Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G074100 Populus trichocarpa HOM05D001966 ORTHO05D010449 1.2e-28 129.0 60 100.0
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 1.0e-27 125.9 60 96.7
BcaNung01515 Brassica carinata HOM05D001966 ORTHO05D010449 1.0e-27 125.9 60 96.7
BraSC138t45527Z Brassica rapa HOM05D001966 ORTHO05D010449 1.0e-27 125.9 60 96.7
BraSC25t45919Z Brassica rapa HOM05D001966 ORTHO05D010449 1.0e-27 125.9 60 96.7
BraSC59t46542Z Brassica rapa HOM05D001966 ORTHO05D010449 1.0e-27 125.9 60 96.7
Cpa.g.c43052.2 Carica papaya HOM05D001966 ORTHO05D010449 1.0e-27 125.9 60 96.7
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 1.3e-27 125.6 59 96.6
Gohir.A05G323716 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.9e-27 124.4 60 95.0
Gohir.A09G102700 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.9e-27 124.4 60 95.0
Nn029s41585 Nelumbo nucifera HOM05D001966 ORTHO05D010449 6.6e-27 123.2 60 95.0
Nn064s42222 Nelumbo nucifera HOM05D001966 ORTHO05D010449 6.6e-27 123.2 60 95.0
Nn212s45202 Nelumbo nucifera HOM05D001966 ORTHO05D010449 6.6e-27 123.2 60 95.0
Nn264s45946 Nelumbo nucifera HOM05D001966 ORTHO05D010449 6.6e-27 123.2 60 95.0
arahy.Tifrunner.gnm1.ann1.818UAU Arachis hypogaea HOM05D001966 ORTHO05D010449 8.6e-27 122.9 60 95.0
Cpa.g.c38922 Carica papaya HOM05D001966 ORTHO05D010449 1.5e-26 122.1 60 93.3
Nn8g40933 Nelumbo nucifera HOM05D001966 ORTHO05D010449 4.3e-26 120.6 60 93.3
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 7.3e-26 119.8 57 94.7
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 7.3e-26 119.8 60 93.3
Hma1.2p1_0642F.1_g194360 Hydrangea macrophylla HOM05D001966 ORTHO05D010449 1.6e-25 118.6 60 90.0
FAN06G1313 Fragaria x ananassa HOM05D001966 ORTHO05D010449 3.6e-25 117.5 60 91.7
EL10Ac8g19703 Beta vulgaris HOM05D001966 ORTHO05D010449 8.0e-25 116.3 60 90.0
Lj3g0016717 Lotus japonicus HOM05D001966 ORTHO05D010449 1.0e-24 115.9 60 91.7
Gohir.A10G065960 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.8e-24 115.2 60 90.0
Gohir.A09G034500 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.3e-24 114.8 58 91.4
Ca_03784_v3 Cicer arietinum L. HOM05D001966 ORTHO05D010449 3.1e-24 114.4 59 89.8
Phvul.006G154100 Phaseolus vulgaris HOM05D001966 ORTHO05D010449 3.1e-24 114.4 60 90.0
Gohir.D12G084201 Gossypium hirsutum HOM05D001966 ORTHO05D010449 8.9e-24 112.8 60 88.3
Gorai.008G094200 Gossypium raimondii HOM05D001966 ORTHO05D010449 1.5e-23 112.1 60 86.7
arahy.Tifrunner.gnm1.ann1.11UFCR Arachis hypogaea HOM05D001966 ORTHO05D010449 4.9e-22 107.1 59 83.1
Gohir.A02G069600 Gossypium hirsutum HOM05D001966 ORTHO05D010449 4.9e-22 107.1 59 84.7
