Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G077700 Populus trichocarpa HOM05D009852 ORTHO05D009761 3.4e-174 615.1 372 100.0
Sabra11G0072300 Salix brachista HOM05D009852 ORTHO05D009761 6.1e-115 418.3 400 66.5
Potri.001G354600 Populus trichocarpa HOM05D009852 ORTHO05D009761 1.0e-98 364.4 372 67.7
Sabra16G0233200 Salix brachista HOM05D009852 ORTHO05D009761 2.8e-83 313.2 383 58.0
Manes.15G116600 Manihot esculenta HOM05D009852 ORTHO05D009761 1.9e-52 210.7 412 41.0
CiPaw.10G096600 Carya illinoinensis HOM05D009013 ORTHO05D009761 2.6e-41 173.7 376 38.0
Manes.17G064400 Manihot esculenta HOM05D009852 ORTHO05D009761 2.6e-41 173.7 428 38.1
TWI73G0525 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 1.7e-40 171.0 374 35.8
Ciclev10017480m.g Citrus clementina HOM05D009852 ORTHO05D009761 2.5e-39 167.2 376 40.4
TWI09G1113 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 3.9e-37 159.8 376 37.5
TWI09G0214 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 1.5e-36 157.9 376 37.2
Dinv03635 Davidia involucrata HOM05D009013 ORTHO05D009761 3.7e-35 153.3 386 38.9
QL05p060720 Quercus lobata HOM05D009013 ORTHO05D009761 2.4e-34 150.6 390 37.4
Haze_05479 Corylus avellana HOM05D009013 ORTHO05D009761 2.9e-32 143.7 376 36.7
Atru.chr10.1414 Acer truncatum HOM05D009852 ORTHO05D009761 1.6e-30 137.9 346 41.3
Duzib160G0535 Durio zibethinus HOM05D009852 ORTHO05D009761 7.9e-30 135.6 376 35.6
Duzib192G0106 Durio zibethinus HOM05D009852 ORTHO05D009761 1.0e-29 135.2 374 36.4
Thecc.06G158200 Theobroma cacao HOM05D009852 ORTHO05D009761 3.3e-28 130.2 382 33.2
Gorai.010G164100 Gossypium raimondii HOM05D009852 ORTHO05D009761 6.9e-26 122.5 374 35.3
Gohir.D06G140600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 9.1e-26 122.1 374 35.6
Gorai.009G158300 Gossypium raimondii HOM05D009852 ORTHO05D009761 5.9e-25 119.4 374 34.0
Duzib235G1088 Durio zibethinus HOM05D009852 ORTHO05D009761 1.0e-24 118.6 434 30.9
Cfa001036 Carpinus fangiana HOM05D009013 ORTHO05D009761 1.3e-24 118.2 373 34.6
Gohir.D05G154000 Gossypium hirsutum HOM05D009852 ORTHO05D009761 1.7e-24 117.9 374 33.7
CiPaw.09G129900 Carya illinoinensis HOM05D009013 ORTHO05D009761 2.5e-23 114.0 248 40.3
Gohir.A06G135400 Gossypium hirsutum HOM05D009852 ORTHO05D009761 1.2e-22 111.7 330 36.1
Lalb_Chr12g0204801 Lupinus albus HOM05D009013 ORTHO05D009761 4.7e-22 109.8 376 32.4
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 5.2e-21 106.3 374 31.8
Lj4g0005206 Lotus japonicus HOM05D009013 ORTHO05D009761 2.0e-20 104.4 379 30.6
Gohir.A05G151600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 1.8e-18 97.8 373 31.1
Glyma.09G085700 Glycine max HOM05D009013 ORTHO05D009761 3.1e-18 97.1 376 31.4
Prupe.4G073200 Prunus persica HOM05D014736 ORTHO05D009761 5.3e-18 96.3 376 30.3
COL.COLO4_22804 Corchorus olitorius HOM05D009852 ORTHO05D009761 7.0e-18 95.9 343 34.4
Phvul.002G244200 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 1.7e-16 91.3 374 29.9
Lalb_Chr07g0186121 Lupinus albus HOM05D009013 ORTHO05D009761 2.9e-16 90.5 379 30.9
