Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G169200 Populus trichocarpa HOM05D005664 ORTHO05D006509 0.0e+00 1423.7 726 100.0
Sabra11G0137600 Salix brachista HOM05D005664 ORTHO05D006509 0.0e+00 1236.9 733 88.4
Potri.001G472600 Populus trichocarpa HOM05D005664 ORTHO05D006509 0.0e+00 1142.1 736 81.8
Sabra16G0320800 Salix brachista HOM05D005664 ORTHO05D006509 9.9e-311 1069.7 719 79.8
Manes.01G007400 Manihot esculenta HOM05D005664 ORTHO05D006509 2.9e-230 802.4 737 63.0
Manes.01G007300 Manihot esculenta HOM05D005664 ORTHO05D006509 4.9e-217 758.4 738 61.1
Thecc.07G000900 Theobroma cacao HOM05D005664 ORTHO05D006509 6.2e-180 635.2 767 52.4
Ciclev10007600m.g Citrus clementina HOM05D005664 ORTHO05D006509 9.0e-179 631.3 742 52.4
QL08p000429 Quercus lobata HOM05D005664 ORTHO05D006509 1.2e-178 630.9 754 51.2
Dinv40921 Davidia involucrata HOM05D005664 ORTHO05D006509 1.4e-176 624.0 729 53.2
Atru.chr2.3903 Acer truncatum HOM05D005664 ORTHO05D006509 3.0e-174 616.3 747 51.8
Dinv19639 Davidia involucrata HOM05D005664 ORTHO05D006509 4.5e-170 602.4 730 51.8
Cfa016966 Carpinus fangiana HOM05D005664 ORTHO05D006509 1.0e-166 591.3 733 52.0
Duzib170G1037 Durio zibethinus HOM05D005664 ORTHO05D006509 2.8e-164 583.2 766 49.5
Haze_09920 Corylus avellana HOM05D005664 ORTHO05D006509 2.4e-163 580.1 754 50.7
Duzib268G0032 Durio zibethinus HOM05D005664 ORTHO05D006509 1.9e-157 560.5 759 48.4
CSS0015837 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 1.0e-153 548.1 739 49.1
Hma1.2p1_0193F.1_g084390 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 3.8e-153 546.2 758 48.0
CSS0022030 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 4.2e-152 542.7 804 46.4
Gohir.D13G131600 Gossypium hirsutum HOM05D005664 ORTHO05D006509 1.0e-150 538.1 769 47.5
COL.COLO4_30921 Corchorus olitorius HOM05D005664 ORTHO05D006509 8.8e-150 535.0 736 48.9
Gorai.013G147600 Gossypium raimondii HOM05D005664 ORTHO05D006509 1.1e-149 534.6 769 47.2
Cpa.g.sc12.60 Carica papaya HOM05D005664 ORTHO05D006509 9.7e-149 531.6 817 45.4
TAR627G1206 Trochodendron aralioides HOM05D005664 ORTHO05D006509 5.3e-147 525.8 751 46.7
Eucgr.F01983 Eucalyptus grandis HOM05D005664 ORTHO05D006509 1.4e-144 517.7 775 44.9
Prupe.6G035900 Prunus persica HOM05D005664 ORTHO05D006509 1.4e-144 517.7 767 46.3
CiPaw.12G143100 Carya illinoinensis HOM05D005664 ORTHO05D006509 9.4e-144 515.0 736 47.3
TWI39G0285 Tripterygium wilfordii HOM05D005664 ORTHO05D006509 1.5e-141 507.7 760 44.5
MD11G1047100 Malus domestica HOM05D005664 ORTHO05D006509 4.4e-141 506.1 769 47.3
vmacro11645 Vaccinium macrocarpon HOM05D005664 ORTHO05D006509 4.8e-140 502.7 776 44.6
Gohir.A13G128200 Gossypium hirsutum HOM05D005664 ORTHO05D006509 6.3e-140 502.3 751 46.5
MD03G1043600 Malus domestica HOM05D005664 ORTHO05D006509 2.9e-137 493.4 763 45.7
Actinidia30345 Actinidia chinensis HOM05D005664 ORTHO05D006509 1.1e-136 491.5 759 45.5
