Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G083700 Populus trichocarpa HOM05D004641 ORTHO05D005871 5.4e-159 564.3 289 100.0
Sabra11G0066400 Salix brachista HOM05D004641 ORTHO05D005871 1.7e-141 506.1 287 91.6
Cpa.g.sc128.14 Carica papaya HOM05D004641 ORTHO05D005871 1.8e-122 443.0 286 77.6
TWI12G0809 Tripterygium wilfordii HOM05D004641 ORTHO05D005871 6.9e-122 441.0 287 76.7
Gohir.A13G074000 Gossypium hirsutum HOM05D004641 ORTHO05D005871 5.8e-121 438.0 287 78.0
Gorai.013G084700 Gossypium raimondii HOM05D004641 ORTHO05D005871 7.6e-121 437.6 287 77.7
PGR102G3009 Punica granatum HOM05D004641 ORTHO05D005871 2.9e-120 435.6 286 76.6
COL.COLO4_22996 Corchorus olitorius HOM05D004641 ORTHO05D005871 8.4e-120 434.1 288 77.8
GSVIVG01020002001 Vitis vinifera HOM05D004641 ORTHO05D005871 1.1e-119 433.7 288 75.3
Gohir.D13G074100 Gossypium hirsutum HOM05D004641 ORTHO05D005871 2.4e-119 432.6 287 77.0
Duzib268G0036 Durio zibethinus HOM05D004641 ORTHO05D005871 4.2e-119 431.8 288 76.7
Prupe.1G273100 Prunus persica HOM05D004641 ORTHO05D005871 4.6e-118 428.3 287 73.5
CANSAT64G1560 Cannabis sativa HOM05D004641 ORTHO05D005871 2.3e-117 426.0 291 74.9
CSS0000565 Camellia sinensis var. sinensis HOM05D004641 ORTHO05D005871 1.5e-116 423.3 287 73.9
CSS0029182 Camellia sinensis var. sinensis HOM05D004641 ORTHO05D005871 2.5e-116 422.5 287 73.5
Ciclev10032310m.g Citrus clementina HOM05D004641 ORTHO05D005871 2.5e-116 422.5 287 73.9
CiPaw.05G136500 Carya illinoinensis HOM05D004641 ORTHO05D005871 3.3e-116 422.2 287 74.2
Glyma.02G106600 Glycine max HOM05D004641 ORTHO05D005871 4.8e-115 418.3 287 73.5
RcHm_v2.0_Chr4g0439951 Rosa chinensis HOM05D004641 ORTHO05D005871 8.1e-115 417.5 282 74.5
QL03p064370 Quercus lobata HOM05D004641 ORTHO05D005871 1.8e-114 416.4 287 74.9
Actinidia04038 Actinidia chinensis HOM05D004641 ORTHO05D005871 2.4e-114 416.0 289 72.3
Lj3A1038G72 Lonicera japonica HOM05D004641 ORTHO05D005871 3.1e-114 415.6 287 73.2
Nitab4.5_0000703g0120 Nicotiana tabacum HOM05D004641 ORTHO05D005871 4.5e-113 411.8 286 74.5
FAN22G2174 Fragaria x ananassa HOM05D004641 ORTHO05D005871 5.8e-113 411.4 287 72.1
FvH4_4g31460 Fragaria vesca HOM05D004641 ORTHO05D005871 9.9e-113 410.6 286 72.0
Peaxi162Scf00541g00527 Petunia axillaris HOM05D004641 ORTHO05D005871 4.9e-112 408.3 286 74.5
Phvul.002G086150 Phaseolus vulgaris HOM05D004641 ORTHO05D005871 1.1e-111 407.1 287 70.0
THA.LOC104822117 Tarenaya hassleriana HOM05D004641 ORTHO05D005871 1.4e-111 406.8 285 70.2
VMungo1215G3365 Vigna mungo HOM05D004641 ORTHO05D005871 1.4e-111 406.8 287 69.7
Eucgr.B03435 Eucalyptus grandis HOM05D004641 ORTHO05D005871 1.9e-111 406.4 286 71.7
Psat2g121160 Pisum sativum HOM05D004641 ORTHO05D005871 2.4e-111 406.0 287 70.4
TAR629G2466 Trochodendron aralioides HOM05D004641 ORTHO05D005871 4.2e-111 405.2 287 73.9
