Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G078401 Populus trichocarpa HOM05D001595 ORTHO05D001573 1.6e-58 229.2 110 100.0
Sabra03G0021300 Salix brachista HOM05D001595 ORTHO05D001573 8.1e-15 84.0 47 85.1
Sabra18G0027400 Salix brachista HOM05D001595 ORTHO05D001573 1.4e-14 83.2 47 85.1
Potri.009G077000 Populus trichocarpa HOM05D001595 ORTHO05D001573 2.4e-14 82.4 58 72.4
Potri.001G353600 Populus trichocarpa HOM05D001595 ORTHO05D001573 6.9e-14 80.9 61 63.9
Sabra09G0058800 Salix brachista HOM05D001595 ORTHO05D001573 6.9e-14 80.9 59 69.5
Potri.003G191800 Populus trichocarpa HOM05D001595 ORTHO05D001573 3.8e-12 75.1 41 87.8
Gohir.A05G144200 Gossypium hirsutum HOM05D001595 ORTHO05D001573 4.2e-11 71.6 61 62.3
Gohir.D05G146600 Gossypium hirsutum HOM05D001595 ORTHO05D001573 4.2e-11 71.6 61 62.3
Gorai.009G150400 Gossypium raimondii HOM05D001595 ORTHO05D001573 4.2e-11 71.6 61 62.3
Atru.chr13.2076 Acer truncatum HOM05D001595 ORTHO05D001573 1.2e-10 70.1 50 64.0
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.7e-10 68.9 77 50.6
Ciclev10003810m.g Citrus clementina HOM05D001595 ORTHO05D001573 1.3e-09 66.6 48 64.6
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.3e-09 66.6 77 50.6
Manes.17G065250 Manihot esculenta HOM05D001595 ORTHO05D001573 2.3e-09 65.9 48 68.8
Thecc.08G155000 Theobroma cacao HOM05D001595 ORTHO05D001573 2.3e-09 65.9 48 64.6
MD10G1029400 Malus domestica HOM05D001595 ORTHO05D001573 3.0e-09 65.5 65 50.8
SHI02936 Sapria himalayana HOM05D001595 ORTHO05D001573 3.0e-09 65.5 53 64.2
Lalb_Chr08g0239061 Lupinus albus HOM05D001595 ORTHO05D001573 3.9e-09 65.1 61 55.7
unitig_7.g29872 Utricularia gibba HOM05D001595 ORTHO05D001573 5.1e-09 64.7 46 63.0
unitig_748.g8664 Utricularia gibba HOM05D001595 ORTHO05D001573 5.1e-09 64.7 46 63.0
Atru.chr8.1692 Acer truncatum HOM05D001595 ORTHO05D001573 6.6e-09 64.3 38 71.1
Atru.chr13.2075 Acer truncatum HOM05D001595 ORTHO05D001573 1.5e-08 63.2 59 57.6
Prupe.8G034800 Prunus persica HOM05D001595 ORTHO05D001573 1.5e-08 63.2 43 62.8
Thecc.06G138400 Theobroma cacao HOM05D001595 ORTHO05D001573 1.5e-08 63.2 59 57.6
COL.COLO4_29870 Corchorus olitorius HOM05D001595 ORTHO05D001573 2.5e-08 62.4 50 60.0
Oeu012712.1 Olea europaea HOM05D001595 ORTHO05D001573 2.5e-08 62.4 58 53.4
DCAR_027561 Daucus carota HOM05D000076 ORTHO05D001377 9.6e-08 60.5 43 65.1
FvH4_2g18700 Fragaria vesca HOM05D001595 ORTHO05D001573 9.6e-08 60.5 43 65.1