Nn1g09430 Nelumbo nucifera HOM05D005664 ORTHO05D006509 1.5e-136 491.1 877 39.8
TAR629G3046 Trochodendron aralioides HOM05D005664 ORTHO05D006509 6.7e-134 482.3 727 45.1
Nn7g37452 Nelumbo nucifera HOM05D005664 ORTHO05D006509 8.2e-132 475.3 908 38.0
MELO3C013227.2 Cucumis melo HOM05D005664 ORTHO05D006509 5.3e-131 472.6 738 42.8
Rhsim06G0235600 Rhododendron simsii HOM05D005664 ORTHO05D006509 1.5e-128 464.5 752 43.9
CsaV3_7G021290 Cucumis sativus L. HOM05D005664 ORTHO05D006509 3.2e-128 463.4 738 42.7
FvH4_3g41520 Fragaria vesca HOM05D005664 ORTHO05D006509 1.4e-126 458.0 756 43.7
FAN16G2562 Fragaria x ananassa HOM05D005664 ORTHO05D006509 5.2e-126 456.1 759 43.5
ClCG09G021770 Citrullus lanatus HOM05D005664 ORTHO05D006509 5.7e-125 452.6 740 41.2
FAN11G0133 Fragaria x ananassa HOM05D005664 ORTHO05D006509 7.5e-125 452.2 759 44.0
FAN25G3031 Fragaria x ananassa HOM05D005664 ORTHO05D006509 9.1e-123 445.3 761 43.1
Oeu052022.1 Olea europaea HOM05D005664 ORTHO05D006509 2.2e-121 440.7 749 42.5
Cc05_g15770 Coffea canephora HOM05D005664 ORTHO05D006509 3.2e-120 436.8 749 42.2
RcHm_v2.0_Chr5g0074471 Rosa chinensis HOM05D005664 ORTHO05D006509 2.8e-119 433.7 755 42.5
FAN21G3314 Fragaria x ananassa HOM05D005664 ORTHO05D006509 3.5e-114 416.8 741 42.8
Oeu015275.1 Olea europaea HOM05D005664 ORTHO05D006509 5.9e-114 416.0 752 40.8
CSS0025023 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 5.6e-112 409.5 716 42.0
Sed0014853 Sechium edule HOM05D005664 ORTHO05D006509 8.9e-110 402.1 737 40.3
THA.LOC104813471 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 1.2e-109 401.7 766 38.5
MSTRG.16129 Avicennia marina HOM05D005664 ORTHO05D006509 4.6e-106 389.8 749 39.4
DCAR_016806 Daucus carota HOM05D005664 ORTHO05D006509 1.5e-104 384.8 738 40.0
CAN.G492.59 Capsicum annuum HOM05D005664 ORTHO05D006509 5.6e-104 382.9 753 40.1
MBI14_g10255_MAGBIO Magnolia biondii HOM05D005664 ORTHO05D006509 2.1e-103 380.9 761 40.2
Sed0021044 Sechium edule HOM05D005664 ORTHO05D006509 8.0e-103 379.0 718 38.9
THA.LOC104813465 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 4.0e-102 376.7 768 38.3
PGSC0003DMG400011270 Solanum tuberosum HOM05D005664 ORTHO05D006509 1.5e-101 374.8 756 40.2
Sopen10g001670 Solanum pennellii HOM05D005664 ORTHO05D006509 2.7e-98 364.0 756 40.1
Solyc10g005700.3 Solanum lycopersicum HOM05D005664 ORTHO05D006509 6.6e-97 359.4 756 39.8
SalBow8G4453 Salvia bowleyana HOM05D005664 ORTHO05D006509 2.0e-93 347.8 718 38.4
Hma1.2p1_0321F.1_g124370 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 2.6e-93 347.4 727 38.4
Nitab4.5_0000611g0180 Nicotiana tabacum HOM05D005664 ORTHO05D006509 8.3e-92 342.4 738 38.2
PGSC0003DMG400002313 Solanum tuberosum HOM05D005664 ORTHO05D006509 8.3e-92 342.4 750 38.4
PSO063G4895 Papaver somniferum HOM05D005664 ORTHO05D006509 2.1e-90 337.8 747 36.9
Solyc12g017230.2 Solanum lycopersicum HOM05D005664 ORTHO05D006509 2.1e-90 337.8 760 38.2