Glyma.01G046400 Glycine max HOM05D004641 ORTHO05D005871 9.3e-111 404.1 287 70.7
Lalb_Chr10g0098211 Lupinus albus HOM05D004641 ORTHO05D005871 9.3e-111 404.1 287 71.1
PGSC0003DMG400003384 Solanum tuberosum HOM05D004641 ORTHO05D005871 9.3e-111 404.1 286 73.1
Oeu001572.1 Olea europaea HOM05D004641 ORTHO05D005871 1.6e-110 403.3 286 69.2
TAR622G0412 Trochodendron aralioides HOM05D004641 ORTHO05D005871 1.6e-110 403.3 293 71.7
Solyc05g007450.3 Solanum lycopersicum HOM05D004641 ORTHO05D005871 2.1e-110 402.9 286 72.7
Medtr7g039370 Medicago truncatula HOM05D004641 ORTHO05D005871 2.7e-110 402.5 287 69.7
Medtr5g040250 Medicago truncatula HOM05D004641 ORTHO05D005871 3.5e-110 402.1 287 69.7
Sopen05g003330 Solanum pennellii HOM05D004641 ORTHO05D005871 4.6e-110 401.7 286 73.1
Cc11_g13100 Coffea canephora HOM05D004641 ORTHO05D005871 1.3e-109 400.2 286 70.3
Nn3g17219 Nelumbo nucifera HOM05D004641 ORTHO05D005871 2.3e-109 399.4 293 70.3
MSTRG.7808 Avicennia marina HOM05D004641 ORTHO05D005871 3.0e-109 399.1 284 69.7
Ca_24263_v3 Cicer arietinum L. HOM05D004641 ORTHO05D005871 5.1e-109 398.3 287 69.0
FAN17G1817 Fragaria x ananassa HOM05D004641 ORTHO05D005871 1.9e-108 396.4 297 69.0
Lj2g0007835 Lotus japonicus HOM05D004641 ORTHO05D005871 5.6e-108 394.8 288 69.8
MD13G1073100 Malus domestica HOM05D004641 ORTHO05D005871 1.3e-107 393.7 259 74.5
SalBow2G2171 Salvia bowleyana HOM05D004641 ORTHO05D005871 3.7e-107 392.1 289 67.8
Manes.01G186500 Manihot esculenta HOM05D004641 ORTHO05D005871 6.2e-107 391.3 229 85.6
HanXRQChr12g0362561 Helianthus annuus HOM05D004641 ORTHO05D005871 1.8e-106 389.8 279 70.3
Aa31LG7G8260 Aethionema arabicum HOM05D004641 ORTHO05D005871 2.4e-106 389.4 289 69.6
MBI05_g35443_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 3.1e-106 389.0 292 69.2
BcaC05g26381 Brassica carinata HOM05D004641 ORTHO05D005871 9.0e-106 387.5 289 69.9
C05p24110 Brassica napus HOM05D004641 ORTHO05D005871 9.0e-106 387.5 289 69.9
BolC5t31146H Brassica oleracea HOM05D004641 ORTHO05D005871 9.0e-106 387.5 289 69.9
FAN12G2116 Fragaria x ananassa HOM05D001668 ORTHO05D005871 9.0e-106 387.5 271 71.6
Migut.L01304 Erythranthe guttata HOM05D004641 ORTHO05D005871 1.2e-105 387.1 280 67.9
BraA09t39524Z Brassica rapa HOM05D004641 ORTHO05D005871 1.5e-105 386.7 278 70.9
DCAR_007149 Daucus carota HOM05D004641 ORTHO05D005871 2.0e-105 386.3 289 69.6
FAN07G1510 Fragaria x ananassa HOM05D004641 ORTHO05D005871 5.8e-105 384.8 271 71.6
PSO478G0089 Papaver somniferum HOM05D004641 ORTHO05D005871 7.6e-105 384.4 285 67.7
ECA233G1872 Erigeron canadensis HOM05D004641 ORTHO05D005871 9.9e-105 384.0 279 68.8
CAN.G58.35 Capsicum annuum HOM05D004641 ORTHO05D005871 1.7e-104 383.3 286 69.9
A09p40260 Brassica napus HOM05D004641 ORTHO05D005871 1.4e-103 380.2 278 69.8
PSO017G4882 Papaver somniferum HOM05D004641 ORTHO05D005871 2.5e-103 379.4 285 67.4
