Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G118066 Populus trichocarpa HOM05D002958 ORTHO05D003558 1.7e-111 406.0 203 100.0
Potri.001G399000 Populus trichocarpa HOM05D002958 ORTHO05D003558 4.9e-98 361.3 198 92.4
Sabra16G0261600 Salix brachista HOM05D002958 ORTHO05D003558 8.6e-95 350.5 215 85.1
Manes.15G087800 Manihot esculenta HOM05D002958 ORTHO05D003558 1.8e-89 332.8 196 85.7
Manes.03G109300 Manihot esculenta HOM05D002958 ORTHO05D003558 1.2e-88 330.1 197 85.3
TWI39G0621 Tripterygium wilfordii HOM05D002958 ORTHO05D003558 1.3e-87 326.6 196 83.2
Ciclev10007808m.g Citrus clementina HOM05D002958 ORTHO05D003558 2.3e-84 315.8 189 81.0
TWI14G0888 Tripterygium wilfordii HOM05D002958 ORTHO05D003558 6.8e-84 314.3 196 79.1
Duzib213G1007 Durio zibethinus HOM05D002958 ORTHO05D003558 3.4e-83 312.0 191 79.6
Cfa020573 Carpinus fangiana HOM05D002958 ORTHO05D003558 4.4e-83 311.6 195 81.0
Thecc.07G091600 Theobroma cacao HOM05D002958 ORTHO05D003558 4.4e-83 311.6 195 77.9
Atru.chr2.2483 Acer truncatum HOM05D002958 ORTHO05D003558 1.3e-82 310.1 196 76.5
Cpa.g.sc80.76 Carica papaya HOM05D002958 ORTHO05D003558 2.2e-82 309.3 197 77.2
CiPaw.11G170500 Carya illinoinensis HOM05D002958 ORTHO05D003558 2.9e-82 308.9 195 80.0
arahy.Tifrunner.gnm1.ann1.VQ4NRX Arachis hypogaea HOM05D002958 ORTHO05D003558 4.9e-82 308.1 197 78.7
CiPaw.12G119100 Carya illinoinensis HOM05D002958 ORTHO05D003558 1.1e-81 307.0 195 79.5
COL.COLO4_27183 Corchorus olitorius HOM05D002958 ORTHO05D003558 1.4e-81 306.6 195 75.4
MD03G1229100 Malus domestica HOM05D002958 ORTHO05D003558 1.4e-81 306.6 177 81.4
arahy.Tifrunner.gnm1.ann1.CK6KU2 Arachis hypogaea HOM05D002958 ORTHO05D003558 1.9e-81 306.2 197 78.2
Duzib170G0760 Durio zibethinus HOM05D002958 ORTHO05D003558 3.2e-81 305.4 177 80.8
PGR083G2586 Punica granatum HOM05D002958 ORTHO05D003558 4.1e-81 305.1 199 77.4
QL08p022191 Quercus lobata HOM05D002958 ORTHO05D003558 5.4e-81 304.7 195 79.5
Haze_09438 Corylus avellana HOM05D002958 ORTHO05D003558 2.7e-80 302.4 204 77.0
Lj3g0001420 Lotus japonicus HOM05D002958 ORTHO05D003558 2.7e-80 302.4 191 77.0
MBI07_g30198_MAGBIO Magnolia biondii HOM05D002958 ORTHO05D003558 6.0e-80 301.2 184 77.7
Gohir.D01G049400 Gossypium hirsutum HOM05D002958 ORTHO05D003558 7.8e-80 300.8 177 80.8
Gorai.002G069300 Gossypium raimondii HOM05D002958 ORTHO05D003558 7.8e-80 300.8 177 80.8
FAN21G2785 Fragaria x ananassa HOM05D002958 ORTHO05D003558 3.0e-79 298.9 191 77.0
FvH4_3g19790 Fragaria vesca HOM05D002958 ORTHO05D003558 3.9e-79 298.5 194 75.3
Glyma.06G240100 Glycine max HOM05D002958 ORTHO05D003558 5.0e-79 298.1 182 79.1
