Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G103401 Populus trichocarpa HOM05D007699 ORTHO05D009796 1.1e-46 189.5 90 100.0
Potri.011G103301 Populus trichocarpa HOM05D007699 ORTHO05D009796 4.9e-26 120.9 79 75.9
Phvul.001G084100 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.6e-16 89.4 42 97.6
Medtr3g084270 Medicago truncatula HOM05D007699 ORTHO05D009796 3.5e-16 88.2 50 86.0
TPR.G38695 Trifolium pratense HOM05D000020 ORTHO05D000543 4.6e-16 87.8 45 88.9
Hma1.2p1_0886F.1_g232660 Hydrangea macrophylla HOM05D007699 ORTHO05D009796 7.8e-16 87.0 47 80.9
Hma1.2p1_0886F.1_g232685 Hydrangea macrophylla HOM05D007699 ORTHO05D009796 7.8e-16 87.0 47 80.9
CARHR088640 Cardamine hirsuta HOM05D007699 ORTHO05D009796 1.7e-15 85.9 54 75.9
Phvul.008G062500 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.7e-15 85.9 40 95.0
Prupe.7G069600 Prunus persica HOM05D007699 ORTHO05D009796 2.3e-15 85.5 81 60.5
QL03p053410 Quercus lobata HOM05D007699 ORTHO05D009796 2.3e-15 85.5 44 86.4
TPR.G12299 Trifolium pratense HOM05D007699 ORTHO05D009796 3.0e-15 85.1 52 73.1
A05p18230 Brassica napus HOM05D007699 ORTHO05D009796 3.9e-15 84.7 44 88.6
Phvul.001G066700 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 5.1e-15 84.3 39 97.4
arahy.Tifrunner.gnm1.ann1.3J1SD9 Arachis hypogaea HOM05D007699 ORTHO05D009796 6.6e-15 84.0 59 67.8
C03p91420 Brassica napus HOM05D007699 ORTHO05D009796 8.7e-15 83.6 53 73.6
Medtr3g105890 Medicago truncatula HOM05D007699 ORTHO05D009796 8.7e-15 83.6 75 57.3
Prupe.7G080000 Prunus persica HOM05D007699 ORTHO05D009796 1.9e-14 82.4 50 80.0
FAN13G3199 Fragaria x ananassa HOM05D007699 ORTHO05D009796 2.5e-14 82.0 41 90.2
FAN18G1300 Fragaria x ananassa HOM05D005738 ORTHO05D007135 2.5e-14 82.0 42 88.1
FAN18G3749 Fragaria x ananassa HOM05D005738 ORTHO05D007135 2.5e-14 82.0 42 88.1
FvH4_3g13700 Fragaria vesca HOM05D007699 ORTHO05D009796 3.3e-14 81.6 38 94.7
Nitab4.5_0005352g0040 Nicotiana tabacum HOM05D007699 ORTHO05D009796 3.3e-14 81.6 40 90.0
FAN11G1327 Fragaria x ananassa HOM05D007699 ORTHO05D009796 4.3e-14 81.3 41 90.2
arahy.Tifrunner.gnm1.ann1.3C01L3 Arachis hypogaea HOM05D007699 ORTHO05D009796 5.6e-14 80.9 36 100.0
Migut.J00839 Erythranthe guttata HOM05D007699 ORTHO05D009796 5.6e-14 80.9 43 86.0
Mapoly0020s0143 Marchantia polymorpha HOM05D007699 ORTHO05D009796 5.6e-14 80.9 49 79.6
Mapoly0086s0020 Marchantia polymorpha HOM05D007699 ORTHO05D009796 5.6e-14 80.9 36 100.0
Gohir.D06G068332 Gossypium hirsutum HOM05D007699 ORTHO05D009796 7.3e-14 80.5 39 92.3
Sopen12g028800 Solanum pennellii HOM05D007699 ORTHO05D009796 7.3e-14 80.5 38 92.1
Carub.0003s1340 Capsella rubella HOM05D007699 ORTHO05D009796 9.6e-14 80.1 36 97.2
