Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G047000 Populus trichocarpa HOM05D007068 ORTHO05D008590 3.9e-249 864.4 444 100.0
Sabra12G0033000 Salix brachista HOM05D007068 ORTHO05D008590 9.0e-214 746.9 479 82.3
Manes.14G171300 Manihot esculenta HOM05D007068 ORTHO05D008590 9.6e-83 311.6 465 46.9
Thecc.03G056900 Theobroma cacao HOM05D007068 ORTHO05D008590 3.2e-78 296.6 448 45.3
COL.COLO4_04377 Corchorus olitorius HOM05D007068 ORTHO05D008590 1.6e-77 294.3 384 48.7
Atru.chr9.1734 Acer truncatum HOM05D007068 ORTHO05D008590 5.1e-76 289.3 446 44.2
Duzib084G0836 Durio zibethinus HOM05D007068 ORTHO05D008590 3.3e-75 286.6 452 44.0
Cfa019656 Carpinus fangiana HOM05D007068 ORTHO05D008590 3.0e-68 263.5 454 43.2
A06p04350 Brassica napus HOM05D007068 ORTHO05D008590 3.9e-68 263.1 450 40.9
Carub.0001s3769 Capsella rubella HOM05D007068 ORTHO05D008590 8.8e-68 261.9 449 40.3
Dinv17551 Davidia involucrata HOM05D007068 ORTHO05D008590 1.5e-67 261.2 455 42.0
AL1G55220 Arabidopsis lyrata HOM05D007068 ORTHO05D008590 5.7e-67 259.2 452 40.3
CiPaw.16G093400 Carya illinoinensis HOM05D007068 ORTHO05D008590 8.2e-66 255.4 410 42.0
CARHR038180 Cardamine hirsuta HOM05D007068 ORTHO05D008590 4.1e-65 253.1 454 39.2
Sp1g35530 Schrenkiella parvula HOM05D007068 ORTHO05D008590 4.1e-65 253.1 452 40.9
AT1G48580 Arabidopsis thaliana HOM05D007068 ORTHO05D008590 5.3e-65 252.7 469 39.9
Gohir.D07G066400 Gossypium hirsutum HOM05D007068 ORTHO05D008590 2.0e-64 250.8 374 43.3
Sed0003101 Sechium edule HOM05D007068 ORTHO05D008590 1.0e-63 248.4 472 37.9
Eucgr.K02273 Eucalyptus grandis HOM05D007068 ORTHO05D008590 1.3e-63 248.1 379 45.6
QL10p029594 Quercus lobata HOM05D007068 ORTHO05D008590 1.3e-63 248.1 434 40.8
Thhalv10011472m.g Eutrema salsugineum HOM05D007068 ORTHO05D008590 3.8e-63 246.5 469 39.7
Gorai.001G070000 Gossypium raimondii HOM05D007068 ORTHO05D008590 3.8e-63 246.5 376 42.8
BcaB07g33743 Brassica carinata HOM05D007068 ORTHO05D008590 5.0e-63 246.1 459 39.2
CANSAT80G0386 Cannabis sativa HOM05D007068 ORTHO05D008590 1.1e-62 245.0 447 39.1
BcaC08g43059 Brassica carinata HOM05D007068 ORTHO05D008590 1.4e-62 244.6 464 39.7
BolC6t35436H Brassica oleracea HOM05D007068 ORTHO05D008590 1.4e-62 244.6 464 39.7
C06p03180 Brassica napus HOM05D007068 ORTHO05D008590 2.5e-62 243.8 448 40.0
Haze_18849 Corylus avellana HOM05D007068 ORTHO05D008590 1.2e-61 241.5 487 39.8
BraA06t23639Z Brassica rapa HOM05D007068 ORTHO05D008590 1.6e-61 241.1 475 38.5
Gohir.A07G061700 Gossypium hirsutum HOM05D007068 ORTHO05D008590 1.6e-61 241.1 375 41.6
CsaV3_1G004370 Cucumis sativus L. HOM05D007068 ORTHO05D008590 3.6e-61 240.0 482 39.0
Aa31LG10G5220 Aethionema arabicum HOM05D007068 ORTHO05D008590 6.1e-61 239.2 453 41.1
TAR622G0435 Trochodendron aralioides HOM05D007068 ORTHO05D008590 5.7e-59 232.6 377 43.0
MELO3C017359.2 Cucumis melo HOM05D007068 ORTHO05D008590 1.3e-58 231.5 480 37.9
Hma1.2p1_0669F.1_g200120 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 2.2e-58 230.7 379 42.5
Nn3g18277 Nelumbo nucifera HOM05D007068 ORTHO05D008590 5.9e-56 222.6 379 39.3
