Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 1.1e-73 280.0 163 100.0
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 1.5e-49 199.9 162 75.9
Potri.001G371800 Populus trichocarpa HOM05D005932 ORTHO05D006213 3.6e-27 125.6 133 69.9
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 2.4e-23 112.8 142 45.8
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 1.2e-22 110.5 143 49.0
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.1e-20 104.0 157 41.4
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 2.5e-20 102.8 138 47.1
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 1.2e-19 100.5 132 47.0
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.1e-19 99.8 149 40.9
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 2.8e-19 99.4 150 42.0
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 1.2e-17 94.0 151 40.4
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 2.9e-16 89.4 137 41.6
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 5.4e-15 85.1 138 42.8
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 6.0e-14 81.6 134 38.1
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 1.0e-13 80.9 112 43.8
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 1.0e-13 80.9 119 43.7
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.7e-13 80.1 119 44.5
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 1.7e-13 80.1 146 38.4
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 3.0e-13 79.3 126 42.1
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 3.9e-13 79.0 150 40.0
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 5.6e-12 75.1 141 34.0
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 7.3e-12 74.7 145 37.2
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 9.5e-12 74.3 143 36.4
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 1.2e-11 73.9 143 35.7
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 2.1e-11 73.2 128 39.1
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 2.8e-11 72.8 134 35.8
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 3.6e-11 72.4 137 39.4
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 4.7e-11 72.0 119 40.3
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 6.2e-11 71.6 129 39.5
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 1.1e-10 70.9 133 39.8
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.1e-10 70.9 143 45.5
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 1.4e-10 70.5 139 36.7
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 1.8e-10 70.1 138 36.2
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 2.3e-10 69.7 143 39.2
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 2.3e-10 69.7 151 31.1
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 5.2e-10 68.6 128 37.5
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 5.2e-10 68.6 124 39.5
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 5.2e-10 68.6 148 35.8
TWI63G1224 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 5.2e-10 68.6 119 39.5
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 6.8e-10 68.2 151 33.1
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 6.8e-10 68.2 143 37.1
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 8.9e-10 67.8 141 34.8
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 1.5e-09 67.0 120 39.2
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 2.0e-09 66.6 147 36.1
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 2.6e-09 66.2 132 37.9
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 2.6e-09 66.2 134 35.8
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 2.6e-09 66.2 138 34.8
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 3.4e-09 65.9 129 34.9
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 5.8e-09 65.1 110 40.0
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 5.8e-09 65.1 135 36.3
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 7.5e-09 64.7 142 33.8
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 9.8e-09 64.3 156 34.0
Lalb_Chr07g0185951 Lupinus albus HOM05D005932 ORTHO05D006213 9.8e-09 64.3 140 35.0
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 1.3e-08 63.9 151 30.5
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 1.7e-08 63.5 113 42.5
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 4.9e-08 62.0 141 30.5
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 4.9e-08 62.0 130 36.9
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 6.4e-08 61.6 123 39.8
Actinidia32363 Actinidia chinensis HOM05D005932 ORTHO05D006213 8.3e-08 61.2 120 34.2
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 1.1e-07 60.8 128 32.8
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 1.4e-07 60.5 140 32.1
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 1.9e-07 60.1 136 29.4
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 2.4e-07 59.7 125 34.4
Cpa.g.sc166.34 Carica papaya HOM05D005932 ORTHO05D006213 3.2e-07 59.3 104 47.1
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 3.2e-07 59.3 131 36.6
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 5.4e-07 58.5 135 38.5
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 5.4e-07 58.5 116 41.4
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 7.1e-07 58.2 134 45.5
Medtr2g030220 Medicago truncatula HOM05D005932 ORTHO05D006213 7.1e-07 58.2 137 35.8
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 7.1e-07 58.2 140 34.3
AL7G32200 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 9.2e-07 57.8 143 32.9
AT4G21740 Arabidopsis thaliana HOM05D005932 ORTHO05D006213 1.2e-06 57.4 137 33.6
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 1.2e-06 57.4 148 33.1
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 2.1e-06 56.6 145 35.2
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 2.7e-06 56.2 150 30.0
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 2.7e-06 56.2 120 35.0
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 2.7e-06 56.2 123 35.8
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 3.5e-06 55.8 141 34.0
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 3.5e-06 55.8 138 34.1
Thhalv10009012m.g Eutrema salsugineum HOM05D012212 ORTHO05D006213 4.6e-06 55.5 149 34.9
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 4.6e-06 55.5 148 33.8
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 4.6e-06 55.5 148 33.1
Cfa000817 Carpinus fangiana HOM05D005932 ORTHO05D006213 6.0e-06 55.1 120 34.2


User provided reference genes

Program Settings