Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 7.9e-189 663.7 350 100.0
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 6.3e-170 600.9 383 85.9
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 1.8e-169 599.4 383 85.9
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 1.3e-151 540.0 352 77.6
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 2.9e-151 538.9 335 83.3
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 1.9e-150 536.2 356 79.2
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 9.4e-150 533.9 352 78.1
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 2.1e-149 532.7 338 82.5
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 3.6e-149 531.9 338 81.7
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 4.7e-149 531.6 350 78.0
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 1.8e-148 529.6 333 83.2
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 5.2e-148 528.1 354 78.8
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 3.3e-147 525.4 352 78.4
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 7.5e-147 524.2 343 78.1
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 9.7e-147 523.9 335 80.6
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 1.3e-146 523.5 357 77.0
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 2.2e-146 522.7 355 78.3
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 3.7e-146 521.9 368 76.6
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 3.7e-146 521.9 352 78.1
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 3.7e-146 521.9 351 77.5
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 4.8e-146 521.5 350 77.4
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 1.1e-145 520.4 339 79.6
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 2.4e-145 519.2 353 77.1
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 4.1e-145 518.5 342 78.7
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 4.1e-145 518.5 341 79.5
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 7.0e-145 517.7 339 77.6
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 7.0e-145 517.7 336 79.5
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 3.5e-144 515.4 337 80.1
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 3.5e-144 515.4 337 80.1
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 3.5e-144 515.4 351 77.8
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 4.5e-144 515.0 349 76.5
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 4.5e-144 515.0 337 77.4
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 7.7e-144 514.2 356 76.7
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 1.0e-143 513.8 334 79.3
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 1.3e-143 513.5 350 76.9
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 2.9e-143 512.3 345 76.8
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 5.0e-143 511.5 355 76.6
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 6.5e-143 511.1 333 80.2
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 1.1e-142 510.4 347 76.4
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 1.5e-142 510.0 344 78.2
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 1.9e-142 509.6 338 78.1
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 3.2e-142 508.8 341 77.7
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 5.5e-142 508.1 354 76.6
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 7.2e-142 507.7 338 77.5
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 1.6e-141 506.5 358 75.1
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 2.1e-141 506.1 338 78.1
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.1e-141 506.1 358 75.4
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 4.7e-141 505.0 341 78.3
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 6.1e-141 504.6 348 74.4
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 1.0e-140 503.8 343 77.0
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 1.0e-140 503.8 333 79.3
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 1.8e-140 503.1 351 77.2
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 2.3e-140 502.7 356 73.6
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 4.0e-140 501.9 355 73.5
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 4.0e-140 501.9 355 73.5
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 4.0e-140 501.9 356 73.6
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 4.0e-140 501.9 351 76.9
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 5.2e-140 501.5 346 76.6
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 8.8e-140 500.7 344 77.0
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 8.8e-140 500.7 336 78.6
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 8.8e-140 500.7 346 76.3
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 2.0e-139 499.6 341 75.7
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 2.6e-139 499.2 355 76.1
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 2.6e-139 499.2 358 74.3
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 3.4e-139 498.8 348 73.3
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 3.4e-139 498.8 351 75.2
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 4.4e-139 498.4 351 76.4
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 7.5e-139 497.7 341 75.7
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 9.8e-139 497.3 355 73.2
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 2.8e-138 495.7 353 76.2
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 6.3e-138 494.6 343 76.7
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 4.1e-137 491.9 333 78.4
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 5.4e-137 491.5 359 74.4
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 5.4e-137 491.5 338 78.7
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 3.5e-136 488.8 334 76.9
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 2.3e-135 486.1 355 73.2
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 1.9e-134 483.0 353 74.2
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 3.3e-134 482.3 328 77.1
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 9.5e-134 480.7 337 76.3
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 2.8e-133 479.2 336 75.0
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 8.0e-133 477.6 334 73.1
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 1.8e-132 476.5 349 73.9
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 2.7e-128 462.6 334 71.3
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 1.3e-127 460.3 334 72.5
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 1.8e-124 449.9 298 79.9
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 3.0e-124 449.1 339 72.6
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 8.9e-124 447.6 269 85.5
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 1.3e-122 443.7 329 69.9
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 4.6e-120 435.3 269 82.5
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 1.0e-111 407.5 329 61.1
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 5.6e-110 401.7 364 62.4
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 4.0e-108 395.6 336 59.2
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.3e-106 390.6 267 76.8
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 3.4e-99 365.9 332 59.6
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 3.2e-89 332.8 242 72.7
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 3.5e-88 329.3 284 65.5
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 1.4e-76 290.8 243 60.9
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 4.0e-76 289.3 270 60.4
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 1.3e-74 284.3 342 47.7
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 2.7e-72 276.6 327 48.3
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 3.7e-69 266.2 228 67.5
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 4.9e-66 255.8 358 48.6
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 9.3e-65 251.5 155 83.2
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 1.0e-63 248.1 287 49.5
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.5e-62 243.4 191 68.1
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 1.1e-60 238.0 333 43.8
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 1.4e-57 227.6 208 58.7
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.3e-53 214.5 186 65.6
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 2.7e-48 196.8 184 57.1
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 5.1e-47 192.6 140 71.4
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 1.1e-44 184.9 154 61.7
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.9e-42 176.8 114 79.8
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 4.7e-40 169.5 262 41.6
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 1.1e-38 164.9 91 91.2
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 9.7e-30 135.2 131 54.2
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 5.5e-25 119.4 66 90.9
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 7.5e-22 109.0 57 94.7
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 1.6e-19 101.3 122 50.8
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 2.7e-19 100.5 86 54.7
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 1.3e-13 81.6 43 95.3
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 3.7e-13 80.1 46 87.0
Zm00001eb241410 Zea mays HOM05D006520 ORTHO05D442212 2.3e-07 60.8 49 57.1


User provided reference genes

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