Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 5.6e-87 324.3 172 100.0
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 5.1e-72 274.6 171 87.1
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 8.7e-56 220.7 273 53.1
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 1.2e-44 183.7 143 73.4
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 1.7e-43 179.9 173 62.4
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 2.5e-39 166.0 160 59.4
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 9.6e-39 164.1 138 68.8
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 1.3e-38 163.7 138 68.8
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 1.6e-38 163.3 138 68.1
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 2.1e-38 162.9 167 59.3
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 6.2e-38 161.4 127 70.9
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 8.2e-38 161.0 153 59.5
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 2.6e-36 156.0 113 73.5
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 5.8e-36 154.8 147 57.8
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 7.6e-36 154.5 171 55.6
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 1.3e-35 153.7 122 68.0
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 8.4e-35 151.0 130 66.2
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 1.4e-34 150.2 146 58.2
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 1.9e-34 149.8 135 59.3
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 1.9e-34 149.8 131 61.1
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.9e-34 149.8 131 61.1
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 2.5e-34 149.4 135 58.5
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 3.2e-34 149.1 135 65.2
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 7.1e-34 147.9 135 58.5
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 7.1e-34 147.9 146 57.5
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 7.1e-34 147.9 121 64.5
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 7.1e-34 147.9 105 71.4
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 7.1e-34 147.9 131 60.3
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 9.3e-34 147.5 146 56.8
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 9.3e-34 147.5 120 64.2
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 1.6e-33 146.7 118 70.3
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 2.1e-33 146.4 120 63.3
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 2.1e-33 146.4 120 63.3
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 3.5e-33 145.6 133 67.7
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 3.5e-33 145.6 122 64.8
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 4.6e-33 145.2 146 57.5
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 6.0e-33 144.8 106 72.6
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 7.9e-33 144.4 148 59.5
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 7.9e-33 144.4 148 59.5
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 7.9e-33 144.4 148 59.5
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 7.9e-33 144.4 148 59.5
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 1.3e-32 143.7 166 52.4
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.3e-32 143.7 148 59.5
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.3e-32 143.7 148 58.8
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 1.3e-32 143.7 156 52.6
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 1.8e-32 143.3 143 57.3
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 1.8e-32 143.3 168 52.4
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 2.3e-32 142.9 144 56.2
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 3.0e-32 142.5 117 65.0
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 3.0e-32 142.5 148 60.1
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 3.0e-32 142.5 176 51.7
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 8.7e-32 141.0 137 59.9
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.5e-31 139.4 148 58.1
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 2.5e-31 139.4 125 66.4
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 4.3e-31 138.7 113 65.5
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 4.8e-30 135.2 146 52.7
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 6.3e-30 134.8 94 71.3
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.4e-29 133.7 137 55.5
Sabra11G0132200 Salix brachista HOM05D008080 ORTHO05D010244 2.2e-27 126.3 155 53.5
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 3.8e-27 125.6 92 78.3
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 1.4e-26 123.6 117 57.3
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.2e-25 120.6 148 54.1
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.2e-25 120.6 148 54.1
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 6.1e-25 118.2 159 48.4
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 3.7e-22 109.0 106 52.8
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 3.7e-22 109.0 106 52.8
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 1.4e-21 107.1 82 63.4
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 1.6e-17 93.6 67 76.1
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 1.8e-16 90.1 56 80.4
Cpa.g.sc37.123 Carica papaya HOM05D008080 ORTHO05D010244 8.2e-14 81.3 119 52.9
Eucgr.D02545 Eucalyptus grandis HOM05D008080 ORTHO05D010244 3.1e-13 79.3 55 74.5
CBR_g15957 Chara braunii HOM05D000019 ORTHO05D000002 7.7e-12 74.7 97 42.3


User provided reference genes

Program Settings