Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 5.6e-164 580.9 294 100.0
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 2.5e-159 565.5 294 95.9
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 1.5e-153 546.2 294 93.9
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 3.9e-149 531.6 290 92.1
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 3.7e-147 525.0 294 88.4
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 5.3e-146 521.2 295 90.5
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 2.6e-145 518.8 293 88.7
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 5.9e-145 517.7 294 87.4
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 1.9e-143 512.7 303 85.1
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 1.9e-143 512.7 296 86.5
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 2.5e-143 512.3 290 87.2
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 2.5e-143 512.3 299 84.9
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 4.2e-143 511.5 290 86.9
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 4.2e-143 511.5 294 86.1
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 5.5e-143 511.1 294 85.4
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 5.5e-143 511.1 296 86.5
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 5.5e-143 511.1 294 85.7
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 7.2e-143 510.8 294 86.4
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 9.4e-143 510.4 290 86.9
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 2.1e-142 509.2 285 87.4
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 2.1e-142 509.2 285 87.4
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 2.1e-142 509.2 285 87.4
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 3.6e-142 508.4 285 87.4
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 1.0e-141 506.9 296 85.5
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 1.8e-141 506.1 292 86.3
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 1.8e-141 506.1 285 86.7
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 1.8e-141 506.1 301 84.7
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 2.3e-141 505.8 298 85.6
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 2.3e-141 505.8 297 85.2
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 2.3e-141 505.8 295 85.4
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 3.0e-141 505.4 296 87.2
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 3.9e-141 505.0 288 85.8
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 3.9e-141 505.0 300 84.7
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 3.9e-141 505.0 297 85.2
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 5.1e-141 504.6 303 83.8
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 5.1e-141 504.6 302 84.1
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 5.1e-141 504.6 299 84.3
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 8.8e-141 503.8 306 83.7
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 8.8e-141 503.8 307 82.7
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 1.5e-140 503.1 288 86.1
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 1.5e-140 503.1 290 87.2
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 2.0e-140 502.7 307 82.7
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 2.5e-140 502.3 296 85.1
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 2.5e-140 502.3 284 86.6
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 2.5e-140 502.3 298 85.2
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 2.5e-140 502.3 295 85.1
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 7.4e-140 500.7 283 86.6
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 9.7e-140 500.4 292 87.0
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 1.3e-139 500.0 298 82.9
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 3.7e-139 498.4 296 84.1
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 3.7e-139 498.4 298 84.9
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 4.8e-139 498.0 294 83.3
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 4.8e-139 498.0 280 86.1
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 6.3e-139 497.7 302 82.1
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 6.3e-139 497.7 296 84.8
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 6.3e-139 497.7 300 83.3
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 8.2e-139 497.3 294 84.4
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 8.2e-139 497.3 298 83.9
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 1.1e-138 496.9 288 87.2
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 1.4e-138 496.5 270 90.4
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 1.8e-138 496.1 295 83.7
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 1.8e-138 496.1 279 86.7
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 2.4e-138 495.7 279 86.0
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 2.4e-138 495.7 297 84.2
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 3.1e-138 495.4 294 83.3
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 3.1e-138 495.4 283 85.9
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 3.1e-138 495.4 296 83.8
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 4.1e-138 495.0 298 82.9
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 5.3e-138 494.6 298 82.6
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 9.1e-138 493.8 294 83.0
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.5e-137 493.0 283 86.6
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 1.5e-137 493.0 280 85.0
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 2.0e-137 492.7 277 86.3
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 2.6e-137 492.3 302 82.1
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 3.4e-137 491.9 294 82.3
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 4.5e-137 491.5 283 86.2
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 7.7e-137 490.7 281 85.1
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 1.3e-136 490.0 294 82.3
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 1.3e-136 490.0 306 81.7
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 1.7e-136 489.6 300 82.3
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 5.0e-136 488.0 292 83.9
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 8.5e-136 487.3 299 82.9
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 4.2e-135 485.0 294 82.7
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 7.2e-135 484.2 294 82.0
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 9.4e-135 483.8 296 82.1
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 1.6e-134 483.0 294 82.3
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 2.7e-134 482.3 301 81.1
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 2.7e-134 482.3 281 84.7
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 3.6e-134 481.9 282 86.2
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 7.9e-134 480.7 290 83.8
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 1.0e-133 480.3 295 81.7
