Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.8e-248 862.1 422 100.0
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 2.3e-235 818.5 422 93.4
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 3.3e-218 761.5 422 83.6
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 4.4e-218 761.1 421 83.4
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 7.7e-215 750.4 540 71.3
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 1.0e-214 750.0 410 84.1
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 1.3e-214 749.6 422 82.5
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 2.2e-214 748.8 421 82.4
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 5.0e-214 747.7 421 81.5
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 4.2e-213 744.6 421 81.2
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 2.7e-212 741.9 421 81.0
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 8.0e-212 740.3 413 82.3
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 1.4e-211 739.6 416 82.2
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 3.0e-211 738.4 424 80.9
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 6.8e-211 737.3 421 79.8
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 2.0e-210 735.7 421 80.3
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 2.2e-209 732.3 423 80.1
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 6.3e-209 730.7 418 80.6
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 8.3e-209 730.3 427 78.9
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 1.4e-208 729.6 425 79.3
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.8e-208 729.2 412 82.5
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 7.0e-208 727.2 412 80.6
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 9.1e-208 726.9 426 79.8
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 1.2e-207 726.5 423 79.9
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 1.2e-207 726.5 409 81.7
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 2.3e-206 722.2 414 81.6
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 8.6e-206 720.3 412 81.1
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 8.6e-206 720.3 423 79.9
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 2.5e-205 718.8 413 79.7
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 5.5e-205 717.6 414 79.5
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 7.2e-205 717.2 414 79.2
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 6.1e-204 714.1 421 77.4
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 8.0e-204 713.8 412 80.3
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 1.8e-203 712.6 416 78.1
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 9.8e-202 706.8 416 77.4
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 9.8e-202 706.8 419 76.8
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 1.7e-201 706.1 422 76.3
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 2.8e-201 705.3 405 80.5
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 6.3e-201 704.1 422 76.3
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 6.3e-201 704.1 422 76.1
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 1.1e-200 703.4 423 76.8
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 1.4e-200 703.0 421 77.7
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 1.8e-200 702.6 419 77.6
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 7.0e-200 700.7 421 76.2
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 9.2e-200 700.3 422 76.1
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 2.7e-199 698.7 421 75.8
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 3.5e-199 698.4 415 77.3
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 5.9e-199 697.6 420 76.7
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 5.9e-199 697.6 419 78.5
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 7.8e-199 697.2 425 75.1
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 3.8e-198 694.9 421 75.8
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 5.0e-198 694.5 421 75.8
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 4.3e-197 691.4 421 75.5
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 5.6e-197 691.0 421 75.5
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 7.3e-197 690.6 421 75.5
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 1.6e-196 689.5 421 75.1
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 2.1e-196 689.1 421 74.6
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 6.1e-196 687.6 416 77.4
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 2.0e-194 682.6 422 75.4
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 4.4e-194 681.4 422 75.4
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 4.4e-194 681.4 421 75.1
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 5.7e-194 681.0 439 72.2
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 3.7e-193 678.3 422 74.4
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 8.3e-193 677.2 412 77.9
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 1.1e-192 676.8 412 74.0
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 1.8e-192 676.0 414 72.9
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 2.4e-192 675.6 424 72.9
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 2.0e-191 672.5 425 74.4
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 5.9e-191 671.0 402 77.4
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 7.8e-191 670.6 422 72.3
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 1.7e-190 669.5 413 74.6
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 6.6e-190 667.5 421 74.3
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 8.6e-190 667.2 425 74.1
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 7.3e-189 664.1 424 71.0
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.2e-188 663.3 397 76.1
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 2.0e-186 656.0 422 70.9
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 2.2e-185 652.5 412 72.6
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 2.7e-183 645.6 422 68.5
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 3.5e-183 645.2 436 69.7
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 6.8e-179 630.9 411 73.0
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 2.0e-178 629.4 466 65.7
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 8.6e-174 614.0 458 65.5
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 1.9e-173 612.8 412 69.7
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 6.2e-172 607.8 385 70.6
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 1.1e-168 597.0 419 64.4
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 1.2e-162 577.0 393 69.5
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 2.7e-159 565.8 412 66.3
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 1.3e-158 563.5 364 74.2
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.6e-156 556.6 397 66.8
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 7.6e-154 547.7 387 65.9
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 6.0e-151 538.1 380 69.7
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 1.3e-148 530.4 312 78.2
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 1.4e-147 526.9 313 76.7
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 7.4e-141 504.6 421 60.8
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 6.3e-100 368.6 214 77.6
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 9.4e-96 354.8 346 46.2
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 1.8e-91 340.5 203 76.4
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 1.6e-90 337.4 200 77.0
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 3.7e-84 316.2 346 43.9
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 4.1e-83 312.8 347 41.5
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 4.3e-72 276.2 347 36.3
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 2.0e-61 240.7 280 41.4
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 2.0e-45 187.6 106 77.4
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 8.4e-44 182.2 85 100.0
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 4.6e-42 176.4 105 77.1
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 4.3e-40 169.9 108 74.1
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 4.3e-40 169.9 108 74.1
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 1.6e-39 167.9 105 74.3
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 6.7e-33 146.0 139 56.8
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.1e-14 85.5 49 75.5
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 6.9e-14 82.8 49 73.5
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.2e-13 82.0 50 70.0
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 5.5e-11 73.2 48 66.7
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 1.2e-10 72.0 68 50.0
Sabra11G0102900 Salix brachista HOM05D006845 ORTHO05D348942 1.2e-10 72.0 36 94.4
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 3.6e-10 70.5 45 73.3


User provided reference genes

Program Settings