Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G019400 Populus trichocarpa HOM05D008225 ORTHO05D009677 1.0e-52 209.9 115 100.0
Potri.002G241300 Populus trichocarpa HOM05D008225 ORTHO05D009677 3.5e-29 131.7 117 70.1
CiPaw.04G106100 Carya illinoinensis HOM05D008225 ORTHO05D009677 1.5e-16 89.7 114 53.5
Cfa002561 Carpinus fangiana HOM05D008225 ORTHO05D009677 5.9e-16 87.8 113 47.8
Duzib138G0496 Durio zibethinus HOM05D008225 ORTHO05D009677 7.7e-16 87.4 119 50.4
Gohir.A08G194100 Gossypium hirsutum HOM05D008225 ORTHO05D009677 7.7e-16 87.4 118 53.4
Gohir.D08G211900 Gossypium hirsutum HOM05D008225 ORTHO05D009677 1.7e-15 86.3 116 53.4
Gorai.004G225300 Gossypium raimondii HOM05D008225 ORTHO05D009677 1.7e-15 86.3 116 53.4
QL09p054716 Quercus lobata HOM05D008225 ORTHO05D009677 2.9e-15 85.5 116 50.9
Duzib211G0631 Durio zibethinus HOM05D008225 ORTHO05D009677 5.0e-15 84.7 116 50.0
Prupe.8G204100 Prunus persica HOM05D008225 ORTHO05D009677 8.5e-15 84.0 111 46.8
Gohir.A07G156400 Gossypium hirsutum HOM05D008225 ORTHO05D009677 5.5e-14 81.3 117 49.6
Gohir.D07G162700 Gossypium hirsutum HOM05D008225 ORTHO05D009677 2.7e-13 79.0 117 50.4
Gorai.001G186300 Gossypium raimondii HOM05D008225 ORTHO05D009677 2.7e-13 79.0 117 50.4
Manes.12G052002 Manihot esculenta HOM05D008225 ORTHO05D009677 2.7e-13 79.0 117 50.4
CiPaw.03G150800 Carya illinoinensis HOM05D008225 ORTHO05D009677 1.0e-12 77.0 119 51.3
Thhalv10026616m.g Eutrema salsugineum HOM05D010094 ORTHO05D009677 2.5e-11 72.4 104 48.1
GSVIVG01028623001 Vitis vinifera HOM05D008225 ORTHO05D009677 2.2e-10 69.3 113 46.9
Hma1.2p1_1061F.1_g253430 Hydrangea macrophylla HOM05D008225 ORTHO05D009677 1.1e-09 67.0 116 47.4
Glyma.08G355400 Glycine max HOM05D008225 ORTHO05D009677 1.8e-09 66.2 113 42.5
A07p07470 Brassica napus HOM05D010094 ORTHO05D009677 2.4e-09 65.9 114 44.7
BraA07t28535Z Brassica rapa HOM05D010094 ORTHO05D009677 2.4e-09 65.9 114 44.7
RcHm_v2.0_Chr6g0285001 Rosa chinensis HOM05D008225 ORTHO05D009677 2.4e-09 65.9 112 44.6
THA.LOC104808782 Tarenaya hassleriana HOM05D010094 ORTHO05D009677 2.4e-09 65.9 120 41.7
Thhalv10002739m.g Eutrema salsugineum HOM05D010094 ORTHO05D009677 3.1e-09 65.5 104 47.1
AT3G24770 Arabidopsis thaliana HOM05D010094 ORTHO05D009677 4.1e-09 65.1 104 45.2
BcaC01g03255 Brassica carinata HOM05D010094 ORTHO05D009677 4.1e-09 65.1 103 44.7
BolC3t17714H Brassica oleracea HOM05D010094 ORTHO05D009677 4.1e-09 65.1 103 44.7
BcaB03g14566 Brassica carinata HOM05D010094 ORTHO05D009677 6.9e-09 64.3 114 42.1
