HOM05D009211 ORTHO05D011170 1.0e-15 87.4 116 44.0
Aqoxy3G00486 Aquilegia oxysepala HOM05D009211 ORTHO05D011170 1.3e-15 87.0 141 40.4
Cpa.g.sc94.21 Carica papaya HOM05D009211 ORTHO05D011170 3.8e-15 85.5 124 41.1
Gohir.A12G181250 Gossypium hirsutum HOM05D009211 ORTHO05D011170 5.0e-15 85.1 91 52.7
Aqoxy1G00314 Aquilegia oxysepala HOM05D009211 ORTHO05D011170 6.5e-15 84.7 124 40.3
FAN18G1019 Fragaria x ananassa HOM05D009211 ORTHO05D011170 1.4e-14 83.6 152 38.8
FAN13G1505 Fragaria x ananassa HOM05D009211 ORTHO05D011170 3.2e-14 82.4 152 38.8
FvH4_5g14220 Fragaria vesca HOM05D009211 ORTHO05D011170 4.2e-14 82.0 152 40.1
Migut.I00442 Erythranthe guttata HOM05D009211 ORTHO05D011170 9.7e-11 70.9 120 41.7
Oeu038366.1 Olea europaea HOM05D009211 ORTHO05D011170 4.1e-09 65.5 103 40.8
Nitab4.5_0001688g0080 Nicotiana tabacum HOM05D009211 ORTHO05D011170 6.9e-09 64.7 112 33.9
Glyma.17G077200 Glycine max HOM05D009211 ORTHO05D011170 1.2e-08 63.9 142 30.3
VMungo1215G2572 Vigna mungo HOM05D009211 ORTHO05D011170 2.6e-08 62.8 136 30.9
Medtr4g109380 Medicago truncatula HOM05D009211 ORTHO05D011170 1.3e-07 60.5 137 30.7
Phvul.003G185900 Phaseolus vulgaris HOM05D009211 ORTHO05D011170 1.7e-07 60.1 136 30.1
TPR.G2006 Trifolium pratense HOM05D009211 ORTHO05D011170 1.9e-06 56.6 118 30.5
CAN.G587.37 Capsicum annuum HOM05D035866 ORTHO05D011170 5.5e-06 55.1 65 44.6
DCAR_021511 Daucus carota HOM05D000113 ORTHO05D002571 5.5e-06 55.1 116 31.9


User provided reference genes

Program Settings