Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 2.0e-242 842.0 443 100.0
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 8.1e-207 723.8 394 94.2
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 6.3e-175 617.8 445 72.8
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 1.7e-156 556.6 417 69.3
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 4.7e-154 548.5 409 70.4
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 2.3e-153 546.2 417 68.1
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 8.3e-151 537.7 417 66.7
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.1e-150 537.3 418 67.9
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 2.9e-148 529.3 437 64.8
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 2.9e-148 529.3 426 67.1
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 8.5e-148 527.7 414 66.4
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 4.2e-147 525.4 448 61.8
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 9.4e-147 524.2 419 65.2
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 6.1e-146 521.5 423 66.7
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 1.0e-145 520.8 447 61.5
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 1.2e-144 517.3 405 65.2
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 8.3e-143 511.1 439 62.4
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 5.4e-142 508.4 409 65.3
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 1.2e-141 507.3 417 65.2
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.7e-141 506.1 408 65.9
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 3.5e-141 505.8 407 65.6
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 4.5e-141 505.4 408 66.2
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 5.0e-140 501.9 417 61.9
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.9e-139 500.0 407 64.6
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 2.8e-138 496.1 414 61.6
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 4.7e-138 495.4 421 63.4
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 6.1e-138 495.0 422 62.1
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 1.0e-137 494.2 438 60.7
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 1.0e-137 494.2 416 64.2
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 5.2e-137 491.9 412 61.7
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 1.5e-136 490.3 430 60.2
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 2.0e-136 490.0 430 59.8
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 3.4e-136 489.2 423 61.2
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 2.4e-134 483.0 416 60.1
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 1.2e-133 480.7 436 58.9
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 1.2e-133 480.7 399 62.4
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 2.0e-133 479.9 402 63.7
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 3.5e-133 479.2 416 61.3
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 3.5e-133 479.2 410 61.2
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 6.6e-132 474.9 414 60.4
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 8.6e-132 474.6 405 61.5
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 8.6e-132 474.6 405 61.5
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 1.9e-131 473.4 415 60.5
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 1.2e-130 470.7 415 60.0
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 3.6e-130 469.2 407 59.2
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 4.7e-130 468.8 401 60.3
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 1.0e-129 467.6 415 58.6
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 1.0e-129 467.6 396 61.1
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 1.4e-129 467.2 409 58.9
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 1.8e-129 466.8 407 59.5
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 2.3e-129 466.5 415 58.6
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 8.9e-129 464.5 405 60.7
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 1.2e-128 464.2 408 58.3
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 4.9e-127 458.8 411 60.6
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 1.1e-126 457.6 375 63.5
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 2.7e-125 453.0 400 59.0
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.6e-122 443.7 401 57.1
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 1.7e-119 433.7 450 54.7
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 4.1e-118 429.1 347 62.2
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 5.4e-118 428.7 433 52.2
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 3.5e-117 426.0 433 51.0
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 2.3e-116 423.3 337 65.9
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 1.5e-115 420.6 415 53.7
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 1.6e-114 417.2 431 50.8
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 2.1e-114 416.8 410 52.4
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 2.1e-114 416.8 410 53.2
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 3.6e-114 416.0 410 53.4
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 4.7e-114 415.6 410 52.7
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 4.7e-114 415.6 410 52.7
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 1.8e-113 413.7 404 54.0
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 1.5e-112 410.6 406 53.0
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 5.8e-112 408.7 405 51.9
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 1.7e-111 407.1 379 55.7
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 1.4e-110 404.1 380 56.8
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 7.1e-110 401.7 345 62.3
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.5e-107 394.0 370 54.1
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 5.3e-97 359.0 333 55.6
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 7.6e-96 355.1 378 50.8
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 4.9e-95 352.4 420 47.1
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.0e-92 344.7 324 54.9
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 3.9e-92 342.8 288 61.5
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 5.3e-89 332.4 419 44.6
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 2.1e-82 310.5 375 45.6
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 3.7e-82 309.7 290 54.8
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 5.8e-80 302.4 368 43.8
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 3.2e-78 296.6 387 42.9
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 3.2e-78 296.6 260 59.2
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 3.7e-74 283.1 411 41.1
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 2.7e-69 266.9 227 61.7
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 2.5e-67 260.4 302 47.7
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 2.9e-63 246.9 306 46.1
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 3.9e-60 236.5 398 36.7
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 2.5e-59 233.8 388 38.1
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 2.9e-47 193.7 601 26.8
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 6.7e-44 182.6 196 47.4
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 1.1e-41 175.3 247 41.3
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 1.6e-37 161.4 116 69.8
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 9.1e-33 145.6 128 57.8
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 7.2e-30 136.0 134 52.2
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 5.4e-25 119.8 84 76.2
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 1.6e-24 118.2 126 52.4
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 1.1e-22 112.1 101 63.4
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 3.3e-22 110.5 355 26.5
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 3.6e-21 107.1 79 67.1
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 6.8e-20 102.8 81 65.4
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 8.9e-20 102.4 77 66.2
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 2.7e-16 90.9 65 76.9
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 1.0e-12 79.0 78 52.6
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 1.4e-12 78.6 237 30.0
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 1.8e-12 78.2 45 84.4
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 1.2e-08 65.5 44 77.3
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 7.3e-06 56.2 60 48.3


User provided reference genes

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