Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 3.4e-178 628.2 323 100.0
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 3.9e-134 481.9 270 91.9
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 1.3e-126 456.8 324 72.5
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 3.9e-126 455.3 319 73.7
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 2.8e-124 449.1 324 73.1
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 1.4e-123 446.8 322 73.9
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 3.1e-123 445.7 319 71.5
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 2.0e-122 443.0 319 70.5
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 1.9e-120 436.4 327 70.9
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 7.2e-120 434.5 325 70.8
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 2.1e-119 433.0 327 72.8
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 3.6e-119 432.2 322 70.5
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 3.6e-119 432.2 328 70.4
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 4.6e-119 431.8 327 70.6
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 1.0e-118 430.6 321 72.0
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 1.8e-118 429.9 325 69.2
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 6.7e-118 427.9 316 70.9
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 1.1e-117 427.2 331 69.5
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 1.5e-117 426.8 325 70.2
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 2.0e-117 426.4 322 68.0
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 2.6e-117 426.0 325 68.9
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 5.7e-117 424.9 325 68.9
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 1.3e-116 423.7 331 68.6
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 1.7e-116 423.3 324 69.1
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 2.2e-116 422.9 319 70.8
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 4.8e-116 421.8 319 69.0
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 4.8e-116 421.8 331 68.3
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 1.4e-115 420.2 331 68.0
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 1.4e-115 420.2 323 68.7
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 2.4e-115 419.5 325 68.9
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 3.1e-115 419.1 296 72.3
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 3.1e-115 419.1 324 68.5
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 4.1e-115 418.7 329 69.0
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.6e-114 416.0 294 73.5
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 2.6e-114 416.0 323 68.4
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 2.6e-114 416.0 324 67.0
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 3.4e-114 415.6 280 75.4
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 5.9e-114 414.8 324 68.2
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 1.7e-113 413.3 303 68.6
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 2.2e-113 412.9 311 69.1
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 1.1e-112 410.6 254 80.7
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.4e-112 410.2 294 72.8
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 1.9e-112 409.8 326 65.6
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 3.2e-112 409.1 324 67.0
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 3.2e-112 409.1 326 66.3
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 4.2e-112 408.7 324 67.9
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 5.5e-112 408.3 254 80.3
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 7.2e-112 407.9 330 66.7
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 1.2e-111 407.1 330 66.7
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 1.2e-111 407.1 313 70.3
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 3.6e-111 405.6 330 65.5
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 4.7e-111 405.2 327 65.7
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 4.7e-111 405.2 329 66.9
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 1.4e-110 403.7 324 67.0
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 1.4e-110 403.7 325 66.2
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 2.3e-110 402.9 344 62.8
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 2.3e-110 402.9 320 69.4
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 3.9e-110 402.1 325 66.2
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 5.2e-110 401.7 329 65.3
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 5.2e-110 401.7 324 65.7
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 6.7e-110 401.4 328 63.1
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 1.5e-109 400.2 324 65.1
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 2.0e-109 399.8 323 64.7
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 3.3e-109 399.1 316 66.1
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 5.7e-109 398.3 324 64.8
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 1.3e-108 397.1 313 66.1
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 3.7e-108 395.6 335 65.1
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 4.8e-108 395.2 237 84.0
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 1.1e-107 394.0 293 68.9
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 7.0e-107 391.3 285 70.2
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 3.5e-106 389.0 271 71.2
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 2.9e-105 386.0 344 61.0
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 5.0e-105 385.2 304 67.4
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 7.2e-104 381.3 286 68.5
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 2.1e-103 379.8 328 64.9
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 8.0e-103 377.9 289 70.2
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 1.8e-102 376.7 305 65.6
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 3.0e-102 375.9 270 71.5
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 4.0e-102 375.6 279 70.6
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 6.7e-102 374.8 289 70.2
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 1.5e-101 373.6 303 65.7
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 3.7e-100 369.0 275 70.2
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 5.3e-99 365.2 257 71.6
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 2.0e-98 363.2 273 68.1
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.3e-97 360.5 236 74.6
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 6.5e-97 358.2 234 75.6
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 2.7e-95 352.8 322 58.4
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 1.4e-94 350.5 275 63.6
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 1.8e-94 350.1 237 74.3
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 4.4e-93 345.5 248 70.2
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 7.0e-91 338.2 210 80.0
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 7.0e-91 338.2 270 65.6
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 5.0e-89 332.0 303 61.1
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 5.0e-89 332.0 249 68.3
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 4.2e-88 328.9 209 76.6
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 1.6e-87 327.0 381 50.1
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 1.4e-86 323.9 228 69.3
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 3.4e-85 319.3 278 63.7
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 9.2e-75 284.6 279 53.8
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 8.0e-71 271.6 216 63.4
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 2.6e-69 266.5 243 57.6
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 8.3e-68 261.5 279 48.7
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 6.0e-66 255.4 248 56.0
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 3.0e-65 253.1 276 48.9
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 4.6e-58 229.2 275 48.0
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 6.2e-55 218.8 148 71.6
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 4.3e-48 196.1 284 41.9
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.8e-47 193.4 129 74.4
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 1.3e-39 167.9 110 76.4
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 6.0e-34 149.1 88 86.4
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 1.8e-33 147.5 88 86.4
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 9.0e-30 135.2 81 85.2
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 7.6e-21 105.5 72 73.6
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 1.5e-16 91.3 261 30.7
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 7.4e-16 89.0 65 66.2
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.8e-15 87.0 64 67.2
BcaC05g28656 Brassica carinata HOM05D022203 ORTHO05D024331 1.1e-08 65.1 36 83.3
MD11G1248800 Malus domestica HOM05D002373 ORTHO05D008661 3.3e-08 63.5 157 38.2
Atru.chr2.2601 Acer truncatum HOM05D002373 ORTHO05D013107 1.7e-07 61.2 35 80.0


User provided reference genes

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