RcHm_v2.0_Chr5g0033201 Rosa chinensis HOM05D002958 ORTHO05D003558 5.0e-79 298.1 191 76.4
Gohir.A01G063000 Gossypium hirsutum HOM05D002958 ORTHO05D003558 1.1e-78 297.0 177 80.2
VMungo1080G0249 Vigna mungo HOM05D002958 ORTHO05D003558 1.1e-78 297.0 185 77.3
Lalb_Chr01g0016791 Lupinus albus HOM05D002958 ORTHO05D003558 1.9e-78 296.2 177 78.5
Cc05_g11940 Coffea canephora HOM05D002958 ORTHO05D003558 2.5e-78 295.8 201 73.1
CSS0042025 Camellia sinensis var. sinensis HOM05D002958 ORTHO05D003558 3.3e-78 295.4 196 74.5
CSS0016776 Camellia sinensis var. sinensis HOM05D002958 ORTHO05D003558 4.3e-78 295.0 190 75.8
Nn8g39708 Nelumbo nucifera HOM05D002958 ORTHO05D003558 4.3e-78 295.0 183 76.0
Medtr2g079110 Medicago truncatula HOM05D002958 ORTHO05D003558 5.6e-78 294.7 185 75.1
Oeu024907.2 Olea europaea HOM05D002958 ORTHO05D003558 5.6e-78 294.7 200 72.0
Dinv20183 Davidia involucrata HOM05D002958 ORTHO05D003558 9.5e-78 293.9 197 73.6
SGA_v2.0_scaffold73G24254 Striga asiatica HOM05D002958 ORTHO05D003558 9.5e-78 293.9 196 75.0
Glyma.12G225300 Glycine max HOM05D002958 ORTHO05D003558 1.2e-77 293.5 185 75.7
GSVIVG01014315001 Vitis vinifera HOM05D002958 ORTHO05D003558 1.2e-77 293.5 177 79.1
Phvul.005G072900 Phaseolus vulgaris HOM05D002958 ORTHO05D003558 1.6e-77 293.1 185 76.2
Rhsim04G0021800 Rhododendron simsii HOM05D002958 ORTHO05D003558 2.8e-77 292.4 183 75.4
Oeu051071.1 Olea europaea HOM05D002958 ORTHO05D003558 3.6e-77 292.0 200 72.5
TAR627G0778 Trochodendron aralioides HOM05D002958 ORTHO05D003558 3.6e-77 292.0 191 75.9
TAR627G0954 Trochodendron aralioides HOM05D002958 ORTHO05D003558 3.6e-77 292.0 191 75.9
Nitab4.5_0002383g0020 Nicotiana tabacum HOM05D002958 ORTHO05D003558 4.7e-77 291.6 200 72.0
Carub.0008s1414 Capsella rubella HOM05D002958 ORTHO05D003558 6.2e-77 291.2 191 73.8
AUR62019437 Chenopodium quinoa HOM05D002958 ORTHO05D003558 6.2e-77 291.2 196 71.9
Actinidia18769 Actinidia chinensis HOM05D002958 ORTHO05D003558 1.4e-76 290.0 199 71.4
Aa31LG3G10080 Aethionema arabicum HOM05D002958 ORTHO05D003558 1.8e-76 289.7 187 74.9
Glyma.13G276000 Glycine max HOM05D002958 ORTHO05D003558 2.3e-76 289.3 185 74.6
unitig_578.g15672 Utricularia gibba HOM05D002958 ORTHO05D003558 2.3e-76 289.3 180 75.0
Ah.04g164780 Amaranthus hybridus HOM05D002958 ORTHO05D003558 3.1e-76 288.9 196 70.4
MD11G1249900 Malus domestica HOM05D002958 ORTHO05D003558 3.1e-76 288.9 211 69.7
AT5G53850 Arabidopsis thaliana HOM05D002958 ORTHO05D003558 4.0e-76 288.5 184 75.0
BcaB08g35744 Brassica carinata HOM05D002958 ORTHO05D003558 4.0e-76 288.5 188 74.5
Sp6g15910 Schrenkiella parvula HOM05D002958 ORTHO05D003558 4.0e-76 288.5 176 76.7