GSVIVG01011540001 Vitis vinifera HOM05D007068 ORTHO05D008590 5.9e-56 222.6 448 37.9
Rhsim08G0124500 Rhododendron simsii HOM05D007068 ORTHO05D008590 1.5e-54 218.0 454 37.9
CSS0009831 Camellia sinensis var. sinensis HOM05D007068 ORTHO05D008590 1.9e-54 217.6 461 38.2
Prupe.5G233500 Prunus persica HOM05D007068 ORTHO05D008590 5.5e-54 216.1 422 39.6
RcHm_v2.0_Chr7g0178441 Rosa chinensis HOM05D007068 ORTHO05D008590 9.4e-54 215.3 451 38.8
Lalb_Chr16g0386991 Lupinus albus HOM05D007068 ORTHO05D008590 2.1e-53 214.2 404 39.9
Actinidia39838 Actinidia chinensis HOM05D007068 ORTHO05D008590 2.7e-53 213.8 459 38.8
FvH4_5g17330 Fragaria vesca HOM05D007068 ORTHO05D008590 4.0e-52 209.9 450 36.2
FAN18G2889 Fragaria x ananassa HOM05D007068 ORTHO05D008590 4.0e-52 209.9 450 36.2
Psat7g003560 Pisum sativum HOM05D007068 ORTHO05D008590 1.3e-50 204.9 399 38.6
Ca_17189_v3 Cicer arietinum L. HOM05D007068 ORTHO05D008590 1.7e-50 204.5 395 35.7
ClCG06G014310 Citrullus lanatus HOM05D007068 ORTHO05D008590 8.2e-50 202.2 471 36.5
Cc04_g06260 Coffea canephora HOM05D007068 ORTHO05D008590 1.8e-49 201.1 471 35.9
FAN13G0457 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.8e-49 201.1 450 36.2
SalBow1G5613 Salvia bowleyana HOM05D007068 ORTHO05D008590 9.1e-49 198.7 448 34.6
Cpa.g.sc3.397 Carica papaya HOM05D007068 ORTHO05D008590 2.0e-48 197.6 455 34.1
Aqoxy3G00060 Aquilegia oxysepala HOM05D007068 ORTHO05D008590 3.5e-48 196.8 465 37.0
VMungo0251G0101 Vigna mungo HOM05D007068 ORTHO05D008590 1.3e-47 194.9 380 37.9
Solyc03g118700.3 Solanum lycopersicum HOM05D007068 ORTHO05D008590 3.8e-47 193.4 459 37.0
Migut.D01541 Erythranthe guttata HOM05D007068 ORTHO05D008590 5.0e-47 193.0 467 33.4
ECA238G2622 Erigeron canadensis HOM05D007068 ORTHO05D008590 6.5e-47 192.6 374 38.8
Medtr8g107330 Medicago truncatula HOM05D007068 ORTHO05D008590 1.5e-46 191.4 375 36.5
PGSC0003DMG400005672 Solanum tuberosum HOM05D007068 ORTHO05D008590 1.9e-46 191.0 459 35.9
Lj4g0019727 Lotus japonicus HOM05D007068 ORTHO05D008590 2.5e-46 190.7 396 36.9
Oeu031766.1 Olea europaea HOM05D007068 ORTHO05D008590 2.5e-46 190.7 458 34.9
arahy.Tifrunner.gnm1.ann1.N01HH5 Arachis hypogaea HOM05D007068 ORTHO05D008590 2.1e-45 187.6 446 34.3
Nitab4.5_0004556g0050 Nicotiana tabacum HOM05D007068 ORTHO05D008590 2.3e-44 184.1 450 34.2
FAN04G2769 Fragaria x ananassa HOM05D007068 ORTHO05D008590 4.0e-44 183.3 448 35.3
CAN.G843.56 Capsicum annuum HOM05D007068 ORTHO05D008590 6.8e-44 182.6 464 36.9
MD06G1227000 Malus domestica HOM05D007068 ORTHO05D008590 2.0e-43 181.0 271 43.9
Lsat_1_v5_gn_2_14700 Lactuca sativa HOM05D007068 ORTHO05D008590 3.4e-43 180.3 487 30.4
Nitab4.5_0003401g0040 Nicotiana tabacum HOM05D007068 ORTHO05D008590 3.4e-43 180.3 278 43.9
SGA_v2.0_scaffold36G14383 Striga asiatica HOM05D007068 ORTHO05D008590 3.4e-43 180.3 461 34.1
Glyma.08G054400 Glycine max HOM05D007068 ORTHO05D008590 2.8e-42 177.2 402 35.3
Phvul.002G330100 Phaseolus vulgaris HOM05D007068 ORTHO05D008590 4.8e-42 176.4 400 33.0
PSO017G3869 Papaver somniferum HOM05D007068 ORTHO05D008590 8.3e-42 175.6 461 34.9
