Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G054000 Populus trichocarpa HOM05D008114 ORTHO05D010089 1.2e-33 146.0 75 100.0
Sabra12G0037800 Salix brachista HOM05D008114 ORTHO05D010089 9.4e-23 109.8 66 86.4
TAR374G0456 Trochodendron aralioides HOM05D008114 ORTHO05D010089 6.5e-16 87.0 75 62.7
Thecc.03G040900 Theobroma cacao HOM05D008114 ORTHO05D010089 2.7e-14 81.6 70 64.3
TAR371G0741 Trochodendron aralioides HOM05D008114 ORTHO05D010089 8.0e-14 80.1 75 57.3
Cfa019734 Carpinus fangiana HOM05D008114 ORTHO05D010089 3.0e-13 78.2 75 53.3
Rhsim12G0141700 Rhododendron simsii HOM05D008114 ORTHO05D010089 6.8e-13 77.0 76 59.2
Gohir.D09G050800 Gossypium hirsutum HOM05D008114 ORTHO05D010089 8.8e-13 76.6 71 60.6
Gorai.006G058900 Gossypium raimondii HOM05D008114 ORTHO05D010089 8.8e-13 76.6 71 60.6
TAR535G0009 Trochodendron aralioides HOM05D008114 ORTHO05D010089 8.8e-13 76.6 79 55.7
Duzib205G1811 Durio zibethinus HOM05D008114 ORTHO05D010089 2.0e-12 75.5 80 55.0
Prupe.5G224700 Prunus persica HOM05D008114 ORTHO05D010089 7.5e-12 73.6 76 56.6
Haze_18729 Corylus avellana HOM05D008114 ORTHO05D010089 9.7e-12 73.2 76 52.6
CiPaw.16G088900 Carya illinoinensis HOM05D008114 ORTHO05D010089 1.7e-11 72.4 63 60.3
Manes.05G132900 Manihot esculenta HOM05D008114 ORTHO05D010089 1.7e-11 72.4 66 59.1
TAR426G0004 Trochodendron aralioides HOM05D008114 ORTHO05D010089 3.7e-11 71.2 81 54.3
QL10p026513 Quercus lobata HOM05D008114 ORTHO05D010089 4.8e-11 70.9 69 50.7
Hma1.2p1_1314F.1_g275000 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 1.8e-10 68.9 80 51.2
Hma1.2p1_2306F.1_g319355 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 1.8e-10 68.9 80 51.2
Atru.chr9.903 Acer truncatum HOM05D008114 ORTHO05D010089 3.1e-10 68.2 70 61.4
Glyma.07G097200 Glycine max HOM05D008114 ORTHO05D010089 3.1e-10 68.2 64 53.1
Dinv12222 Davidia involucrata HOM05D008114 ORTHO05D010089 5.3e-10 67.4 72 51.4
Hma1.2p1_1283F.1_g272780 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 5.3e-10 67.4 57 61.4
Atru.chr11.236 Acer truncatum HOM05D008114 ORTHO05D010089 7.0e-10 67.0 75 56.0
CSS0032238 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 7.0e-10 67.0 75 50.7
Sed0001808 Sechium edule HOM05D008114 ORTHO05D010089 7.0e-10 67.0 50 62.0
MELO3C002108.2 Cucumis melo HOM05D008114 ORTHO05D010089 1.6e-09 65.9 66 47.0
CsaV3_1G006920 Cucumis sativus L. HOM05D008114 ORTHO05D010089 1.6e-09 65.9 66 47.0
ClCG04G010920 Citrullus lanatus HOM05D008114 ORTHO05D010089 2.0e-09 65.5 66 48.5
CSS0047992 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 2.7e-09 65.1 53 58.5
TAR622G0804 Trochodendron aralioides HOM05D008114 ORTHO05D010089 3.5e-09 64.7 75 52.0
TAR622G1122 Trochodendron aralioides HOM05D008114 ORTHO05D010089 3.5e-09 64.7 75 52.0
Manes.06G065000 Manihot esculenta HOM05D008114 ORTHO05D010089 4.5e-09 64.3 75 46.7
FAN08G3365 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.0e-08 63.2 67 55.2
FAN18G3335 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.0e-08 63.2 64 54.7
FAN04G2580 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.3e-08 62.8 67 55.2
Nn4g23952 Nelumbo nucifera HOM05D008114 ORTHO05D010089 1.7e-08 62.4 69 47.8
Glyma.09G180700 Glycine max HOM05D008114 ORTHO05D010089 2.2e-08 62.0 64 48.4
Ciclev10017364m.g Citrus clementina HOM05D008114 ORTHO05D010089 8.5e-08 60.1 78 50.0
CSS0031808 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 1.9e-07 58.9 70 50.0
RcHm_v2.0_Chr4g0434421 Rosa chinensis HOM05D008114 ORTHO05D010089 7.2e-07 57.0 77 49.4
Psat6g224640 Pisum sativum HOM05D021627 ORTHO05D021511 1.2e-06 56.2 76 47.4
Cpa.g.sc3.466 Carica papaya HOM05D008114 ORTHO05D010089 2.1e-06 55.5 60 45.0
Manes.14G106800 Manihot esculenta HOM05D008114 ORTHO05D010089 2.1e-06 55.5 66 50.0
CiPaw.05G241900 Carya illinoinensis HOM05D008114 ORTHO05D010089 2.7e-06 55.1 78 41.0
CiPaw.05G242400 Carya illinoinensis HOM05D008114 ORTHO05D010089 2.7e-06 55.1 78 41.0
Ciclev10023125m.g Citrus clementina HOM05D008114 ORTHO05D010089 2.7e-06 55.1 71 52.1
Potri.010G120300 Populus trichocarpa HOM05D008114 ORTHO05D010089 2.7e-06 55.1 79 45.6
Cfa015838 Carpinus fangiana HOM05D008114 ORTHO05D010089 4.7e-06 54.3 75 46.7
Migut.I00449 Erythranthe guttata HOM05D008114 ORTHO05D010089 4.7e-06 54.3 53 47.2
QL01p010819 Quercus lobata HOM05D008114 ORTHO05D010089 4.7e-06 54.3 62 43.5
Thecc.02G221900 Theobroma cacao HOM05D008114 ORTHO05D010089 4.7e-06 54.3 76 47.4
Haze_00653 Corylus avellana HOM05D008114 ORTHO05D010089 6.1e-06 53.9 76 50.0
FAN17G1195 Fragaria x ananassa HOM05D008114 ORTHO05D010089 6.1e-06 53.9 78 50.0
FAN22G0519 Fragaria x ananassa HOM05D008114 ORTHO05D010089 8.0e-06 53.5 78 50.0
THA.LOC104809237 Tarenaya hassleriana HOM05D013984 ORTHO05D010089 8.0e-06 53.5 64 43.8


User provided reference genes

Program Settings