Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G021602 Populus trichocarpa HOM05D008837 ORTHO05D006961 2.3e-42 175.3 94 100.0
Potri.015G004800 Populus trichocarpa HOM05D008837 ORTHO05D011237 2.5e-25 118.6 94 73.4
Sabra15G0003300 Salix brachista HOM05D008837 ORTHO05D006961 3.4e-22 108.2 94 67.0
Manes.05G197800 Manihot esculenta HOM05D008837 ORTHO05D011237 1.6e-11 72.8 96 52.1
COL.COLO4_14365 Corchorus olitorius HOM05D018669 ORTHO05D011237 7.9e-11 70.5 91 46.2
Actinidia08695 Actinidia chinensis HOM05D008837 ORTHO05D006961 1.0e-10 70.1 95 49.5
Thecc.03G208100 Theobroma cacao HOM05D018669 ORTHO05D011237 1.0e-10 70.1 94 50.0
Duzib205G1426 Durio zibethinus HOM05D018669 ORTHO05D011237 1.5e-09 66.2 94 45.7
Hma1.2p1_0415F.1_g148160 Hydrangea macrophylla HOM05D008837 ORTHO05D006961 1.5e-09 66.2 98 46.9
Ciclev10023060m.g Citrus clementina HOM05D008837 ORTHO05D006961 3.3e-09 65.1 98 45.9
Duzib205G1760 Durio zibethinus HOM05D008613 ORTHO05D006961 3.3e-09 65.1 96 46.9
PGR042G1156 Punica granatum HOM05D008837 ORTHO05D011237 3.3e-09 65.1 99 46.5
Gohir.A09G186700 Gossypium hirsutum HOM05D018669 ORTHO05D011237 4.3e-09 64.7 98 46.9
PGSC0003DMG400043889 Solanum tuberosum HOM05D008837 ORTHO05D006961 9.7e-09 63.5 104 45.2
CSS0023145 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 1.3e-08 63.2 94 46.8
CSS0022315 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 2.2e-08 62.4 93 44.1
Oeu061026.1 Olea europaea HOM05D008837 ORTHO05D006961 2.2e-08 62.4 94 45.7
Sabra05G0139300 Salix brachista HOM05D057032 ORTHO05D010393 2.8e-08 62.0 80 55.0
Thecc.03G217500 Theobroma cacao HOM05D008613 ORTHO05D006961 2.8e-08 62.0 96 43.8
Ciclev10017302m.g Citrus clementina HOM05D008837 ORTHO05D011237 8.2e-08 60.5 98 44.9
Dinv29215 Davidia involucrata HOM05D008837 ORTHO05D006961 1.1e-07 60.1 95 42.1
DCAR_020368 Daucus carota HOM05D008837 ORTHO05D006961 1.8e-07 59.3 94 46.8
DCAR_008982 Daucus carota HOM05D008837 ORTHO05D006961 2.4e-07 58.9 97 43.3
Eucgr.A01407 Eucalyptus grandis HOM05D008837 ORTHO05D011237 2.4e-07 58.9 94 43.6
Potri.001G450000 Populus trichocarpa HOM05D008613 ORTHO05D006961 3.1e-07 58.5 95 44.2
Sabra16G0303700 Salix brachista HOM05D008613 ORTHO05D006961 9.1e-07 57.0 104 40.4
Gohir.A02G099100 Gossypium hirsutum HOM05D008613 ORTHO05D006961 1.2e-06 56.6 95 41.1
Gohir.D09G181600 Gossypium hirsutum HOM05D018669 ORTHO05D011237 1.2e-06 56.6 101 42.6
Gorai.003G077900 Gossypium raimondii HOM05D008613 ORTHO05D006961 1.2e-06 56.6 95 41.1
Gorai.006G203600 Gossypium raimondii HOM05D018669 ORTHO05D011237 1.2e-06 56.6 94 41.5
Potri.001G449800 Populus trichocarpa HOM05D008613 ORTHO05D006961 1.2e-06 56.6 94 42.6
Potri.001G449900 Populus trichocarpa HOM05D008613 ORTHO05D006961 1.2e-06 56.6 94 42.6
Eucgr.A01409 Eucalyptus grandis HOM05D008837 ORTHO05D011237 1.5e-06 56.2 94 42.6
Sabra16G0303600 Salix brachista HOM05D008613 ORTHO05D006961 1.5e-06 56.2 104 40.4
TAR629G3181 Trochodendron aralioides HOM05D008613 ORTHO05D006961 1.5e-06 56.2 94 41.5
Solyc03g081330.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 2.0e-06 55.8 94 40.4
Gohir.D03G084800 Gossypium hirsutum HOM05D008613 ORTHO05D006961 2.6e-06 55.5 95 40.0
Atru.chr12.2412 Acer truncatum HOM05D008837 ORTHO05D011237 3.4e-06 55.1 94 43.6
Cc00_g29530 Coffea canephora HOM05D008837 ORTHO05D011237 3.4e-06 55.1 114 44.7
DCAR_020369 Daucus carota HOM05D008837 ORTHO05D011237 3.4e-06 55.1 91 38.5
Sabra16G0303800 Salix brachista HOM05D008613 ORTHO05D006961 3.4e-06 55.1 94 42.6
vmacro11487 Vaccinium macrocarpon HOM05D008613 ORTHO05D006961 3.4e-06 55.1 102 40.2
Nitab4.5_0000319g0150 Nicotiana tabacum HOM05D008837 ORTHO05D006961 4.5e-06 54.7 100 44.0
Rhsim03G0215000 Rhododendron simsii HOM05D000001 ORTHO05D000003 4.5e-06 54.7 99 42.4
Sabra16G0303900 Salix brachista HOM05D008613 ORTHO05D006961 4.5e-06 54.7 104 39.4
Solyc03g082350.2 Solanum lycopersicum HOM05D008837 ORTHO05D006961 4.5e-06 54.7 100 41.0
TWI15G0337 Tripterygium wilfordii HOM05D008613 ORTHO05D006961 4.5e-06 54.7 94 41.5
BcaB01g04281 Brassica carinata HOM05D011561 ORTHO05D011237 5.9e-06 54.3 99 37.4
Sabra16G0303500 Salix brachista HOM05D008613 ORTHO05D006961 5.9e-06 54.3 94 41.5
DCAR_008981 Daucus carota HOM05D008837 ORTHO05D011237 7.7e-06 53.9 97 43.3
Gorai.004G128500 Gossypium raimondii HOM05D008613 ORTHO05D006961 7.7e-06 53.9 96 41.7
Prupe.5G133100 Prunus persica HOM05D008613 ORTHO05D006961 7.7e-06 53.9 93 44.1
QL02p027286 Quercus lobata HOM05D008613 ORTHO05D006961 7.7e-06 53.9 100 39.0
PGSC0003DMG400003217 Solanum tuberosum HOM05D008837 ORTHO05D006961 7.7e-06 53.9 94 41.5


User provided reference genes

Program Settings