ClCG11G009310 Citrullus lanatus HOM05D004641 ORTHO05D005871 4.2e-103 378.6 280 69.3
Aqoxy3G03361 Aquilegia oxysepala HOM05D004641 ORTHO05D005871 5.5e-103 378.3 292 67.5
AL1G38720 Arabidopsis lyrata HOM05D004641 ORTHO05D005871 5.5e-103 378.3 281 68.3
CiPaw.06G083900 Carya illinoinensis HOM05D004641 ORTHO05D005871 5.5e-103 378.3 244 78.3
BcaC07g39267 Brassica carinata HOM05D004641 ORTHO05D005871 9.3e-103 377.5 281 68.7
C08p22760 Brassica napus HOM05D004641 ORTHO05D005871 9.3e-103 377.5 281 68.7
BolC8t49912H Brassica oleracea HOM05D004641 ORTHO05D005871 9.3e-103 377.5 281 68.7
Haze_12020 Corylus avellana HOM05D004641 ORTHO05D005871 1.2e-102 377.1 287 69.3
AT1G26840 Arabidopsis thaliana HOM05D004641 ORTHO05D005871 1.6e-102 376.7 281 68.0
HanXRQChr08g0210501 Helianthus annuus HOM05D004641 ORTHO05D005871 2.1e-102 376.3 279 68.8
Sc11g0001860 Simmondsia chinensis HOM05D004641 ORTHO05D005871 2.1e-102 376.3 286 67.1
CARHR025060 Cardamine hirsuta HOM05D004641 ORTHO05D005871 2.7e-102 375.9 281 69.0
Sp1g21940 Schrenkiella parvula HOM05D004641 ORTHO05D005871 3.5e-102 375.6 281 67.6
Hund25250 Selenicereus undatus HOM05D004641 ORTHO05D005871 4.6e-102 375.2 286 67.1
Thecc.02G351000 Theobroma cacao HOM05D004641 ORTHO05D005871 4.6e-102 375.2 230 82.6
Atru.chr11.1801 Acer truncatum HOM05D004641 ORTHO05D005871 6.0e-102 374.8 216 85.6
BraA08t34696Z Brassica rapa HOM05D004641 ORTHO05D005871 6.0e-102 374.8 289 67.8
Thhalv10008398m.g Eutrema salsugineum HOM05D004641 ORTHO05D005871 6.0e-102 374.8 287 66.6
A08p27580 Brassica napus HOM05D004641 ORTHO05D005871 7.9e-102 374.4 289 67.8
vmacro04307 Vaccinium macrocarpon HOM05D004641 ORTHO05D005871 7.9e-102 374.4 230 78.3
Carub.0001s2410 Capsella rubella HOM05D004641 ORTHO05D005871 8.7e-101 370.9 277 69.0
SGA_v2.0_scaffold302G47825 Striga asiatica HOM05D004641 ORTHO05D005871 1.5e-100 370.2 288 67.4
Nitab4.5_0012364g0020 Nicotiana tabacum HOM05D004641 ORTHO05D005871 1.9e-100 369.8 286 68.5
AUR62028790 Chenopodium quinoa HOM05D004641 ORTHO05D005871 2.5e-100 369.4 286 65.7
Zm00001eb328260 Zea mays HOM05D004641 ORTHO05D005871 2.5e-100 369.4 287 66.9
arahy.Tifrunner.gnm1.ann1.K7EFN7 Arachis hypogaea HOM05D004641 ORTHO05D005871 3.3e-100 369.0 292 65.8
AUR62005767 Chenopodium quinoa HOM05D004641 ORTHO05D005871 4.3e-100 368.6 286 65.7
BcaB03g12011 Brassica carinata HOM05D004641 ORTHO05D005871 3.7e-99 365.5 289 65.7
Rhsim07G0243500 Rhododendron simsii HOM05D004641 ORTHO05D005871 4.8e-99 365.2 229 76.9
Aqoxy5G03781 Aquilegia oxysepala HOM05D004641 ORTHO05D005871 8.2e-99 364.4 293 67.2
CsaV3_2G010800 Cucumis sativus L. HOM05D004641 ORTHO05D005871 3.1e-98 362.5 280 66.1
Os07g0628600 Oryza sativa ssp. japonica HOM05D004641 ORTHO05D005871 6.9e-98 361.3 295 65.4
MD16G1074100 Malus domestica HOM05D004641 ORTHO05D005871 4.5e-97 358.6 280 66.8