Gohir.A06G105700 Gossypium hirsutum HOM05D001966 ORTHO05D010449 3.2e-21 104.4 60 80.0
Glyma.08G269900 Glycine max HOM05D001966 ORTHO05D010449 1.6e-20 102.1 60 80.0
SHI36541 Sapria himalayana HOM05D001966 ORTHO05D010449 2.7e-20 101.3 51 88.2
Gohir.D02G173601 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.3e-19 99.0 58 81.0
Hma1.2p1_0236F.1_g099130 Hydrangea macrophylla HOM05D001966 ORTHO05D010449 1.3e-19 99.0 50 88.0
Gorai.006G234500 Gossypium raimondii HOM05D001966 ORTHO05D010449 3.9e-19 97.4 51 88.2
Phvul.002G203800 Phaseolus vulgaris HOM05D001966 ORTHO05D010449 5.2e-16 87.0 43 90.7
Gohir.D09G072950 Gossypium hirsutum HOM05D001966 ORTHO05D010449 7.5e-15 83.2 41 87.8
arahy.Tifrunner.gnm1.ann1.A6TYH4 Arachis hypogaea HOM05D001966 ORTHO05D010449 1.7e-14 82.0 38 92.1
arahy.Tifrunner.gnm1.ann1.EPN6WV Arachis hypogaea HOM05D001966 ORTHO05D010449 1.7e-14 82.0 38 92.1
Gorai.007G250500 Gossypium raimondii HOM05D001966 ORTHO05D010449 3.7e-14 80.9 44 81.8
TPR.G18587 Trifolium pratense HOM05D001966 ORTHO05D010449 4.9e-14 80.5 41 85.4
Gohir.D11G237220 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.9e-13 78.6 41 85.4
A02p28440 Brassica napus HOM05D001966 ORTHO05D010449 1.2e-12 75.9 56 60.7
BraA02t07879Z Brassica rapa HOM05D001966 ORTHO05D010449 1.2e-12 75.9 56 60.7
LjContig00319g0014927 Lotus japonicus HOM05D001966 ORTHO05D007227 1.3e-11 72.4 38 86.8
Aqoxy4G03063 Aquilegia oxysepala HOM05D000710 ORTHO05D010449 3.0e-11 71.2 39 82.1
Lj4g0021959 Lotus japonicus HOM05D008259 ORTHO05D010449 3.3e-10 67.8 38 81.6
SHI23682 Sapria himalayana HOM05D001966 ORTHO05D010449 3.3e-10 67.8 31 90.3
arahy.Tifrunner.gnm1.ann1.PU3CYV Arachis hypogaea HOM05D001966 ORTHO05D010449 4.3e-10 67.4 45 64.4
Psat0s1116g0080 Pisum sativum HOM05D004182 ORTHO05D007321 7.3e-10 66.6 32 90.6
Gohir.D02G151976 Gossypium hirsutum HOM05D001966 ORTHO05D010449 9.5e-10 66.2 37 83.8
BraSC143t45650Z Brassica rapa HOM05D001966 ORTHO05D010449 2.1e-09 65.1 33 87.9
Psat4g168320 Pisum sativum HOM05D004182 ORTHO05D007321 1.4e-08 62.4 31 87.1
BraSC58t46454Z Brassica rapa HOM05D001966 ORTHO05D010449 3.1e-08 61.2 35 74.3
Psat5g167880 Pisum sativum HOM05D000009 ORTHO05D000008 3.1e-08 61.2 31 87.1
EL10As15g24132 Beta vulgaris HOM05D008259 ORTHO05D010449 1.2e-07 59.3 38 78.9
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 1.2e-07 59.3 38 78.9
FAN26G2239 Fragaria x ananassa HOM05D004182 ORTHO05D010449 1.2e-07 59.3 38 78.9
Sopen02g009080 Solanum pennellii HOM05D004182 ORTHO05D007321 1.2e-07 59.3 38 78.9
DCAR_029424 Daucus carota HOM05D001966 ORTHO05D010449 1.5e-07 58.9 38 68.4


User provided reference genes

Program Settings