Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G027700 Populus trichocarpa HOM05D000533 ORTHO05D010350 2.1e-40 168.7 91 100.0
PGR111G0065 Punica granatum HOM05D000533 ORTHO05D010350 3.1e-36 154.8 91 90.1
Gohir.D11G334200 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.4e-33 145.2 91 83.5
Lalb_Chr07g0191831 Lupinus albus HOM05D000533 ORTHO05D010350 2.1e-32 142.1 92 83.7
BolC2t10602H Brassica oleracea HOM05D000533 ORTHO05D010350 3.5e-32 141.4 91 83.5
BolSC29t60511H Brassica oleracea HOM05D000533 ORTHO05D010350 3.5e-32 141.4 91 83.5
BolSC35t60709H Brassica oleracea HOM05D000533 ORTHO05D010350 3.5e-32 141.4 91 83.5
BolSC37t60798H Brassica oleracea HOM05D000533 ORTHO05D010350 3.5e-32 141.4 91 83.5
BraSC138t45530Z Brassica rapa HOM05D000533 ORTHO05D010350 3.5e-32 141.4 91 83.5
BraSC143t45655Z Brassica rapa HOM05D000533 ORTHO05D010350 3.5e-32 141.4 91 83.5
BraSC25t45915Z Brassica rapa HOM05D000533 ORTHO05D010350 3.5e-32 141.4 91 83.5
BraSC59t46555Z Brassica rapa HOM05D000533 ORTHO05D010350 3.5e-32 141.4 91 83.5
Gohir.A01G140394 Gossypium hirsutum HOM05D000533 ORTHO05D010350 3.5e-32 141.4 89 83.1
Sed0000963 Sechium edule HOM05D000533 ORTHO05D010350 3.5e-32 141.4 91 80.2
HanXRQChr00c0336g0573701 Helianthus annuus HOM05D000533 ORTHO05D001069 4.6e-32 141.0 91 83.5
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 4.6e-32 141.0 91 83.5
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 4.6e-32 141.0 91 83.5
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 4.6e-32 141.0 91 83.5
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 4.6e-32 141.0 91 83.5
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 4.6e-32 141.0 91 83.5
Lalb_Chr15g0080711 Lupinus albus HOM05D000533 ORTHO05D010350 7.9e-32 140.2 92 82.6
Nn1g08630 Nelumbo nucifera HOM05D000533 ORTHO05D010350 1.0e-31 139.8 91 83.5
LjContig00318g0021062 Lotus japonicus HOM05D000533 ORTHO05D010350 1.3e-31 139.4 91 80.2
LjContig00319g0004235 Lotus japonicus HOM05D000533 ORTHO05D010350 1.3e-31 139.4 91 80.2
Lalb_Chr20g0108591 Lupinus albus HOM05D000533 ORTHO05D010350 1.8e-31 139.0 92 82.6
RcHm_v2.0_Chr3g0470821 Rosa chinensis HOM05D000533 ORTHO05D010350 1.8e-31 139.0 91 79.1
CARHR282480 Cardamine hirsuta HOM05D000533 ORTHO05D010350 3.0e-31 138.3 91 81.3
BolSC35t60687H Brassica oleracea HOM05D000533 ORTHO05D010350 3.9e-31 137.9 91 81.3
BolC7t43859H Brassica oleracea HOM05D000533 ORTHO05D010350 5.1e-31 137.5 91 81.3
Gohir.A04G053052 Gossypium hirsutum HOM05D000533 ORTHO05D010350 5.1e-31 137.5 88 81.8
Oeu058352.1 Olea europaea HOM05D000533 ORTHO05D010350 8.7e-31 136.7 91 78.0
CAN.G1470.7 Capsicum annuum HOM05D000533 ORTHO05D010350 1.9e-30 135.6 91 80.2
CAN.G965.2 Capsicum annuum HOM05D000533 ORTHO05D010350 1.9e-30 135.6 91 80.2
Eucgr.C01838 Eucalyptus grandis HOM05D000533 ORTHO05D010350 4.3e-30 134.4 84 85.7
PGSC0003DMG400029905 Solanum tuberosum HOM05D000533 ORTHO05D010350 5.6e-30 134.0 91 80.2
ATCG01120 Arabidopsis thaliana HOM05D000533 ORTHO05D010350 9.6e-30 133.3 91 79.1
DCAR_032543 Daucus carota HOM05D000533 ORTHO05D010350 1.3e-29 132.9 88 76.1
Gohir.1Z050566 Gossypium hirsutum HOM05D000533 ORTHO05D010350 4.0e-28 127.9 79 83.5
Lalb_Chr03g0030911 Lupinus albus HOM05D000533 ORTHO05D010350 6.9e-28 127.1 82 82.9
Gohir.1Z049594 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.2e-27 126.3 79 82.3
Gohir.A13G086380 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.0e-27 125.6 79 82.3
Hund27629 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.0e-27 125.6 90 70.0
Hund28852 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.0e-27 125.6 90 70.0
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.0e-27 125.6 90 70.0
