Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 4.1e-76 288.1 160 100.0
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 4.7e-64 248.1 177 81.9
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 6.2e-64 247.7 156 89.7
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 3.5e-59 231.9 160 83.1
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 1.0e-58 230.3 156 82.7
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 3.9e-58 228.4 160 80.6
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 3.9e-58 228.4 157 80.9
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 8.6e-58 227.3 152 85.5
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 3.3e-57 225.3 152 80.9
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 3.3e-57 225.3 148 82.4
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 4.3e-57 224.9 156 82.7
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 4.3e-57 224.9 148 84.5
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 5.6e-57 224.6 153 81.0
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 7.3e-57 224.2 158 82.9
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 9.5e-57 223.8 152 82.2
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 1.2e-56 223.4 159 79.2
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 1.2e-56 223.4 148 83.8
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 1.2e-56 223.4 148 83.8
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 1.6e-56 223.0 150 84.0
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 4.7e-56 221.5 154 82.5
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 6.2e-56 221.1 155 80.6
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 6.2e-56 221.1 153 81.0
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 8.1e-56 220.7 153 81.0
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 8.1e-56 220.7 152 82.2
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 1.1e-55 220.3 152 82.2
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 1.1e-55 220.3 152 82.9
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 4.0e-55 218.4 148 82.4
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 4.0e-55 218.4 149 81.2
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 5.2e-55 218.0 153 79.7
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 5.2e-55 218.0 153 79.7
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 5.2e-55 218.0 154 80.5
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 2.0e-54 216.1 160 74.4
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.6e-54 215.7 153 79.7
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 3.4e-54 215.3 149 79.2
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 3.4e-54 215.3 150 76.7
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 3.4e-54 215.3 150 76.0
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 3.4e-54 215.3 150 76.7
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 3.4e-54 215.3 146 80.1
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 3.4e-54 215.3 150 76.7
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 3.4e-54 215.3 149 80.5
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 3.4e-54 215.3 149 80.5
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 5.8e-54 214.5 144 79.2
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 5.8e-54 214.5 152 79.6
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 5.8e-54 214.5 143 80.4
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 7.5e-54 214.2 144 79.2
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 7.5e-54 214.2 146 80.1
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 9.9e-54 213.8 156 78.2
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 9.9e-54 213.8 144 79.2
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 9.9e-54 213.8 141 84.4
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 1.3e-53 213.4 157 78.3
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 1.7e-53 213.0 150 79.3
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 1.7e-53 213.0 146 78.8
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 2.2e-53 212.6 150 75.3
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 2.2e-53 212.6 150 76.0
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 2.9e-53 212.2 149 78.5
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 2.9e-53 212.2 144 78.5
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 2.9e-53 212.2 150 76.0
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 4.9e-53 211.5 140 82.1
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 6.4e-53 211.1 160 76.2
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 6.4e-53 211.1 154 80.5
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 6.4e-53 211.1 154 80.5
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 8.3e-53 210.7 144 77.8
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 8.3e-53 210.7 144 78.5
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 1.1e-52 210.3 144 80.6
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 1.1e-52 210.3 155 77.4
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 1.4e-52 209.9 152 77.0
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 1.4e-52 209.9 154 77.9
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 1.9e-52 209.5 149 75.2
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 3.2e-52 208.8 147 81.0
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 3.2e-52 208.8 156 76.3
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 7.1e-52 207.6 145 78.6
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 9.2e-52 207.2 150 79.3
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 1.2e-51 206.8 150 74.0
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 1.2e-51 206.8 149 75.8
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 1.2e-51 206.8 135 84.4
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 2.1e-51 206.1 145 77.9
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 3.5e-51 205.3 143 79.7
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 4.6e-51 204.9 152 76.3
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 6.0e-51 204.5 143 79.7
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 6.0e-51 204.5 154 76.0
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 7.8e-51 204.1 156 75.0
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 5.1e-50 201.4 152 77.0
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 8.6e-50 200.7 160 71.9
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 5.6e-49 198.0 146 74.7
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 4.4e-46 188.3 140 72.1
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 5.8e-46 188.0 116 93.1
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 1.7e-45 186.4 156 67.3
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 4.9e-45 184.9 142 70.4
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 1.4e-44 183.3 152 71.1
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 4.2e-44 181.8 156 68.6
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 7.8e-43 177.6 150 65.3
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 1.0e-42 177.2 154 70.8
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 1.3e-42 176.8 146 71.2
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 1.1e-41 173.7 143 65.0
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 7.3e-41 171.0 151 68.2
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 2.8e-40 169.1 158 66.5
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 6.2e-40 167.9 215 53.0
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 4.0e-39 165.2 154 66.2
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 1.7e-37 159.8 109 82.6
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 6.4e-37 157.9 114 79.8
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 6.4e-37 157.9 156 62.8
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 1.9e-36 156.4 153 65.4
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 2.4e-36 156.0 158 62.7
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 2.4e-36 156.0 181 58.0
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 7.8e-35 151.0 147 61.2
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 7.8e-35 151.0 156 60.3
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 7.3e-33 144.4 107 76.6
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 1.3e-32 143.7 142 54.2
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 4.8e-32 141.7 107 74.8
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 4.8e-32 141.7 119 68.9
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 2.4e-31 139.4 111 72.1
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 3.1e-31 139.0 158 57.6
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 4.0e-31 138.7 138 52.2
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 7.6e-30 134.4 103 71.8
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 2.2e-29 132.9 106 70.8
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 1.4e-28 130.2 158 56.3
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 1.2e-27 127.1 158 54.4
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 1.2e-27 127.1 158 54.4
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 4.6e-27 125.2 92 75.0
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 6.7e-26 121.3 149 43.0
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 1.8e-23 113.2 81 79.0
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 1.1e-20 104.0 126 54.8
arahy.Tifrunner.gnm1.ann1.HFW61Q Arachis hypogaea HOM05D006161 ORTHO05D007483 9.6e-17 90.9 66 72.7
Pp3c24_330 Physcomitrium patens HOM05D006161 ORTHO05D007483 4.6e-11 72.0 138 36.2
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 4.6e-11 72.0 58 65.5
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 1.0e-10 70.9 128 42.2
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 1.8e-10 70.1 44 79.5
VMungo0540G0821 Vigna mungo HOM05D006161 ORTHO05D007483 1.1e-09 67.4 44 75.0
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 3.3e-09 65.9 143 32.2
Oeu011770.1 Olea europaea HOM05D004115 ORTHO05D005004 5.3e-07 58.5 42 69.0


User provided reference genes

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