SGA_v2.0_scaffold53G19380 Striga asiatica HOM05D004641 ORTHO05D005871 5.8e-97 358.2 288 66.0
EL10Ac6g13193 Beta vulgaris HOM05D004641 ORTHO05D005871 2.9e-96 355.9 320 60.3
arahy.Tifrunner.gnm1.ann1.ITG5Q4 Arachis hypogaea HOM05D004641 ORTHO05D005871 6.5e-96 354.8 293 62.8
MELO3C008530.2 Cucumis melo HOM05D004641 ORTHO05D005871 1.1e-95 354.0 265 67.5
HPP92_016908 Vanilla planifolia HOM05D004641 ORTHO05D005871 2.7e-94 349.4 286 64.7
Lalb_Chr17g0340601 Lupinus albus HOM05D004641 ORTHO05D005871 8.7e-93 344.4 245 71.4
Ah.03g135170 Amaranthus hybridus HOM05D004641 ORTHO05D005871 1.5e-92 343.6 286 62.9
Sed0021592 Sechium edule HOM05D004641 ORTHO05D005871 3.3e-92 342.4 281 65.1
ATR0800G170 Amborella trichopoda HOM05D004641 ORTHO05D005871 5.9e-89 331.6 229 71.6
Sp5g24800 Schrenkiella parvula HOM05D004641 ORTHO05D005871 6.5e-88 328.2 253 66.8
Psat0s2466g0040 Pisum sativum HOM05D004641 ORTHO05D005871 1.1e-87 327.4 238 68.5
Sed0002473 Sechium edule HOM05D004641 ORTHO05D005871 1.1e-87 327.4 243 67.5
CDE04G3358 Ceratophyllum demersum HOM05D004641 ORTHO05D005871 1.2e-86 323.9 295 59.3
Dinv16637 Davidia involucrata HOM05D004641 ORTHO05D005871 1.2e-86 323.9 217 76.0
Oeu054890.1 Olea europaea HOM05D004641 ORTHO05D005871 6.1e-86 321.6 231 69.3
Oeu054889.1 Olea europaea HOM05D004641 ORTHO05D005871 2.3e-85 319.7 231 69.3
Lsat_1_v5_gn_8_52860 Lactuca sativa HOM05D004641 ORTHO05D005871 3.9e-85 318.9 276 60.5
SEGI_09090 Sequoiadendron giganteum HOM05D004641 ORTHO05D005871 1.5e-81 307.0 230 66.5
CARHR062650 Cardamine hirsuta HOM05D004641 ORTHO05D005871 5.0e-80 302.0 245 62.9
SHI55061 Sapria himalayana HOM05D004641 ORTHO05D005871 4.7e-78 295.4 235 62.6
AagrBONN_evm.TU.Sc2ySwM_228.4149 Anthoceros agrestis HOM05D004641 ORTHO05D005871 7.0e-74 281.6 305 48.9
Mapoly0064s0110 Marchantia polymorpha HOM05D004641 ORTHO05D005871 1.0e-69 267.7 263 52.9
Pp3c13_2030 Physcomitrium patens HOM05D004641 ORTHO05D005871 3.0e-69 266.2 289 46.7
MBI09_g01021_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 1.3e-64 250.8 213 65.3
SMO114G0050 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 1.5e-60 237.3 197 52.8
Gohir.A01G134350 Gossypium hirsutum HOM05D004641 ORTHO05D005871 5.7e-60 235.3 154 74.0
SMO117G0352 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 9.7e-60 234.6 197 52.8
unitig_22.g6910 Utricularia gibba HOM05D004641 ORTHO05D005871 1.3e-59 234.2 266 51.1
SMO254G0007 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 2.8e-59 233.0 197 51.8
SMO254G0005 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 6.3e-59 231.9 197 51.8
Gohir.A07G052500 Gossypium hirsutum HOM05D004641 ORTHO05D005871 5.3e-58 228.8 139 79.1
MBI02_g14195_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 4.2e-55 219.2 214 58.9