Peaxi162Scf00683g00453 Petunia axillaris HOM05D007068 ORTHO05D008590 1.8e-41 174.5 449 35.6
PSO478G2297 Papaver somniferum HOM05D007068 ORTHO05D008590 2.4e-41 174.1 466 35.6
arahy.Tifrunner.gnm1.ann1.ZH8P6D Arachis hypogaea HOM05D007068 ORTHO05D008590 5.4e-41 172.9 479 32.2
TPR.G1401 Trifolium pratense HOM05D007068 ORTHO05D008590 7.0e-41 172.6 413 35.1
DCAR_014504 Daucus carota HOM05D007068 ORTHO05D008590 1.1e-38 165.2 455 33.6
Hma1.2p1_0669F.1_g200130 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 1.0e-36 158.7 472 33.5
Ciclev10008793m.g Citrus clementina HOM05D007068 ORTHO05D008590 7.5e-35 152.5 356 35.4
MBI13_g47078_MAGBIO Magnolia biondii HOM05D007068 ORTHO05D008590 2.2e-34 151.0 175 53.1
EL10Ac4g08480 Beta vulgaris HOM05D007068 ORTHO05D008590 8.3e-34 149.1 420 30.0
AUR62037972 Chenopodium quinoa HOM05D007068 ORTHO05D008590 1.8e-33 147.9 199 46.7
Hund10357 Selenicereus undatus HOM05D007068 ORTHO05D008590 2.0e-32 144.4 227 43.2
Peaxi162Scf00683g00454 Petunia axillaris HOM05D007068 ORTHO05D008590 2.3e-31 141.0 457 32.2
Ah.06g187490 Amaranthus hybridus HOM05D007068 ORTHO05D008590 2.9e-31 140.6 229 41.9
ATR0618G302 Amborella trichopoda HOM05D007068 ORTHO05D008590 4.2e-30 136.7 336 31.2
HPP92_002012 Vanilla planifolia HOM05D007068 ORTHO05D008590 2.0e-27 127.9 475 28.4
Sc10g0009180 Simmondsia chinensis HOM05D007068 ORTHO05D008590 2.6e-27 127.5 293 34.5
CDE02G3810 Ceratophyllum demersum HOM05D007068 ORTHO05D008590 1.3e-26 125.2 155 42.6
VMungo0251G0567 Vigna mungo HOM05D007068 ORTHO05D008590 6.4e-26 122.9 205 37.6
SEGI_36605 Sequoiadendron giganteum HOM05D007068 ORTHO05D008590 2.3e-23 114.4 96 55.2
SMO164G0186 Selaginella moellendorffii HOM05D007068 ORTHO05D008590 3.3e-22 110.5 174 37.4
HanXRQChr14g0431751 Helianthus annuus HOM05D007068 ORTHO05D008590 5.6e-22 109.8 79 64.6
Zm00001eb304630 Zea mays HOM05D007068 ORTHO05D008590 1.2e-19 102.1 438 26.9
SMO164G0105 Selaginella moellendorffii HOM05D020476 ORTHO05D008590 5.8e-19 99.8 163 36.2
Mapoly0060s0110 Marchantia polymorpha HOM05D007068 ORTHO05D008590 7.5e-19 99.4 178 36.0
Sopen03g037660 Solanum pennellii HOM05D007068 ORTHO05D008590 1.1e-17 95.5 194 44.8
vmacro17572 Vaccinium macrocarpon HOM05D007068 ORTHO05D008590 2.4e-17 94.4 83 56.6
unitig_8.g4506 Utricularia gibba HOM05D007068 ORTHO05D008590 2.7e-16 90.9 453 26.5
AagrBONN_evm.TU.Sc2ySwM_362.2609 Anthoceros agrestis HOM05D007068 ORTHO05D008590 1.0e-15 89.0 102 45.1
FAN08G2700 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.9e-14 84.7 112 42.0
Pp3c3_22100 Physcomitrium patens HOM05D007068 ORTHO05D008590 2.8e-13 80.9 146 38.4
Pp3c3_22103 Physcomitrium patens HOM05D007068 ORTHO05D008590 2.8e-13 80.9 146 38.4
arahy.Tifrunner.gnm1.ann1.USF1F6 Arachis hypogaea HOM05D007068 ORTHO05D008590 4.0e-12 77.0 56 58.9
VMungo1215G1321 Vigna mungo HOM05D007068 ORTHO05D008590 1.4e-09 68.6 62 48.4
CBR_g21755 Chara braunii HOM05D007068 ORTHO05D008590 2.5e-06 57.8 85 37.6
VMungo0251G2390 Vigna mungo HOM05D007068 ORTHO05D008590 7.3e-06 56.2 129 31.0


User provided reference genes

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