Carub.0007s1448 Capsella rubella HOM05D005664 ORTHO05D006509 3.5e-90 337.0 779 36.7
Nitab4.5_0001622g0140 Nicotiana tabacum HOM05D005664 ORTHO05D006509 3.5e-90 337.0 723 37.6
Sopen12g008050 Solanum pennellii HOM05D005664 ORTHO05D006509 2.3e-89 334.3 759 37.8
Sp7g24360 Schrenkiella parvula HOM05D005664 ORTHO05D006509 3.0e-89 334.0 772 36.8
PSO782G2174 Papaver somniferum HOM05D005664 ORTHO05D006509 3.3e-88 330.5 747 36.4
CAN.G8.46 Capsicum annuum HOM05D005664 ORTHO05D006509 7.3e-88 329.3 763 37.2
Lj3g0022247 Lotus japonicus HOM05D005664 ORTHO05D006509 2.3e-86 324.3 746 35.3
Migut.M01578 Erythranthe guttata HOM05D005664 ORTHO05D006509 4.0e-86 323.6 736 36.7
AL7G26500 Arabidopsis lyrata HOM05D005664 ORTHO05D006509 1.2e-85 322.0 781 35.9
AT4G26450 Arabidopsis thaliana HOM05D005664 ORTHO05D006509 1.2e-85 322.0 775 34.8
Aqoxy1G04294 Aquilegia oxysepala HOM05D005664 ORTHO05D006509 2.6e-85 320.9 776 36.9
arahy.Tifrunner.gnm1.ann1.C46LV5 Arachis hypogaea HOM05D005664 ORTHO05D006509 1.4e-83 315.1 742 36.3
Aa31LG5G11790 Aethionema arabicum HOM05D005664 ORTHO05D006509 4.1e-83 313.5 754 35.3
unitig_37.g12212 Utricularia gibba HOM05D005664 ORTHO05D006509 2.1e-82 311.2 745 34.9
Peaxi162Scf00006g00092 Petunia axillaris HOM05D005664 ORTHO05D006509 2.7e-82 310.8 747 36.8
Thhalv10024531m.g Eutrema salsugineum HOM05D005664 ORTHO05D006509 7.8e-82 309.3 784 34.8
SGA_v2.0_scaffold186G40232 Striga asiatica HOM05D005664 ORTHO05D006509 3.0e-81 307.4 751 35.2
CARHR234010 Cardamine hirsuta HOM05D005664 ORTHO05D006509 2.1e-79 301.2 792 35.2
Lalb_Chr18g0048701 Lupinus albus HOM05D005664 ORTHO05D006509 2.1e-79 301.2 759 35.6
arahy.Tifrunner.gnm1.ann1.GFW533 Arachis hypogaea HOM05D005664 ORTHO05D006509 3.4e-77 293.9 728 35.7
Glyma.04G114300 Glycine max HOM05D005664 ORTHO05D006509 2.9e-76 290.8 728 35.3
Lalb_Chr15g0079911 Lupinus albus HOM05D005664 ORTHO05D006509 1.3e-73 282.0 703 32.7
Phvul.005G005100 Phaseolus vulgaris HOM05D005664 ORTHO05D006509 1.7e-73 281.6 751 34.1
Glyma.06G321000 Glycine max HOM05D005664 ORTHO05D006509 1.9e-72 278.1 709 35.7
VMungo1080G0452 Vigna mungo HOM05D005664 ORTHO05D006509 1.4e-70 271.9 751 35.6
A03p56710 Brassica napus HOM05D005664 ORTHO05D006509 9.0e-70 269.2 792 32.4
BraA03t14741Z Brassica rapa HOM05D005664 ORTHO05D006509 9.0e-70 269.2 792 32.4
TPR.G16700 Trifolium pratense HOM05D005664 ORTHO05D006509 1.5e-69 268.5 785 33.6
Lsat_1_v5_gn_7_115861 Lactuca sativa HOM05D005664 ORTHO05D006509 2.6e-69 267.7 735 32.2
C07p54910 Brassica napus HOM05D005664 ORTHO05D006509 7.6e-69 266.2 782 33.0
BolC7t45979H Brassica oleracea HOM05D005664 ORTHO05D006509 7.6e-69 266.2 782 33.0
Oeu062669.1 Olea europaea HOM05D005664 ORTHO05D006509 2.9e-68 264.2 722 34.6
CDE11G0421 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 3.2e-67 260.8 763 32.5
HanXRQChr17g0546881 Helianthus annuus HOM05D005664 ORTHO05D006509 4.2e-67 260.4 735 34.6
C01p22360 Brassica napus HOM05D005664 ORTHO05D006509 5.4e-67 260.0 774 34.6