FvH4_2g18870 Fragaria vesca HOM05D001595 ORTHO05D001573 9.6e-08 60.5 43 65.1
FAN15G0477 Fragaria x ananassa HOM05D001595 ORTHO05D001573 9.6e-08 60.5 43 65.1
FAN24G2361 Fragaria x ananassa HOM05D001595 ORTHO05D001573 9.6e-08 60.5 43 65.1
FAN27G1121 Fragaria x ananassa HOM05D001595 ORTHO05D001573 9.6e-08 60.5 43 65.1
Prupe.8G031900 Prunus persica HOM05D001595 ORTHO05D001573 9.6e-08 60.5 65 47.7
PGR044G0324 Punica granatum HOM05D001595 ORTHO05D001573 9.6e-08 60.5 61 49.2
SGA_v2.0_scaffold4G02142 Striga asiatica HOM05D001595 ORTHO05D001573 9.6e-08 60.5 66 45.5
Duzib116G0136 Durio zibethinus HOM05D001595 ORTHO05D001573 1.3e-07 60.1 37 64.9
Duzib235G1226 Durio zibethinus HOM05D001595 ORTHO05D001573 1.3e-07 60.1 38 63.2
MELO3C004902.2 Cucumis melo HOM05D001595 ORTHO05D001573 1.6e-07 59.7 40 65.0
FAN27G3279 Fragaria x ananassa HOM05D001595 ORTHO05D001573 1.6e-07 59.7 48 62.5
Lj4P858T30 Lonicera japonica HOM05D001595 ORTHO05D001573 1.6e-07 59.7 59 55.9
Nitab4.5_0001582g0120 Nicotiana tabacum HOM05D001595 ORTHO05D001573 1.6e-07 59.7 51 60.8
CAN.G516.7 Capsicum annuum HOM05D001595 ORTHO05D001573 2.1e-07 59.3 52 59.6
Cpa.g.sc49.104 Carica papaya HOM05D001595 ORTHO05D001573 3.6e-07 58.5 51 64.7
FAN04G2420 Fragaria x ananassa HOM05D001595 ORTHO05D001573 3.6e-07 58.5 54 50.0
FAN15G0384 Fragaria x ananassa HOM05D001595 ORTHO05D001573 3.6e-07 58.5 43 62.8
Lj3g0006531 Lotus japonicus HOM05D001595 ORTHO05D001573 3.6e-07 58.5 48 58.3
RcHm_v2.0_Chr6g0284691 Rosa chinensis HOM05D001595 ORTHO05D001573 3.6e-07 58.5 43 62.8
FvH4_5g02500 Fragaria vesca HOM05D001595 ORTHO05D001573 4.8e-07 58.2 64 43.8
FAN13G2138 Fragaria x ananassa HOM05D001595 ORTHO05D001573 4.8e-07 58.2 54 50.0
FAN18G2357 Fragaria x ananassa HOM05D002706 ORTHO05D003253 4.8e-07 58.2 64 43.8
CsaV3_1G013940 Cucumis sativus L. HOM05D001595 ORTHO05D001573 6.2e-07 57.8 38 63.2
Prupe.8G032300 Prunus persica HOM05D001595 ORTHO05D001573 6.2e-07 57.8 65 47.7
Prupe.I003300 Prunus persica HOM05D001595 ORTHO05D001573 6.2e-07 57.8 37 64.9
PGSC0003DMG400003995 Solanum tuberosum HOM05D001595 ORTHO05D001573 6.2e-07 57.8 54 57.4
ECA248G2798 Erigeron canadensis HOM05D001595 ORTHO05D001573 8.1e-07 57.4 52 55.8
Psat0s3756g0040 Pisum sativum HOM05D001595 ORTHO05D001573 8.1e-07 57.4 59 44.1
QL10p018379 Quercus lobata HOM05D001595 ORTHO05D001573 8.1e-07 57.4 47 59.6
QL10p018395 Quercus lobata HOM05D001595 ORTHO05D001573 8.1e-07 57.4 47 59.6
Cfa002804 Carpinus fangiana HOM05D001595 ORTHO05D001573 1.1e-06 57.0 57 50.9