CARHR185520 Cardamine hirsuta HOM05D007699 ORTHO05D009796 9.6e-14 80.1 40 90.0
TPR.G32688 Trifolium pratense HOM05D007699 ORTHO05D009796 9.6e-14 80.1 38 94.7
FAN08G0324 Fragaria x ananassa HOM05D007699 ORTHO05D009796 1.2e-13 79.7 37 94.6
Manes.11G145650 Manihot esculenta HOM05D007699 ORTHO05D009796 1.2e-13 79.7 38 94.7
Phvul.001G066900 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.2e-13 79.7 35 100.0
FAN08G2016 Fragaria x ananassa HOM05D007699 ORTHO05D009796 1.6e-13 79.3 38 94.7
FAN11G3494 Fragaria x ananassa HOM05D007699 ORTHO05D009796 1.6e-13 79.3 41 87.8
Nn7g36904 Nelumbo nucifera HOM05D007699 ORTHO05D009796 1.6e-13 79.3 47 76.6
GSVIVG01037330001 Vitis vinifera HOM05D007699 ORTHO05D009796 1.6e-13 79.3 40 92.5
Pp3c15_10810 Physcomitrium patens HOM05D007699 ORTHO05D009796 8.1e-13 77.0 56 69.6
Pp3c15_10813 Physcomitrium patens HOM05D007699 ORTHO05D009796 8.1e-13 77.0 56 69.6
Pp3c15_10820 Physcomitrium patens HOM05D007699 ORTHO05D009796 8.1e-13 77.0 56 69.6
Potri.005G055667 Populus trichocarpa HOM05D007699 ORTHO05D009796 8.1e-13 77.0 37 94.6
Ciclev10018283m.g Citrus clementina HOM05D007699 ORTHO05D009796 1.1e-12 76.6 48 79.2
Pp3s677_20 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.1e-12 76.6 44 81.8
Solyc12g056290.2 Solanum lycopersicum HOM05D007699 ORTHO05D009796 1.1e-12 76.6 35 97.1
EL10Ac6g13349 Beta vulgaris HOM05D007699 ORTHO05D009796 1.4e-12 76.3 40 87.5
EL10Ac6g13683 Beta vulgaris HOM05D007699 ORTHO05D009796 3.1e-12 75.1 43 83.7
Ah.10g036850 Amaranthus hybridus HOM05D007699 ORTHO05D009796 4.0e-12 74.7 49 73.5
Gorai.010G079800 Gossypium raimondii HOM05D007699 ORTHO05D009796 4.0e-12 74.7 37 91.9
EL10Ac6g13624 Beta vulgaris HOM05D007699 ORTHO05D009796 5.3e-12 74.3 39 87.2
EL10Ac6g13685 Beta vulgaris HOM05D007699 ORTHO05D009796 9.0e-12 73.6 35 94.3
Pp3c1_6540 Physcomitrium patens HOM05D007699 ORTHO05D009796 9.0e-12 73.6 35 94.3
EL10Ac6g13623 Beta vulgaris HOM05D007699 ORTHO05D009796 1.5e-11 72.8 37 89.2
Phvul.001G090500 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.5e-11 72.8 45 82.2
Pp3c10_15080 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.5e-11 72.8 46 71.7
Pp3c10_15084 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.5e-11 72.8 46 71.7
Pp3s1006_30 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.5e-11 72.8 46 71.7
Pp3s638_22 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.5e-11 72.8 46 71.7
Pp3s677_10 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.5e-11 72.8 46 71.7
Pp3s677_11 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.5e-11 72.8 46 71.7
Medtr8g461450 Medicago truncatula HOM05D007699 ORTHO05D009796 2.0e-11 72.4 33 97.0
CSS0021910 Camellia sinensis var. sinensis HOM05D007699 ORTHO05D009796 2.6e-11 72.0 40 82.5