BraA01t01725Z Brassica rapa HOM05D005664 ORTHO05D006509 1.0e-65 255.8 778 33.7
BcaC09g50709 Brassica carinata HOM05D005664 ORTHO05D006509 5.1e-65 253.4 774 33.5
Medtr3g009540 Medicago truncatula HOM05D005664 ORTHO05D006509 8.7e-65 252.7 732 33.7
A01p17690 Brassica napus HOM05D005664 ORTHO05D006509 1.1e-64 252.3 779 34.0
BcaC06g32747 Brassica carinata HOM05D005664 ORTHO05D006509 1.9e-64 251.5 794 32.1
BolC1t02167H Brassica oleracea HOM05D005664 ORTHO05D006509 3.7e-63 247.3 778 34.3
CDE05G2921 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 4.0e-62 243.8 757 31.2
Psat5g231360 Pisum sativum HOM05D005664 ORTHO05D006509 9.0e-62 242.7 803 33.4
Hund01929 Selenicereus undatus HOM05D005664 ORTHO05D006509 3.4e-61 240.7 702 31.8
Ca_14130_v3 Cicer arietinum L. HOM05D005664 ORTHO05D006509 1.3e-60 238.8 700 34.4
AUR62040680 Chenopodium quinoa HOM05D005664 ORTHO05D006509 4.9e-60 236.9 700 33.7
Sc03g0011800 Simmondsia chinensis HOM05D005664 ORTHO05D006509 1.4e-59 235.3 748 33.4
AUR62015929 Chenopodium quinoa HOM05D005664 ORTHO05D006509 2.4e-59 234.6 695 34.8
CANSAT11G1251 Cannabis sativa HOM05D005664 ORTHO05D006509 5.6e-56 223.4 717 32.2
EL10Ac4g07635 Beta vulgaris HOM05D005664 ORTHO05D006509 9.6e-56 222.6 710 33.4
Hund01927 Selenicereus undatus HOM05D005664 ORTHO05D006509 2.0e-53 214.9 684 31.4
Lj1A901T36 Lonicera japonica HOM05D005664 ORTHO05D006509 1.0e-49 202.6 298 46.0
unitig_46.g18526 Utricularia gibba HOM05D005664 ORTHO05D006509 7.4e-48 196.4 662 31.3
ECA236G2587 Erigeron canadensis HOM05D005664 ORTHO05D006509 2.4e-46 191.4 729 30.5
MSTRG.13052 Avicennia marina HOM05D005664 ORTHO05D006509 1.0e-44 186.0 560 34.5
GSVIVG01014850001 Vitis vinifera HOM05D005664 ORTHO05D006509 3.2e-43 181.0 174 58.0
Ah.04g166380 Amaranthus hybridus HOM05D005664 ORTHO05D006509 5.1e-41 173.7 698 30.7
Ah.06g181030 Amaranthus hybridus HOM05D000037 ORTHO05D006509 1.9e-40 171.8 702 29.1
Lj1A901G38 Lonicera japonica HOM05D005664 ORTHO05D006509 1.7e-31 142.1 124 59.7
Migut.H01706 Erythranthe guttata HOM05D005664 ORTHO05D006509 3.7e-31 141.0 756 28.0
ATR0021G035 Amborella trichopoda HOM05D005664 ORTHO05D006509 3.4e-29 134.4 845 27.2
HPP92_019365 Vanilla planifolia HOM05D005664 ORTHO05D006509 1.0e-20 106.3 765 26.0
Zm00001eb422560 Zea mays HOM05D019841 ORTHO05D006509 2.3e-17 95.1 787 24.9
Zm00001eb082760 Zea mays HOM05D019841 ORTHO05D006509 1.8e-14 85.5 837 24.0
MSTRG.7045 Avicennia marina HOM05D005664 ORTHO05D006509 1.7e-12 79.0 95 44.2
SEGI_32826 Sequoiadendron giganteum HOM05D005664 ORTHO05D006509 5.0e-12 77.4 401 29.4
HPP92_028056 Vanilla planifolia HOM05D005664 ORTHO05D006509 2.1e-10 72.0 223 36.8
Psat6g196680 Pisum sativum HOM05D005664 ORTHO05D006509 8.0e-10 70.1 115 36.5
Actinidia33104 Actinidia chinensis HOM05D005664 ORTHO05D006509 2.3e-09 68.6 49 69.4


User provided reference genes

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