MBI05_g01300_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 4.0e-53 212.6 227 55.1
Gohir.A08G223448 Gossypium hirsutum HOM05D004641 ORTHO05D005871 1.8e-50 203.8 138 73.2
SMO254G0008 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 1.3e-48 197.6 197 46.7
CDE08G0800 Ceratophyllum demersum HOM05D004641 ORTHO05D005871 1.5e-47 194.1 263 46.4
MBI10_g44256_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 1.4e-45 187.6 171 59.1
CBR_g31088 Chara braunii HOM05D000019 ORTHO05D000048 3.6e-38 162.9 188 46.3
Thecc.03G087000 Theobroma cacao HOM05D004641 ORTHO05D005871 8.3e-35 151.8 119 69.7
SMO254G0011 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 1.5e-31 141.0 182 39.6
MBI10_g06043_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 1.6e-30 137.5 207 44.4
Cre06.g285650 Chlamydomonas reinhardtii HOM05D004641 ORTHO05D005871 6.2e-30 135.6 190 41.6
SMO254G0019 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 1.8e-29 134.0 199 37.2
MD16G1073900 Malus domestica HOM05D004641 ORTHO05D005871 6.8e-29 132.1 83 77.1
MBI10_g47167_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 5.8e-28 129.0 192 45.8
C05p19510 Brassica napus HOM05D004641 ORTHO05D005871 4.9e-27 125.9 99 65.7
BolC5t30653H Brassica oleracea HOM05D004641 ORTHO05D005871 4.9e-27 125.9 99 65.7
TPR.G37129 Trifolium pratense HOM05D004641 ORTHO05D005871 1.4e-26 124.4 76 77.6
PRCOL_00006308 Prasinoderma coloniale HOM05D004641 ORTHO05D005871 4.3e-23 112.8 217 30.9
MBI13_g45115_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 2.2e-19 100.5 60 78.3
MBI14_g27757_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 5.4e-18 95.9 58 75.9
MBI18_g33078_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 1.6e-17 94.4 56 76.8
CBR_g31090 Chara braunii HOM05D004641 ORTHO05D005871 3.5e-17 93.2 91 49.5
MBI11_g16036_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 4.6e-17 92.8 58 74.1
MBI16_g45579_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 5.6e-15 85.9 64 67.2
MBI13_g16082_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 1.2e-12 78.2 54 68.5
A10p02040 Brassica napus HOM05D000207 ORTHO05D013918 4.9e-11 72.8 51 66.7
A02p16560 Brassica napus HOM05D004641 ORTHO05D005871 1.2e-09 68.2 90 44.4
A09p47150 Brassica napus HOM05D004641 ORTHO05D022007 8.7e-08 62.0 60 56.7
BraA09t40177Z Brassica rapa HOM05D004641 ORTHO05D022007 8.7e-08 62.0 60 56.7
A09p29530 Brassica napus HOM05D004641 ORTHO05D022007 5.6e-07 59.3 61 52.5
BolC6t36313H Brassica oleracea HOM05D004641 ORTHO05D022007 2.1e-06 57.4 44 63.6
EL10Ac2g04116 Beta vulgaris HOM05D004641 ORTHO05D005871 2.8e-06 57.0 46 63.0
PSO063G3446 Papaver somniferum HOM05D004334 ORTHO05D004763 3.6e-06 56.6 51 54.9
BraA03t14352Z Brassica rapa HOM05D004641 ORTHO05D022007 8.1e-06 55.5 46 58.7


User provided reference genes

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