Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G130400 Populus trichocarpa HOM05D020515 ORTHO05D009427 1.2e-66 256.5 141 100.0
Potri.001G409600 Populus trichocarpa HOM05D020515 ORTHO05D009427 3.8e-41 171.8 140 72.9
Sabra16G0281500 Salix brachista HOM05D020515 ORTHO05D009427 3.4e-34 148.7 141 61.0
Sabra11G0117700 Salix brachista HOM05D020515 ORTHO05D000001 6.1e-23 111.3 120 56.7
Manes.15G079100 Manihot esculenta HOM05D020515 ORTHO05D009427 2.0e-18 96.3 147 44.2
Prupe.4G197700 Prunus persica HOM05D009454 ORTHO05D009427 2.1e-15 86.3 141 40.4
Haze_09576 Corylus avellana HOM05D009454 ORTHO05D009427 7.4e-13 77.8 140 42.1
Manes.03G120500 Manihot esculenta HOM05D020515 ORTHO05D009427 6.3e-12 74.7 145 40.0
TWI38G2182 Tripterygium wilfordii HOM05D009454 ORTHO05D009427 6.3e-12 74.7 151 40.4
TWI38G2011 Tripterygium wilfordii HOM05D010083 ORTHO05D009427 2.4e-11 72.8 155 40.0
Ciclev10009866m.g Citrus clementina HOM05D009454 ORTHO05D009427 1.2e-10 70.5 145 37.2
CiPaw.11G180600 Carya illinoinensis HOM05D009454 ORTHO05D009427 1.7e-09 66.6 139 38.8
Dinv18549 Davidia involucrata HOM05D014456 ORTHO05D011476 2.9e-09 65.9 138 38.4
ClCG10G006150 Citrullus lanatus HOM05D023599 ORTHO05D009427 3.8e-09 65.5 143 35.0
MD11G1229800 Malus domestica HOM05D023596 ORTHO05D009427 5.0e-09 65.1 139 37.4
Duzib213G0681 Durio zibethinus HOM05D009454 ORTHO05D009427 1.1e-08 63.9 148 36.5
TAR627G0356 Trochodendron aralioides HOM05D009454 ORTHO05D009427 1.1e-08 63.9 136 36.8
CARHR267870 Cardamine hirsuta HOM05D010083 ORTHO05D009427 1.9e-08 63.2 144 35.4
MELO3C016602.2 Cucumis melo HOM05D023599 ORTHO05D009427 2.5e-08 62.8 147 35.4
Migut.M01827 Erythranthe guttata HOM05D017288 ORTHO05D009427 2.5e-08 62.8 143 35.0
arahy.Tifrunner.gnm1.ann1.T2T8RF Arachis hypogaea HOM05D012347 ORTHO05D009427 3.2e-08 62.4 141 35.5
CsaV3_3G005700 Cucumis sativus L. HOM05D023599 ORTHO05D009427 3.2e-08 62.4 144 34.0
Oeu042882.1 Olea europaea HOM05D017288 ORTHO05D017865 3.2e-08 62.4 136 36.8
TAR629G2024 Trochodendron aralioides HOM05D009454 ORTHO05D009427 3.2e-08 62.4 139 37.4
Actinidia35306 Actinidia chinensis HOM05D009454 ORTHO05D009427 4.2e-08 62.0 135 31.1
arahy.Tifrunner.gnm1.ann1.4E7PXM Arachis hypogaea HOM05D012347 ORTHO05D009427 9.4e-08 60.8 141 35.5
EL10Ac4g08003 Beta vulgaris HOM05D017899 ORTHO05D009427 9.4e-08 60.8 146 34.9
Sed0000886 Sechium edule HOM05D023599 ORTHO05D009427 1.6e-07 60.1 144 33.3
Dinv10899 Davidia involucrata HOM05D012535 ORTHO05D011476 2.7e-07 59.3 135 32.6
BcaB01g04301 Brassica carinata HOM05D010083 ORTHO05D009427 6.1e-07 58.2 142 34.5
Aa31LG3G10530 Aethionema arabicum HOM05D010083 ORTHO05D009427 8.0e-07 57.8 138 34.1
MSTRG.12947 Avicennia marina HOM05D017288 ORTHO05D009427 8.0e-07 57.8 140 36.4
Carub.0008s1485 Capsella rubella HOM05D010083 ORTHO05D009427 8.0e-07 57.8 142 36.6
Dinv03958 Davidia involucrata HOM05D009454 ORTHO05D009427 8.0e-07 57.8 143 33.6
Solyc07g063910.4 Solanum lycopersicum HOM05D017076 ORTHO05D017865 8.0e-07 57.8 136 36.8
MD03G1215100 Malus domestica HOM05D009454 ORTHO05D009427 2.3e-06 56.2 95 44.2
Aqoxy4G01911 Aquilegia oxysepala HOM05D035254 ORTHO05D031288 3.0e-06 55.8 138 32.6
AL8G30040 Arabidopsis lyrata HOM05D010083 ORTHO05D009427 3.0e-06 55.8 142 33.8
BolC3t14114H Brassica oleracea HOM05D010083 ORTHO05D009427 3.0e-06 55.8 143 37.8
Duzib170G0628 Durio zibethinus HOM05D009454 ORTHO05D009427 3.0e-06 55.8 141 36.9
Hund02152 Selenicereus undatus HOM05D017899 ORTHO05D009427 4.0e-06 55.5 146 30.8
Peaxi162Scf01365g00030 Petunia axillaris HOM05D017076 ORTHO05D017865 5.2e-06 55.1 137 36.5
Actinidia10697 Actinidia chinensis HOM05D009454 ORTHO05D009427 6.7e-06 54.7 144 32.6
BcaC01g06313 Brassica carinata HOM05D010083 ORTHO05D009427 6.7e-06 54.7 137 37.2
C03p17020 Brassica napus HOM05D010083 ORTHO05D009427 6.7e-06 54.7 137 37.2
Actinidia39291 Actinidia chinensis HOM05D014456 ORTHO05D011476 8.8e-06 54.3 141 33.3
BcaB08g35816 Brassica carinata HOM05D010083 ORTHO05D009427 8.8e-06 54.3 140 35.0
A10p11850 Brassica napus HOM05D010083 ORTHO05D009427 8.8e-06 54.3 144 34.7
C09p44910 Brassica napus HOM05D010083 ORTHO05D009427 8.8e-06 54.3 144 34.7
BraA10t43282Z Brassica rapa HOM05D010083 ORTHO05D009427 8.8e-06 54.3 144 34.7


User provided reference genes

Program Settings