PSO063G2756 Papaver somniferum HOM05D001595 ORTHO05D001573 1.1e-06 57.0 73 39.7
RcHm_v2.0_Chr6g0284701 Rosa chinensis HOM05D001595 ORTHO05D001573 1.1e-06 57.0 64 46.9
THA.LOC104812034 Tarenaya hassleriana HOM05D001595 ORTHO05D001573 1.1e-06 57.0 73 38.4
THA.LOC109116006 Tarenaya hassleriana HOM05D001595 ORTHO05D001573 1.1e-06 57.0 73 38.4
Cpa.g.sc49.105 Carica papaya HOM05D001595 ORTHO05D001573 1.4e-06 56.6 38 63.2
MELO3C004901.2 Cucumis melo HOM05D001595 ORTHO05D001573 1.4e-06 56.6 39 64.1
Migut.L00051 Erythranthe guttata HOM05D001595 ORTHO05D001573 1.4e-06 56.6 50 54.0
FAN08G1743 Fragaria x ananassa HOM05D001595 ORTHO05D001573 1.4e-06 56.6 54 48.1
Lj6g0008981 Lotus japonicus HOM05D001595 ORTHO05D001573 1.4e-06 56.6 46 54.3
Prupe.8G034300 Prunus persica HOM05D001595 ORTHO05D001573 1.4e-06 56.6 65 46.2
TAR381G0734 Trochodendron aralioides HOM05D001595 ORTHO05D001573 1.4e-06 56.6 45 55.6
TAR381G0944 Trochodendron aralioides HOM05D001595 ORTHO05D001573 1.4e-06 56.6 45 55.6
FAN20G0442 Fragaria x ananassa HOM05D001595 ORTHO05D001573 1.8e-06 56.2 69 42.0
Rhsim10G0143700 Rhododendron simsii HOM05D001595 ORTHO05D001573 1.8e-06 56.2 50 58.0
Carub.0002s2366 Capsella rubella HOM05D001595 ORTHO05D001573 2.4e-06 55.8 66 42.4
SHI25104 Sapria himalayana HOM05D009506 ORTHO05D001573 2.4e-06 55.8 59 54.2
Sed0014305 Sechium edule HOM05D001595 ORTHO05D001573 2.4e-06 55.8 37 62.2
TPR.G36297 Trifolium pratense HOM05D001595 ORTHO05D001573 2.4e-06 55.8 48 54.2
TWI60G0213 Tripterygium wilfordii HOM05D001595 ORTHO05D001573 2.4e-06 55.8 48 62.5
Glyma.20G168300 Glycine max HOM05D001595 ORTHO05D001573 3.1e-06 55.5 57 43.9
Lj6g0002778 Lotus japonicus HOM05D001595 ORTHO05D001573 3.1e-06 55.5 46 50.0
MBI17_g24664_MAGBIO Magnolia biondii HOM05D001595 ORTHO05D001573 3.1e-06 55.5 49 55.1
MBI19_g47477_MAGBIO Magnolia biondii HOM05D001595 ORTHO05D001573 3.1e-06 55.5 63 47.6
BcaC08g45511 Brassica carinata HOM05D001595 ORTHO05D001573 4.0e-06 55.1 71 42.3
C06p31810 Brassica napus HOM05D001595 ORTHO05D001573 4.0e-06 55.1 71 42.3
BolC6t38309H Brassica oleracea HOM05D001595 ORTHO05D001573 4.0e-06 55.1 71 42.3
CiPaw.16G010800 Carya illinoinensis HOM05D001595 ORTHO05D001573 4.0e-06 55.1 54 50.0
FAN15G2959 Fragaria x ananassa HOM05D001595 ORTHO05D001573 4.0e-06 55.1 69 40.6
Glyma.06G199900 Glycine max HOM05D001595 ORTHO05D001573 4.0e-06 55.1 56 50.0
Gohir.A05G270700 Gossypium hirsutum HOM05D001595 ORTHO05D001573 4.0e-06 55.1 48 52.1