CAN.G162.50 Capsicum annuum HOM05D002958 ORTHO05D003558 5.2e-76 288.1 201 73.1
ATR0737G076 Amborella trichopoda HOM05D002958 ORTHO05D003558 6.8e-76 287.7 194 71.1
DCAR_020992 Daucus carota HOM05D002958 ORTHO05D003558 6.8e-76 287.7 177 78.0
SalBow7G2893 Salvia bowleyana HOM05D002958 ORTHO05D003558 6.8e-76 287.7 194 72.2
Hma1.2p1_0458F.1_g157030 Hydrangea macrophylla HOM05D002958 ORTHO05D003558 1.2e-75 287.0 197 75.1
Lsat_1_v5_gn_7_104120 Lactuca sativa HOM05D002958 ORTHO05D003558 1.2e-75 287.0 179 77.1
BcaC04g20412 Brassica carinata HOM05D002958 ORTHO05D003558 1.5e-75 286.6 188 73.4
A02p10810 Brassica napus HOM05D002958 ORTHO05D003558 1.5e-75 286.6 190 72.1
C02p17920 Brassica napus HOM05D002958 ORTHO05D003558 1.5e-75 286.6 179 74.3
FAN11G0087 Fragaria x ananassa HOM05D002958 ORTHO05D003558 1.5e-75 286.6 214 68.2
FAN16G0300 Fragaria x ananassa HOM05D002958 ORTHO05D003558 1.5e-75 286.6 214 68.2
BcaB05g22079 Brassica carinata HOM05D002958 ORTHO05D003558 2.0e-75 286.2 191 73.3
FAN25G2067 Fragaria x ananassa HOM05D002958 ORTHO05D003558 2.0e-75 286.2 214 67.8
BcaC03g14381 Brassica carinata HOM05D002958 ORTHO05D003558 2.6e-75 285.8 179 74.9
Sed0013988 Sechium edule HOM05D002958 ORTHO05D003558 2.6e-75 285.8 195 72.3
PSO541G2422 Papaver somniferum HOM05D002958 ORTHO05D003558 4.4e-75 285.0 188 70.2
CDE02G0813 Ceratophyllum demersum HOM05D002958 ORTHO05D003558 7.5e-75 284.3 188 71.8
PGSC0003DMG400012412 Solanum tuberosum HOM05D002958 ORTHO05D003558 7.5e-75 284.3 200 70.5
MSTRG.15237 Avicennia marina HOM05D002958 ORTHO05D003558 9.8e-75 283.9 197 72.1
CANSAT56G4387 Cannabis sativa HOM05D002958 ORTHO05D003558 1.7e-74 283.1 210 68.1
THA.LOC104799927 Tarenaya hassleriana HOM05D002958 ORTHO05D003558 1.7e-74 283.1 203 69.5
MELO3C016693.2 Cucumis melo HOM05D002958 ORTHO05D003558 2.2e-74 282.7 193 71.5
Thhalv10013244m.g Eutrema salsugineum HOM05D002958 ORTHO05D003558 3.7e-74 282.0 195 70.3
Nitab4.5_0000207g0070 Nicotiana tabacum HOM05D002958 ORTHO05D003558 3.7e-74 282.0 200 70.5
PSO675G8275 Papaver somniferum HOM05D002958 ORTHO05D003558 3.7e-74 282.0 193 68.4
CsaV3_4G033640 Cucumis sativus L. HOM05D002958 ORTHO05D003558 4.9e-74 281.6 193 71.0
Sopen07g031230 Solanum pennellii HOM05D002958 ORTHO05D003558 4.9e-74 281.6 193 71.0
Eucgr.F03307 Eucalyptus grandis HOM05D002958 ORTHO05D003558 6.4e-74 281.2 197 69.5
Solyc07g063040.3 Solanum lycopersicum HOM05D002958 ORTHO05D003558 1.1e-73 280.4 193 70.5
CARHR266980 Cardamine hirsuta HOM05D002958 ORTHO05D003558 1.4e-73 280.0 192 70.8
HanXRQChr09g0270181 Helianthus annuus HOM05D002958 ORTHO05D003558 1.4e-73 280.0 179 76.0
C09p43840 Brassica napus HOM05D002958 ORTHO05D003558 4.1e-73 278.5 200 69.0