Glyma.19G099100 Glycine max HOM05D007699 ORTHO05D009796 2.6e-11 72.0 42 78.6
Medtr3g108610 Medicago truncatula HOM05D007699 ORTHO05D009796 2.6e-11 72.0 63 63.5
Potri.005G055534 Populus trichocarpa HOM05D007699 ORTHO05D009796 2.6e-11 72.0 34 94.1
Thecc.10G037500 Theobroma cacao HOM05D007699 ORTHO05D009796 2.6e-11 72.0 35 91.4
EL10Ac6g13684 Beta vulgaris HOM05D007699 ORTHO05D009796 3.4e-11 71.6 37 86.5
Gorai.011G262200 Gossypium raimondii HOM05D007699 ORTHO05D009796 5.8e-11 70.9 32 96.9
CSS0023756 Camellia sinensis var. sinensis HOM05D007699 ORTHO05D009796 9.9e-11 70.1 46 71.7
Pp3c21_2000 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.3e-10 69.7 59 62.7
Pp3c21_2022 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.3e-10 69.7 59 62.7
Pp3c24_6960 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.3e-10 69.7 35 88.6
Pp3c24_6961 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.3e-10 69.7 35 88.6
Gohir.A11G277350 Gossypium hirsutum HOM05D007699 ORTHO05D009796 1.7e-10 69.3 42 76.2
SHI29091 Sapria himalayana HOM05D007699 ORTHO05D009796 1.7e-10 69.3 33 93.9
Pp3c1_26810 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.2e-10 68.9 32 96.9
Pp3c1_26830 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.2e-10 68.9 32 96.9
Carub.0006s3371 Capsella rubella HOM05D007699 ORTHO05D009796 3.8e-10 68.2 31 96.8
FAN11G3758 Fragaria x ananassa HOM05D007699 ORTHO05D009796 4.9e-10 67.8 33 90.9
arahy.Tifrunner.gnm1.ann1.C3EWW9 Arachis hypogaea HOM05D007699 ORTHO05D009796 6.4e-10 67.4 32 93.8
FAN18G1871 Fragaria x ananassa HOM05D007699 ORTHO05D009796 6.4e-10 67.4 30 100.0
Gorai.011G262800 Gossypium raimondii HOM05D007699 ORTHO05D009796 6.4e-10 67.4 30 100.0
PGSC0003DMG400029597 Solanum tuberosum HOM05D000312 ORTHO05D000221 6.4e-10 67.4 30 100.0
Phvul.009G076400 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 8.4e-10 67.0 31 93.5
EL10Ac6g13625 Beta vulgaris HOM05D007699 ORTHO05D009796 1.1e-09 66.6 44 72.7
EL10Ac6g13621 Beta vulgaris HOM05D007699 ORTHO05D009796 7.1e-09 63.9 36 80.6
Pp3c24_16090 Physcomitrium patens HOM05D007699 ORTHO05D009796 9.3e-09 63.5 40 70.0
Pp3c24_16091 Physcomitrium patens HOM05D007699 ORTHO05D009796 9.3e-09 63.5 40 70.0
Medtr2g101670 Medicago truncatula HOM05D007699 ORTHO05D009796 3.5e-08 61.6 33 81.8
SHI28974 Sapria himalayana HOM05D007699 ORTHO05D009796 2.3e-07 58.9 41 70.7
Medtr6g070990 Medicago truncatula HOM05D007699 ORTHO05D009796 5.1e-07 57.8 26 100.0
CBR_g18975 Chara braunii HOM05D016315 ORTHO05D136335 2.5e-06 55.5 38 73.7
Pp3c27_1930 Physcomitrium patens HOM05D007699 ORTHO05D009796 3.3e-06 55.1 32 75.0


User provided reference genes

Program Settings