Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 5.7e-73 277.7 165 100.0
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 1.4e-63 246.5 174 87.4
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 2.2e-48 196.1 167 67.1
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 7.8e-46 187.6 165 61.8
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 3.0e-45 185.7 165 60.6
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 1.1e-44 183.7 129 72.9
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 2.5e-44 182.6 129 72.9
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 4.3e-44 181.8 166 63.3
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 4.3e-44 181.8 133 68.4
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 5.6e-44 181.4 162 59.3
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 9.5e-44 180.6 165 60.6
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 1.2e-43 180.3 130 70.8
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 2.8e-43 179.1 133 68.4
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 6.2e-43 177.9 167 59.9
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 1.1e-42 177.2 133 66.9
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.8e-42 176.4 126 71.4
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 1.8e-42 176.4 164 64.0
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 2.3e-42 176.0 163 60.1
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 4.0e-42 175.3 132 68.2
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 8.9e-42 174.1 126 71.4
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 1.2e-41 173.7 129 69.8
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 1.5e-41 173.3 133 67.7
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.5e-41 173.3 133 65.4
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 2.6e-41 172.6 165 60.0
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 2.6e-41 172.6 165 55.8
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 3.4e-41 172.2 166 59.6
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 3.4e-41 172.2 166 59.6
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 3.4e-41 172.2 126 69.8
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 4.4e-41 171.8 165 57.6
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 4.4e-41 171.8 129 69.8
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 5.8e-41 171.4 166 59.0
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 7.6e-41 171.0 133 65.4
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 1.3e-40 170.2 133 66.9
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 1.3e-40 170.2 133 67.7
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.3e-40 170.2 126 69.0
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 1.7e-40 169.9 158 60.1
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 1.7e-40 169.9 158 59.5
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 1.7e-40 169.9 158 58.2
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 2.2e-40 169.5 158 58.9
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 2.2e-40 169.5 126 69.0
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 2.2e-40 169.5 126 69.0
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 3.8e-40 168.7 129 69.0
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 3.8e-40 168.7 171 61.4
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 8.4e-40 167.5 132 65.9
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 1.1e-39 167.2 133 65.4
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 1.4e-39 166.8 134 67.2
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 1.9e-39 166.4 131 66.4
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 2.4e-39 166.0 131 64.1
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 7.1e-39 164.5 130 65.4
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 9.2e-39 164.1 130 65.4
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 1.6e-38 163.3 129 65.9
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 2.7e-38 162.5 149 59.1
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 2.7e-38 162.5 130 65.4
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 3.5e-38 162.2 126 65.9
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 3.5e-38 162.2 133 63.9
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 3.5e-38 162.2 129 63.6
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 6.0e-38 161.4 125 68.0
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 6.0e-38 161.4 127 64.6
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 1.3e-37 160.2 121 68.6
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.7e-37 159.8 127 63.8
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.7e-37 159.8 127 63.8
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 3.0e-37 159.1 130 63.1
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 6.6e-37 157.9 130 63.8
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 6.6e-37 157.9 131 60.3
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 8.6e-37 157.5 133 63.9
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 1.1e-36 157.1 122 66.4
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 1.5e-36 156.8 131 60.3
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 1.9e-36 156.4 130 60.8
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 2.5e-36 156.0 130 60.0
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 3.3e-36 155.6 113 69.9
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 5.6e-36 154.8 131 60.3
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 7.3e-36 154.5 154 53.9
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 7.3e-36 154.5 112 68.8
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 9.6e-36 154.1 165 51.5
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 9.6e-36 154.1 133 60.2
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 1.2e-35 153.7 154 53.2
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 1.2e-35 153.7 154 53.2
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.2e-35 153.7 128 61.7
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 1.6e-35 153.3 154 52.6
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 2.1e-35 152.9 154 53.2
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 2.8e-35 152.5 133 58.6
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 3.6e-35 152.1 130 61.5
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 4.7e-35 151.8 128 61.7
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 4.7e-35 151.8 128 60.2
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 1.1e-34 150.6 128 60.2
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 1.1e-34 150.6 131 56.5
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 1.1e-34 150.6 129 61.2
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 1.4e-34 150.2 130 59.2
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 1.4e-34 150.2 130 59.2
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 1.4e-34 150.2 123 63.4
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.4e-34 150.2 128 59.4
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 3.1e-34 149.1 125 60.8
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 4.0e-34 148.7 128 60.9
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 5.2e-34 148.3 132 57.6
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 5.2e-34 148.3 193 48.7
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 6.9e-34 147.9 182 48.4
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 1.2e-33 147.1 133 58.6
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 1.5e-33 146.7 118 63.6
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 1.5e-33 146.7 120 62.5
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 2.6e-33 146.0 127 60.6
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 4.4e-33 145.2 158 51.9
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 4.4e-33 145.2 130 54.6
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 7.6e-33 144.4 133 53.4
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 6.4e-32 141.4 128 58.6
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 1.2e-30 137.1 128 57.0
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 1.2e-30 137.1 128 56.2
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 2.7e-30 136.0 128 57.0
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 6.0e-30 134.8 128 57.0
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 1.0e-29 134.0 120 59.2
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 6.6e-29 131.3 127 59.1
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 1.1e-28 130.6 128 53.9
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 4.3e-28 128.6 113 61.9
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 1.2e-25 120.6 322 31.7
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 9.9e-25 117.5 107 57.0
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 3.2e-23 112.5 164 45.7
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 9.3e-23 110.9 86 66.3
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 1.4e-18 97.1 95 54.7
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 3.1e-18 95.9 73 67.1
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 1.2e-17 94.0 134 42.5
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 1.9e-15 86.7 72 59.7
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.6e-14 83.6 133 39.1
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 2.1e-14 83.2 133 39.1
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.1e-10 70.9 100 45.0
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 5.3e-10 68.6 92 44.6
MBI15_g37973_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 6.5e-08 61.6 45 64.4


User provided reference genes

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