Migut.M00798 Erythranthe guttata HOM05D002958 ORTHO05D003558 4.1e-73 278.5 200 69.0
AL8G28910 Arabidopsis lyrata HOM05D002958 ORTHO05D003558 5.4e-73 278.1 200 69.0
Aqoxy4G00736 Aquilegia oxysepala HOM05D002958 ORTHO05D003558 9.2e-73 277.3 182 71.4
Hma1.2p1_0002F.1_g002040 Hydrangea macrophylla HOM05D002958 ORTHO05D003558 9.2e-73 277.3 181 71.8
Nitab4.5_0001336g0100 Nicotiana tabacum HOM05D002958 ORTHO05D003558 9.2e-73 277.3 193 71.5
BraA02t06142Z Brassica rapa HOM05D002958 ORTHO05D003558 1.2e-72 276.9 196 69.4
CSS0011837 Camellia sinensis var. sinensis HOM05D002958 ORTHO05D003558 1.2e-72 276.9 188 71.3
Nitab4.5_0001241g0080 Nicotiana tabacum HOM05D002958 ORTHO05D003558 1.6e-72 276.6 180 73.9
BolC9t57268H Brassica oleracea HOM05D002958 ORTHO05D003558 2.1e-72 276.2 204 67.6
Dinv13400 Davidia involucrata HOM05D002958 ORTHO05D003558 2.1e-72 276.2 200 68.0
BraA10t43217Z Brassica rapa HOM05D002958 ORTHO05D003558 2.7e-72 275.8 204 67.6
A10p11240 Brassica napus HOM05D002958 ORTHO05D003558 3.5e-72 275.4 204 67.6
ECA236G4656 Erigeron canadensis HOM05D002958 ORTHO05D003558 6.0e-72 274.6 182 72.0
vmacro09527 Vaccinium macrocarpon HOM05D002958 ORTHO05D003558 6.0e-72 274.6 198 69.2
BolC2t07923H Brassica oleracea HOM05D002958 ORTHO05D003558 1.0e-71 273.9 195 68.2
Mapoly0003s0138 Marchantia polymorpha HOM05D002958 ORTHO05D003558 1.0e-71 273.9 179 72.1
AUR62039195 Chenopodium quinoa HOM05D002958 ORTHO05D003558 1.1e-70 270.4 212 63.7
Lj8C110T8 Lonicera japonica HOM05D002958 ORTHO05D003558 1.5e-70 270.0 197 66.5
Manes.13G144832 Manihot esculenta HOM05D002958 ORTHO05D003558 2.5e-70 269.2 180 70.0
GSVIVG01020566001 Vitis vinifera HOM05D002958 ORTHO05D003558 3.3e-70 268.9 191 65.4
MSTRG.6831 Avicennia marina HOM05D002958 ORTHO05D003558 1.1e-68 263.8 200 66.0
Thecc.02G181900 Theobroma cacao HOM05D002958 ORTHO05D003558 2.0e-67 259.6 180 66.7
Actinidia13022 Actinidia chinensis HOM05D002958 ORTHO05D003558 5.8e-67 258.1 196 64.8
DCAR_013024 Daucus carota HOM05D002958 ORTHO05D003558 5.8e-67 258.1 173 68.2
AagrBONN_evm.TU.Sc2ySwM_368.412 Anthoceros agrestis HOM05D002958 ORTHO05D003558 9.9e-67 257.3 176 69.3
SHI21536 Sapria himalayana HOM05D002958 ORTHO05D003558 2.9e-66 255.8 192 65.6
Os11g0484000 Oryza sativa ssp. japonica HOM05D002958 ORTHO05D003558 8.4e-66 254.2 188 64.4
ClCG11G018020 Citrullus lanatus HOM05D002958 ORTHO05D003558 5.4e-65 251.5 203 62.1
SMO356G0618 Selaginella moellendorffii HOM05D002958 ORTHO05D003558 1.0e-63 247.3 172 66.3
Ca_03507_v3 Cicer arietinum L. HOM05D002958 ORTHO05D003558 5.1e-63 245.0 185 64.3
Pp3c3_4430 Physcomitrium patens HOM05D002958 ORTHO05D003558 2.8e-61 239.2 173 65.3
