Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 1.2e-59 233.0 120 100.0
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 3.0e-55 218.4 120 95.0
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 8.7e-55 216.9 120 94.2
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 7.7e-51 203.8 119 87.4
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 1.8e-47 192.6 118 83.9
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 2.3e-47 192.2 118 82.2
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 5.1e-47 191.0 118 83.9
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 5.1e-47 191.0 118 83.9
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 5.1e-47 191.0 118 81.4
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 2.0e-46 189.1 118 83.9
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 2.5e-46 188.7 119 79.8
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 3.3e-46 188.3 118 80.5
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 3.3e-46 188.3 118 80.5
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 4.3e-46 188.0 118 79.7
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 4.3e-46 188.0 119 80.7
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 5.7e-46 187.6 119 80.7
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 1.3e-45 186.4 118 81.4
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 1.3e-45 186.4 118 81.4
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 2.2e-45 185.7 119 79.8
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 2.2e-45 185.7 118 80.5
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 3.7e-45 184.9 118 80.5
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 4.8e-45 184.5 118 80.5
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 6.3e-45 184.1 118 80.5
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 6.3e-45 184.1 118 78.8
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 6.3e-45 184.1 117 80.3
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 6.3e-45 184.1 118 80.5
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 6.3e-45 184.1 116 79.3
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 8.2e-45 183.7 118 78.8
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 8.2e-45 183.7 118 77.1
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 8.2e-45 183.7 117 78.6
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 8.2e-45 183.7 118 79.7
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 1.4e-44 183.0 118 78.8
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 4.1e-44 181.4 118 76.3
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 5.3e-44 181.0 115 76.5
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 5.3e-44 181.0 118 79.7
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 9.1e-44 180.3 118 80.5
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 9.1e-44 180.3 118 76.3
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 9.1e-44 180.3 118 80.5
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.2e-43 179.9 115 76.5
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 1.2e-43 179.9 118 76.3
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.5e-43 179.5 115 75.7
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 2.0e-43 179.1 118 76.3
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 2.6e-43 178.7 118 74.6
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 3.4e-43 178.3 118 75.4
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 3.4e-43 178.3 117 76.9
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 5.9e-43 177.6 117 73.5
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 5.9e-43 177.6 117 73.5
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 5.9e-43 177.6 117 73.5
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 7.7e-43 177.2 117 74.4
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 1.3e-42 176.4 117 74.4
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 1.7e-42 176.0 117 72.6
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 1.7e-42 176.0 118 75.4
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 2.9e-42 175.3 119 76.5
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 2.9e-42 175.3 118 73.7
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 5.0e-42 174.5 117 74.4
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 6.5e-42 174.1 117 74.4
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 6.5e-42 174.1 118 76.3
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 6.5e-42 174.1 118 72.0
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 6.5e-42 174.1 118 72.9
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 6.5e-42 174.1 118 72.9
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 1.1e-41 173.3 118 75.4
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 1.4e-41 172.9 117 72.6
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 1.9e-41 172.6 117 72.6
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 5.5e-41 171.0 118 73.7
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 5.5e-41 171.0 117 70.9
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 9.4e-41 170.2 118 72.9
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 2.7e-40 168.7 118 70.3
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 4.7e-40 167.9 118 73.7
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 4.7e-40 167.9 118 69.5
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 6.1e-40 167.5 118 75.4
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 7.9e-40 167.2 118 69.5
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 7.9e-40 167.2 150 62.7
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 7.9e-40 167.2 118 70.3
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 1.0e-39 166.8 135 65.2
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 1.0e-39 166.8 118 75.4
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 3.9e-39 164.9 118 69.5
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 6.7e-39 164.1 118 72.9
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 6.7e-39 164.1 118 72.9
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 2.0e-38 162.5 118 72.0
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 3.3e-38 161.8 114 70.2
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 2.2e-37 159.1 116 71.6
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 6.3e-37 157.5 119 66.4
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 3.1e-36 155.2 118 64.4
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 4.1e-36 154.8 107 70.1
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 1.2e-35 153.3 118 63.6
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 1.5e-35 152.9 95 78.9
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 4.5e-35 151.4 118 62.7
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.7e-34 149.4 103 70.9
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 1.7e-34 149.4 121 62.0
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 2.9e-34 148.7 122 59.8
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 3.8e-34 148.3 172 48.8
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 2.5e-33 145.6 115 61.7
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 3.0e-31 138.7 85 76.5
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 2.6e-30 135.6 87 81.6
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 4.4e-30 134.8 86 82.6
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 4.8e-29 131.3 86 79.1
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 4.8e-29 131.3 85 81.2
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 9.1e-28 127.1 94 66.0
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 2.0e-27 125.9 86 73.3
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 3.5e-27 125.2 114 57.9
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 7.7e-27 124.0 89 74.2
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 2.2e-26 122.5 86 75.6
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 6.5e-26 120.9 109 53.2
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 8.5e-26 120.6 118 52.5
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 8.5e-26 120.6 88 69.3
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 1.5e-25 119.8 81 69.1
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 2.1e-24 115.9 87 65.5
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 8.0e-24 114.0 112 45.5
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 4.0e-23 111.7 89 64.0
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 5.7e-22 107.8 83 60.2
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.4e-20 103.2 115 49.6
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 5.0e-18 94.7 54 81.5
Nn3g20226 Nelumbo nucifera HOM05D007012 ORTHO05D008882 1.2e-08 63.5 116 38.8


User provided reference genes

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