CSS0047309 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 1.1e-15 88.6 443 27.8
VMungo1309G2255 Vigna mungo HOM05D009013 ORTHO05D009761 1.9e-15 87.8 373 29.0
CSS0045433 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 2.5e-15 87.4 480 28.5
VMungo0251G0903 Vigna mungo HOM05D009013 ORTHO05D009761 2.5e-15 87.4 377 31.0
Glyma.15G195700 Glycine max HOM05D009013 ORTHO05D009761 2.7e-14 84.0 379 31.7
Dinv32301 Davidia involucrata HOM05D009013 ORTHO05D009761 6.1e-14 82.8 266 38.3
Lalb_Chr23g0275971 Lupinus albus HOM05D009013 ORTHO05D009761 1.0e-13 82.0 376 28.5
Glyma.08G121600 Glycine max HOM05D009013 ORTHO05D009761 1.4e-13 81.6 378 28.0
DCAR_003953 Daucus carota HOM05D009013 ORTHO05D009761 3.0e-13 80.5 382 27.0
Oeu046855.1 Olea europaea HOM05D012266 ORTHO05D011876 6.7e-13 79.3 380 27.1
TAR624G0539 Trochodendron aralioides HOM05D041535 ORTHO05D009761 2.6e-12 77.4 279 33.3
Hma1.2p1_0015F.1_g010420 Hydrangea macrophylla HOM05D009013 ORTHO05D009761 9.7e-12 75.5 359 30.9
Lalb_Chr13g0295461 Lupinus albus HOM05D009013 ORTHO05D009761 1.3e-11 75.1 320 26.9
Glyma.05G164200 Glycine max HOM05D009013 ORTHO05D009761 2.8e-11 73.9 375 28.3
CANSAT35G0309 Cannabis sativa HOM05D009013 ORTHO05D009761 6.3e-11 72.8 374 28.9
Lj6g0000102 Lotus japonicus HOM05D009013 ORTHO05D009761 8.2e-11 72.4 401 29.9
Eucgr.D00345 Eucalyptus grandis HOM05D014736 ORTHO05D009761 2.7e-09 67.4 64 50.0
Oeu021526.1 Olea europaea HOM05D012266 ORTHO05D011876 4.5e-09 66.6 376 24.5
Psat1g018200 Pisum sativum HOM05D009013 ORTHO05D009761 1.0e-08 65.5 375 25.3
MELO3C002700.2 Cucumis melo HOM05D025335 ORTHO05D025087 1.7e-08 64.7 380 27.4
FAN11G2258 Fragaria x ananassa HOM05D014736 ORTHO05D009761 2.2e-08 64.3 160 31.2
CsaV3_1G032810 Cucumis sativus L. HOM05D025335 ORTHO05D025087 2.9e-08 63.9 391 27.6
MD05G1292200 Malus domestica HOM05D014736 ORTHO05D009761 3.8e-08 63.5 175 28.6
FvH4_3g06440 Fragaria vesca HOM05D014736 ORTHO05D009761 6.5e-08 62.8 150 32.7
MD10G1268000 Malus domestica HOM05D014736 ORTHO05D009761 6.5e-08 62.8 287 29.3
Psat1g020440 Pisum sativum HOM05D009013 ORTHO05D009761 8.5e-08 62.4 53 49.1
Rhsim02G0193600 Rhododendron simsii HOM05D014645 ORTHO05D009761 1.1e-07 62.0 378 26.7
Glyma.13G051300 Glycine max HOM05D009013 ORTHO05D009761 1.9e-07 61.2 54 53.7
Lalb_Chr08g0233301 Lupinus albus HOM05D009013 ORTHO05D009761 5.5e-07 59.7 374 26.7
THA.LOC104806111 Tarenaya hassleriana HOM05D010784 ORTHO05D012957 5.5e-07 59.7 400 28.0
EL10Ac8g19799 Beta vulgaris HOM05D018558 ORTHO05D018254 7.2e-07 59.3 371 29.1
TAR627G0709 Trochodendron aralioides HOM05D041535 ORTHO05D030214 9.4e-07 58.9 215 26.0
Sed0006555 Sechium edule HOM05D022667 ORTHO05D009761 1.2e-06 58.5 374 29.9
Cpa.g.sc17.167 Carica papaya HOM05D009852 ORTHO05D009761 3.6e-06 57.0 75 49.3
Actinidia07666 Actinidia chinensis HOM05D014645 ORTHO05D009761 6.1e-06 56.2 146 32.9
ClCG01G024180 Citrullus lanatus HOM05D022667 ORTHO05D009761 8.0e-06 55.8 373 26.5


User provided reference genes

Program Settings