Lj8C155G9 Lonicera japonica HOM05D002958 ORTHO05D003558 4.7e-61 238.4 195 65.6
Sabra11G0103100 Salix brachista HOM05D002958 ORTHO05D003558 6.2e-61 238.0 145 84.8
Zm00001eb169620 Zea mays HOM05D002958 ORTHO05D003558 2.4e-60 236.1 169 63.3
EL10Ac4g08198 Beta vulgaris HOM05D002958 ORTHO05D003558 4.0e-60 235.3 197 61.4
Hma1.2p1_2752F.1_g327880 Hydrangea macrophylla HOM05D002958 ORTHO05D003558 8.9e-60 234.2 195 65.6
Cc05_g07360 Coffea canephora HOM05D002958 ORTHO05D003558 4.4e-59 231.9 197 56.3
Peaxi162Scf00069g01630 Petunia axillaris HOM05D002958 ORTHO05D003558 9.9e-59 230.7 188 62.2
Cc05_g07390 Coffea canephora HOM05D002958 ORTHO05D003558 1.7e-58 229.9 200 55.0
Cc03_g12040 Coffea canephora HOM05D002958 ORTHO05D003558 8.7e-55 217.6 169 59.8
Gohir.D13G152056 Gossypium hirsutum HOM05D002958 ORTHO05D003558 8.7e-55 217.6 152 68.4
TPR.G7973 Trifolium pratense HOM05D002958 ORTHO05D003558 1.6e-48 196.8 113 80.5
MBI06_g23079_MAGBIO Magnolia biondii HOM05D002958 ORTHO05D003558 6.0e-48 194.9 138 65.9
Gohir.A02G098700 Gossypium hirsutum HOM05D002958 ORTHO05D003558 8.7e-47 191.0 113 77.9
Sc16g0007030 Simmondsia chinensis HOM05D002958 ORTHO05D003558 1.5e-46 190.3 118 74.6
Cre01.g016528 Chlamydomonas reinhardtii HOM05D002958 ORTHO05D003558 7.3e-46 188.0 172 51.2
Cfa014633 Carpinus fangiana HOM05D002958 ORTHO05D003558 6.4e-42 174.9 121 67.8
Actinidia11088 Actinidia chinensis HOM05D002958 ORTHO05D003558 3.2e-41 172.6 110 75.5
MBI06_g20686_MAGBIO Magnolia biondii HOM05D002958 ORTHO05D003558 4.2e-41 172.2 158 56.3
TAR624G0404 Trochodendron aralioides HOM05D002958 ORTHO05D003558 3.7e-37 159.1 106 69.8
MELO3C019407.2 Cucumis melo HOM05D002958 ORTHO05D003558 5.8e-35 151.8 129 61.2
SalBow4G1525 Salvia bowleyana HOM05D002958 ORTHO05D003558 1.0e-34 151.0 120 61.7
CSS0039562 Camellia sinensis var. sinensis HOM05D002958 ORTHO05D003558 1.6e-32 143.7 125 60.8
CSS0047160 Camellia sinensis var. sinensis HOM05D002958 ORTHO05D003558 1.6e-32 143.7 125 60.8
CsaV3_3G019470 Cucumis sativus L. HOM05D002958 ORTHO05D003558 6.0e-32 141.7 129 58.9
Prupe.4G180000 Prunus persica HOM05D002958 ORTHO05D003558 2.5e-30 136.3 81 80.2
SEGI_29603 Sequoiadendron giganteum HOM05D002958 ORTHO05D003558 6.9e-28 128.3 78 76.9
ClCG05G009310 Citrullus lanatus HOM05D002958 ORTHO05D003558 1.7e-26 123.6 148 51.4
QL08p039572 Quercus lobata HOM05D002958 ORTHO05D003558 1.7e-26 123.6 102 56.9
QL08p039561 Quercus lobata HOM05D002958 ORTHO05D003558 3.8e-26 122.5 80 71.2
SEGI_08533 Sequoiadendron giganteum HOM05D002958 ORTHO05D003558 1.1e-25 120.9 73 78.1
Gorai.013G170700 Gossypium raimondii HOM05D002958 ORTHO05D003558 1.9e-25 120.2 108 57.4