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 3.0e-133 478.8 282 83.7
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.5e-132 476.5 288 82.3
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 2.0e-132 476.1 293 81.6
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 4.4e-132 474.9 295 79.3
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.7e-131 473.0 298 80.5
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 2.2e-131 472.6 299 80.6
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 4.8e-131 471.5 297 81.5
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 1.8e-130 469.5 265 86.8
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 1.8e-130 469.5 302 79.5
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 3.1e-130 468.8 311 78.1
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 1.2e-129 466.8 281 82.6
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 1.2e-129 466.8 287 81.2
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 1.2e-129 466.8 291 81.4
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 5.9e-129 464.5 294 79.3
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 1.7e-128 463.0 284 82.7
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 2.9e-128 462.2 282 83.3
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 1.1e-127 460.3 284 80.6
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 1.9e-127 459.5 300 78.3
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 2.5e-127 459.1 292 80.5
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 3.2e-127 458.8 288 79.9
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 1.2e-126 456.8 291 79.0
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 6.1e-126 454.5 310 75.5
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 1.8e-125 453.0 292 78.8
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 4.0e-125 451.8 263 85.9
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 9.7e-124 447.2 384 64.6
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 2.8e-123 445.7 326 72.4
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 2.8e-123 445.7 266 84.6
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 4.1e-122 441.8 300 74.0
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 1.6e-121 439.9 298 74.8
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.7e-120 436.4 270 82.2
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 8.5e-120 434.1 285 77.5
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 6.8e-117 424.5 251 83.7
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 2.0e-116 422.9 221 93.2
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 6.3e-115 417.9 261 80.5
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 1.4e-114 416.8 221 91.9
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 2.4e-114 416.0 282 76.6
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 4.2e-111 405.2 285 70.2
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 9.4e-111 404.1 218 89.0
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 9.4e-111 404.1 218 89.0
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 2.8e-107 392.5 250 75.2
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 1.2e-105 387.1 273 67.4
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 4.5e-105 385.2 251 74.1
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 1.6e-102 376.7 221 84.2
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 1.4e-101 373.6 200 90.0
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 5.2e-101 371.7 298 67.8
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 4.1e-98 362.1 301 60.8
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 1.3e-96 357.1 215 83.7
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 9.8e-92 340.9 182 91.8
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 3.7e-91 339.0 182 89.6
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 2.3e-88 329.7 208 79.8
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 8.3e-83 311.2 174 87.4
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 2.7e-81 306.2 221 74.7
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 7.8e-81 304.7 195 78.5
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 2.1e-73 280.0 152 90.1
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 4.9e-67 258.8 194 67.0
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.3e-62 244.2 146 81.5
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 9.0e-61 238.0 209 63.6
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 1.1e-50 204.5 244 50.0
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 2.3e-48 196.8 119 76.5
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 1.1e-45 188.0 158 63.9
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 4.0e-45 186.0 136 72.1
Lj8A156T78 Lonicera japonica HOM05D003815 ORTHO05D004580 1.9e-42 177.2 177 57.6
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 2.7e-41 173.3 105 78.1
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 2.1e-38 163.7 86 88.4
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 1.3e-35 154.5 96 76.0
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.3e-30 137.9 88 77.3
BolC6t36614H Brassica oleracea HOM05D003815 ORTHO05D004580 4.8e-30 136.0 93 77.4
Lj3g0015923 Lotus japonicus HOM05D003815 ORTHO05D004580 3.1e-29 133.3 196 44.9
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 2.0e-28 130.6 303 32.0
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 7.2e-26 122.1 170 43.5
BcaC08g43686 Brassica carinata HOM05D003815 ORTHO05D004580 2.7e-25 120.2 66 87.9
BolC6t36186H Brassica oleracea HOM05D003815 ORTHO05D004580 2.7e-25 120.2 66 87.9
PSO017G7235 Papaver somniferum HOM05D003815 ORTHO05D004580 2.7e-17 93.6 53 79.2
Ca_12192_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 4.7e-17 92.8 87 60.9
Ca_30580_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 4.7e-17 92.8 87 60.9
Sopen05g017440 Solanum pennellii HOM05D003815 ORTHO05D004580 1.1e-15 88.2 158 39.2
Sopen05g018740 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-14 84.7 85 54.1
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 2.8e-14 83.6 79 53.2
BolC9t59438H Brassica oleracea HOM05D003815 ORTHO05D004580 2.0e-12 77.4 92 47.8
ATR0730G237 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.0e-11 75.1 69 60.9
C09p66180 Brassica napus HOM05D003815 ORTHO05D004580 1.9e-10 70.9 103 40.8
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 1.9e-10 70.9 68 57.4
Lj8C156T6 Lonicera japonica HOM05D003815 ORTHO05D004580 1.9e-10 70.9 76 57.9
Solyc04g079020.4 Solanum lycopersicum HOM05D003815 ORTHO05D004580 4.2e-10 69.7 110 40.0
COL.COLO4_31682 Corchorus olitorius HOM05D000007 ORTHO05D000017 8.0e-09 65.5 43 76.7
Oeu026881.1 Olea europaea HOM05D001611 ORTHO05D001464 4.0e-08 63.2 57 49.1
Actinidia16545 Actinidia chinensis HOM05D003815 ORTHO05D056144 1.5e-07 61.2 53 62.3
Actinidia24031 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.5e-07 61.2 34 82.4
Lj2g0024488 Lotus japonicus HOM05D003815 ORTHO05D004580 7.5e-07 58.9 38 76.3
Solyc04g079010.1 Solanum lycopersicum HOM05D003815 ORTHO05D004580 8.2e-06 55.5 31 71.0


User provided reference genes

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