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.0e-27 125.6 90 70.0
Hund29500 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.0e-27 125.6 90 70.0
Gorai.013G128500 Gossypium raimondii HOM05D000533 ORTHO05D010350 3.4e-27 124.8 79 83.5
MD09G1289300 Malus domestica HOM05D000533 ORTHO05D010350 7.6e-27 123.6 85 76.5
Hund29432 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.0e-26 123.2 88 70.5
Gohir.D06G106350 Gossypium hirsutum HOM05D000533 ORTHO05D010350 3.8e-26 121.3 85 74.1
Gorai.006G055100 Gossypium raimondii HOM05D000533 ORTHO05D010350 3.8e-26 121.3 86 74.4
Medtr4g006090 Medicago truncatula HOM05D000533 ORTHO05D010350 3.8e-26 121.3 92 71.7
MD12G1237700 Malus domestica HOM05D000533 ORTHO05D010350 1.9e-25 119.0 81 74.1
Medtr6g042190 Medicago truncatula HOM05D000533 ORTHO05D010350 1.9e-25 119.0 92 70.7
Gohir.D13G114450 Gossypium hirsutum HOM05D000533 ORTHO05D010350 9.3e-25 116.7 79 78.5
Medtr0002s0210 Medicago truncatula HOM05D000533 ORTHO05D010350 1.6e-24 115.9 80 71.2
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 6.0e-24 114.0 72 84.7
Gohir.D11G237260 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.3e-23 112.1 77 75.3
SGA_v2.0_scaffold150G36658 Striga asiatica HOM05D000533 ORTHO05D010350 2.3e-23 112.1 86 64.0
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 8.7e-23 110.2 89 66.3
Peaxi162Scf00030g02115 Petunia axillaris HOM05D000533 ORTHO05D010350 1.9e-22 109.0 139 51.1
BolSC49t61148H Brassica oleracea HOM05D000533 ORTHO05D010350 4.3e-22 107.8 75 76.0
Lsat_1_v5_gn_5_821 Lactuca sativa HOM05D000533 ORTHO05D001069 9.7e-22 106.7 64 84.4
Gorai.011G221100 Gossypium raimondii HOM05D000533 ORTHO05D010350 2.8e-21 105.1 71 74.6
Hund30643 Selenicereus undatus HOM05D001200 ORTHO05D009713 2.8e-21 105.1 73 71.2
MD08G1073600 Malus domestica HOM05D000533 ORTHO05D010350 1.8e-20 102.4 70 74.3
BolSC29t60551H Brassica oleracea HOM05D000533 ORTHO05D010350 2.4e-20 102.1 70 80.0
BolC9t56911H Brassica oleracea HOM05D000533 ORTHO05D010350 3.1e-20 101.7 70 77.1
BolSC45t60904H Brassica oleracea HOM05D000533 ORTHO05D010350 2.0e-19 99.0 68 79.4
HanXRQChr17g0560431 Helianthus annuus HOM05D000533 ORTHO05D010350 2.0e-19 99.0 67 82.1
Nitab4.5_0006409g0070 Nicotiana tabacum HOM05D001070 ORTHO05D010350 1.0e-18 96.7 64 79.7
C09p40120 Brassica napus HOM05D000890 ORTHO05D000697 5.0e-18 94.4 58 82.8
BolC5t34052H Brassica oleracea HOM05D000533 ORTHO05D010350 2.5e-17 92.0 56 83.9
Peaxi162Scf00147g00312 Petunia axillaris HOM05D000445 ORTHO05D010350 4.2e-17 91.3 61 78.7
BolSC44t60827H Brassica oleracea HOM05D000533 ORTHO05D010350 6.1e-16 87.4 73 65.8
Medtr1g041540 Medicago truncatula HOM05D000533 ORTHO05D001069 1.4e-15 86.3 68 67.6
MD12G1214000 Malus domestica HOM05D000533 ORTHO05D010350 7.4e-14 80.5 53 73.6
Phvul.001G058350 Phaseolus vulgaris HOM05D000533 ORTHO05D010350 4.8e-13 77.8 54 72.2
Hund03919 Selenicereus undatus HOM05D000533 ORTHO05D010350 6.3e-13 77.4 56 69.6
HanXRQChr00c0690g0576771 Helianthus annuus HOM05D000533 ORTHO05D010350 1.2e-11 73.2 59 67.8
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 1.5e-11 72.8 61 68.9
MD12G1021800 Malus domestica HOM05D000533 ORTHO05D010350 6.5e-10 67.4 45 75.6
CBR_g28520 Chara braunii HOM05D003936 ORTHO05D004747 1.1e-09 66.6 74 44.6
Mapoly0065s0028 Marchantia polymorpha HOM05D003936 ORTHO05D004747 2.7e-08 62.0 68 44.1
MCO09G555 Micromonas commoda HOM05D000533 ORTHO05D010350 3.6e-08 61.6 66 47.0
AagrBONN_evm.TU.Sc2ySwM_368.3374 Anthoceros agrestis HOM05D003936 ORTHO05D004747 6.1e-08 60.8 71 40.8
MCO16G694 Micromonas commoda HOM05D003936 ORTHO05D003028 4.4e-06 54.7 67 43.3


User provided reference genes

Program Settings