Gohir.D13G151100 Gossypium hirsutum HOM05D002958 ORTHO05D003558 2.1e-24 116.7 108 55.6
HanXRQChr01g0015321 Helianthus annuus HOM05D002958 ORTHO05D029259 6.1e-24 115.2 154 47.4
HanXRQChr05g0153011 Helianthus annuus HOM05D002958 ORTHO05D029259 6.1e-24 115.2 154 47.4
Cpa.g.sc83.52 Carica papaya HOM05D002958 ORTHO05D003558 1.3e-23 114.0 177 40.7
Ciclev10009308m.g Citrus clementina HOM05D002958 ORTHO05D003558 1.1e-22 110.9 112 53.6
Actinidia09690 Actinidia chinensis HOM05D002958 ORTHO05D003558 2.2e-21 106.7 107 54.2
CBR_g20444 Chara braunii HOM05D002958 ORTHO05D003558 1.4e-20 104.0 111 49.5
Cfa022318 Carpinus fangiana HOM05D002958 ORTHO05D003558 6.9e-20 101.7 181 36.5
Gorai.013G169100 Gossypium raimondii HOM05D002958 ORTHO05D003558 3.4e-19 99.4 83 60.2
Gohir.A13G147033 Gossypium hirsutum HOM05D002958 ORTHO05D003558 5.9e-19 98.6 78 64.1
Eucgr.F01149 Eucalyptus grandis HOM05D002958 ORTHO05D003558 6.5e-18 95.1 152 37.5
Haze_13197 Corylus avellana HOM05D002958 ORTHO05D003558 1.4e-17 94.0 108 48.1
Lalb_Chr20g0109601 Lupinus albus HOM05D002958 ORTHO05D003558 7.2e-17 91.7 51 84.3
Lalb_Chr20g0109591 Lupinus albus HOM05D002958 ORTHO05D029259 9.4e-17 91.3 72 62.5
Psat5g242200 Pisum sativum HOM05D002958 ORTHO05D003558 1.2e-16 90.9 51 80.4
Duzib187G0289 Durio zibethinus HOM05D002958 ORTHO05D029259 1.4e-15 87.4 76 60.5
TAR624G0879 Trochodendron aralioides HOM05D002958 ORTHO05D003558 2.4e-12 76.6 41 85.4
Rhsim06G0199700 Rhododendron simsii HOM05D002958 ORTHO05D003558 9.1e-12 74.7 106 41.5
PGSC0003DMG400025041 Solanum tuberosum HOM05D002958 ORTHO05D003558 1.2e-11 74.3 72 56.9
Dinv14925 Davidia involucrata HOM05D002958 ORTHO05D003558 3.4e-11 72.8 38 89.5
vmacro11871 Vaccinium macrocarpon HOM05D002958 ORTHO05D003558 2.2e-10 70.1 125 37.6
Glyma.12G153200 Glycine max HOM05D002958 ORTHO05D003558 3.8e-10 69.3 38 84.2
COL.COLO4_36342 Corchorus olitorius HOM05D002958 ORTHO05D003558 6.5e-10 68.6 41 75.6
VMungo0647G0173 Vigna mungo HOM05D002958 ORTHO05D003558 1.9e-09 67.0 37 83.8
Actinidia35245 Actinidia chinensis HOM05D002958 ORTHO05D003558 3.2e-09 66.2 59 59.3
ECA240G3077 Erigeron canadensis HOM05D002958 ORTHO05D003558 1.2e-08 64.3 72 52.8
EL10Ac4g08457 Beta vulgaris HOM05D000198 ORTHO05D006356 1.6e-08 63.9 44 61.4
Gohir.A13G146200 Gossypium hirsutum HOM05D002958 ORTHO05D003558 3.6e-08 62.8 51 56.9
Peaxi162Scf00027g00211 Petunia axillaris HOM05D002958 ORTHO05D003558 1.8e-07 60.5 60 56.7
Lsat_1_v5_gn_9_97501 Lactuca sativa HOM05D002958 ORTHO05D003558 7.4e-06 55.1 60 46.7


User provided reference genes

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