C07p11260 Brassica napus HOM05D010094 ORTHO05D009677 9.1e-09 63.9 114 43.0
Nn1g07812 Nelumbo nucifera HOM05D008225 ORTHO05D009677 1.5e-08 63.2 98 48.0
Lalb_Chr01g0022391 Lupinus albus HOM05D008225 ORTHO05D009677 2.0e-08 62.8 113 40.7
Actinidia30086 Actinidia chinensis HOM05D008225 ORTHO05D009677 2.6e-08 62.4 114 44.7
THA.LOC104804606 Tarenaya hassleriana HOM05D010094 ORTHO05D009677 2.6e-08 62.4 67 58.2
VMungo1383G1963 Vigna mungo HOM05D008225 ORTHO05D009677 3.4e-08 62.0 114 41.2
Phvul.008G124100 Phaseolus vulgaris HOM05D008225 ORTHO05D009677 4.5e-08 61.6 113 41.6
BcaB06g26695 Brassica carinata HOM05D010094 ORTHO05D009677 5.9e-08 61.2 113 45.1
Thecc.01G227200 Theobroma cacao HOM05D008225 ORTHO05D009677 5.9e-08 61.2 127 41.7
Cpa.g.sc8.165 Carica papaya HOM05D006066 ORTHO05D007720 7.7e-08 60.8 121 43.0
TWI36G1499 Tripterygium wilfordii HOM05D008225 ORTHO05D009677 7.7e-08 60.8 88 53.4
BcaC06g35752 Brassica carinata HOM05D010094 ORTHO05D009677 1.0e-07 60.5 114 41.2
BolC7t41602H Brassica oleracea HOM05D010094 ORTHO05D009677 1.0e-07 60.5 114 41.2
Glyma.18G171800 Glycine max HOM05D008225 ORTHO05D009677 2.2e-07 59.3 113 40.7
C03p54280 Brassica napus HOM05D010094 ORTHO05D009677 2.9e-07 58.9 105 42.9
Oeu015897.1 Olea europaea HOM05D008225 ORTHO05D009677 2.9e-07 58.9 107 38.3
A03p43930 Brassica napus HOM05D010094 ORTHO05D009677 3.8e-07 58.5 104 41.3
BraA03t13523Z Brassica rapa HOM05D010094 ORTHO05D009677 3.8e-07 58.5 104 41.3
Carub.0003s2517 Capsella rubella HOM05D010094 ORTHO05D009677 5.0e-07 58.2 105 44.8
FvH4_2g19210 Fragaria vesca HOM05D008225 ORTHO05D009677 5.0e-07 58.2 106 45.3
Nn3g19944 Nelumbo nucifera HOM05D008225 ORTHO05D009677 6.5e-07 57.8 109 44.0
Lalb_Chr03g0041841 Lupinus albus HOM05D008225 ORTHO05D009677 8.5e-07 57.4 113 39.8
CARHR101130 Cardamine hirsuta HOM05D010094 ORTHO05D009677 2.5e-06 55.8 81 46.9
FAN15G1086 Fragaria x ananassa HOM05D008225 ORTHO05D009677 2.5e-06 55.8 106 43.4
AL3G40510 Arabidopsis lyrata HOM05D010094 ORTHO05D009677 4.2e-06 55.1 81 44.4
Dinv04656 Davidia involucrata HOM05D002283 ORTHO05D005725 4.2e-06 55.1 92 44.6
Oeu022260.2 Olea europaea HOM05D008225 ORTHO05D009677 7.2e-06 54.3 115 39.1
Actinidia23250 Actinidia chinensis HOM05D012898 ORTHO05D009356 9.4e-06 53.9 45 68.9
Manes.13G045100 Manihot esculenta HOM05D008225 ORTHO05D009677 9.4e-06 53.9 45 66.7
Sp3g22520 Schrenkiella parvula HOM05D010094 ORTHO05D009677 9.4e-06 53.9 114 39.5


User provided reference genes

Program Settings