Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 7.0e-201 703.7 356 100.0
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 1.3e-175 619.8 352 88.4
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 3.9e-127 458.8 359 68.0
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 1.7e-122 443.4 355 64.8
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 1.9e-121 439.9 360 63.9
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 2.1e-120 436.4 368 62.5
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 2.7e-120 436.0 359 64.1
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 1.3e-119 433.7 355 63.7
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 6.7e-119 431.4 357 63.0
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 8.7e-119 431.0 360 61.9
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 1.9e-118 429.9 366 62.3
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 3.3e-118 429.1 358 62.0
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 5.7e-118 428.3 359 62.4
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 1.6e-117 426.8 360 61.7
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 2.8e-117 426.0 371 61.7
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 3.7e-117 425.6 360 61.4
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 2.4e-116 422.9 360 62.8
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 3.1e-116 422.5 362 62.2
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 4.1e-116 422.2 354 63.0
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 4.1e-116 422.2 360 61.9
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 5.3e-116 421.8 352 61.9
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 1.5e-115 420.2 354 61.0
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 7.7e-115 417.9 353 61.2
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 1.9e-113 413.3 359 59.6
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 2.5e-113 412.9 351 59.8
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 3.2e-113 412.5 358 62.3
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 1.2e-112 410.6 351 59.8
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 1.2e-112 410.6 351 59.8
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 1.2e-112 410.6 351 59.8
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 1.2e-112 410.6 351 59.8
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 1.6e-112 410.2 359 60.7
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 1.6e-112 410.2 355 61.7
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 3.6e-112 409.1 359 59.1
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 1.0e-111 407.5 351 59.3
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 3.0e-111 406.0 352 59.9
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 3.9e-111 405.6 365 58.4
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 1.1e-110 404.1 349 59.6
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 2.0e-110 403.3 354 57.9
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 2.0e-110 403.3 357 58.5
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 7.4e-110 401.4 352 59.1
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 9.7e-110 401.0 355 59.7
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 1.3e-109 400.6 360 57.5
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 1.3e-109 400.6 354 60.5
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 2.8e-109 399.4 337 62.0
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 2.8e-109 399.4 359 57.7
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 1.1e-108 397.5 352 58.5
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 1.8e-108 396.7 354 56.5
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 3.1e-108 396.0 356 57.0
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 3.1e-108 396.0 353 57.2
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 5.3e-108 395.2 304 62.2
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 6.9e-108 394.8 352 60.5
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 2.0e-107 393.3 349 58.5
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 5.9e-107 391.7 352 59.4
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 1.3e-106 390.6 348 57.5
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 1.7e-106 390.2 331 58.9
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 1.1e-105 387.5 361 55.7
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 7.2e-105 384.8 307 61.2
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 9.4e-105 384.4 357 56.6
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 4.7e-104 382.1 352 58.0
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 1.0e-103 380.9 362 56.9
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 1.0e-103 380.9 356 57.0
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 1.8e-103 380.2 348 56.3
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 3.0e-103 379.4 306 62.4
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 3.9e-103 379.0 309 62.1
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 8.8e-103 377.9 351 57.5
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 1.1e-102 377.5 351 55.0
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 1.1e-102 377.5 307 59.9
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 2.0e-102 376.7 361 55.7
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 2.6e-102 376.3 353 57.2
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 3.3e-102 375.9 357 57.1
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 4.4e-102 375.6 300 59.3
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 7.4e-102 374.8 347 55.6
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 1.3e-101 374.0 343 57.1
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 2.2e-101 373.2 360 56.1
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 1.8e-100 370.2 302 61.6
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 3.1e-100 369.4 358 55.6
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 4.1e-100 369.0 314 58.6
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 5.3e-100 368.6 358 55.6
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 1.2e-99 367.5 302 61.3
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 2.6e-99 366.3 367 54.0
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 4.5e-99 365.5 418 50.5
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 1.2e-96 357.5 350 52.9
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 8.0e-96 354.8 377 51.7
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 3.3e-94 349.4 308 56.5
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 6.5e-90 335.1 269 60.2
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 2.5e-89 333.2 273 60.8
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 2.7e-88 329.7 299 57.2
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 4.7e-88 328.9 331 53.5
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 1.4e-87 327.4 268 59.7
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 1.4e-87 327.4 308 52.9
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 1.2e-80 304.3 269 55.8
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 3.6e-80 302.8 346 48.6
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 1.8e-79 300.4 299 52.2
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 2.2e-77 293.5 305 51.8
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 3.7e-77 292.7 370 45.9
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 2.0e-75 287.0 316 46.8
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 2.3e-74 283.5 271 52.4
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 1.8e-63 247.3 266 51.1
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 5.0e-58 229.2 261 45.6
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 1.2e-51 208.0 381 35.2
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 6.8e-47 192.2 186 51.6
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 4.4e-46 189.5 133 68.4
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 9.9e-46 188.3 221 51.1
Haze_01866 Corylus avellana HOM05D006843 ORTHO05D008517 1.3e-45 188.0 191 55.5
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 1.4e-39 167.9 141 58.2
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 5.2e-39 166.0 141 58.2
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 1.2e-38 164.9 141 56.7
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 1.3e-37 161.4 186 48.4
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 3.3e-33 146.7 170 47.1
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 2.4e-31 140.6 122 57.4
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 3.4e-22 110.2 255 31.8
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 3.8e-21 106.7 101 53.5
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 6.4e-21 105.9 87 56.3
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 1.4e-20 104.8 203 30.5
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 7.9e-11 72.4 117 35.9
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 1.3e-10 71.6 61 57.4
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 1.1e-07 62.0 56 58.9


User provided reference genes

Program Settings