Gorai.009G285800 Gossypium raimondii HOM05D001595 ORTHO05D001573 4.0e-06 55.1 48 52.1
Lj2P586T19 Lonicera japonica HOM05D001595 ORTHO05D001573 4.0e-06 55.1 84 39.3
Solyc11g005500.1 Solanum lycopersicum HOM05D001595 ORTHO05D001573 4.0e-06 55.1 54 55.6
A07p28370 Brassica napus HOM05D001595 ORTHO05D001573 5.3e-06 54.7 75 41.3
BraA07t30473Z Brassica rapa HOM05D001595 ORTHO05D001573 5.3e-06 54.7 75 41.3
Ca_16909_v3 Cicer arietinum L. HOM05D001595 ORTHO05D001573 5.3e-06 54.7 45 55.6
Rhsim08G0004100 Rhododendron simsii HOM05D001595 ORTHO05D001573 5.3e-06 54.7 60 51.7
RcHm_v2.0_Chr6g0274951 Rosa chinensis HOM05D001595 ORTHO05D001573 5.3e-06 54.7 43 53.5
Sed0004907 Sechium edule HOM05D001595 ORTHO05D001573 5.3e-06 54.7 47 53.2
Sed0013155 Sechium edule HOM05D001595 ORTHO05D001573 5.3e-06 54.7 37 59.5
TPR.G858 Trifolium pratense HOM05D001595 ORTHO05D001573 5.3e-06 54.7 41 53.7
Aa31LG4G6820 Aethionema arabicum HOM05D001595 ORTHO05D001573 6.9e-06 54.3 68 38.2
AT1G76750 Arabidopsis thaliana HOM05D001595 ORTHO05D001573 6.9e-06 54.3 38 60.5
FvH4_2g13390 Fragaria vesca HOM05D001595 ORTHO05D001573 6.9e-06 54.3 37 59.5
FvH4_2g13400 Fragaria vesca HOM05D001595 ORTHO05D001573 6.9e-06 54.3 37 59.5
FAN24G0780 Fragaria x ananassa HOM05D001595 ORTHO05D001573 6.9e-06 54.3 37 59.5
Glyma.09G195200 Glycine max HOM05D001595 ORTHO05D001573 6.9e-06 54.3 64 45.3
Gohir.D05G272700 Gossypium hirsutum HOM05D001595 ORTHO05D001573 6.9e-06 54.3 48 50.0
MBI16_g15525_MAGBIO Magnolia biondii HOM05D001595 ORTHO05D001573 6.9e-06 54.3 49 53.1
RcHm_v2.0_Chr7g0197601 Rosa chinensis HOM05D001595 ORTHO05D001573 6.9e-06 54.3 37 62.2
AL2G36900 Arabidopsis lyrata HOM05D001595 ORTHO05D001573 9.0e-06 53.9 66 42.4
CDE06G0846 Ceratophyllum demersum HOM05D001595 ORTHO05D001573 9.0e-06 53.9 48 54.2
Haze_17770 Corylus avellana HOM05D001595 ORTHO05D001573 9.0e-06 53.9 60 50.0
DCAR_001408 Daucus carota HOM05D001595 ORTHO05D001573 9.0e-06 53.9 48 58.3
FvH4_2g18910 Fragaria vesca HOM05D001595 ORTHO05D001573 9.0e-06 53.9 42 50.0
FAN24G1415 Fragaria x ananassa HOM05D001595 ORTHO05D001573 9.0e-06 53.9 42 50.0
Glyma.04G164700 Glycine max HOM05D001595 ORTHO05D001573 9.0e-06 53.9 56 50.0
MBI17_g24511_MAGBIO Magnolia biondii HOM05D001595 ORTHO05D001573 9.0e-06 53.9 49 53.1
MBI18_g10388_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 9.0e-06 53.9 61 45.9


User provided reference genes

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