Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G074067 Populus trichocarpa HOM05D001966 ORTHO05D011119 7.6e-38 159.8 72 100.0
ScUNg0000270 Simmondsia chinensis HOM05D001966 ORTHO05D011119 3.2e-36 154.5 72 97.2
Cfa023003 Carpinus fangiana HOM05D001966 ORTHO05D011119 7.9e-35 149.8 72 95.8
CDE02G3054 Ceratophyllum demersum HOM05D001966 ORTHO05D011119 7.9e-35 149.8 72 95.8
Gohir.1Z049692 Gossypium hirsutum HOM05D001966 ORTHO05D011119 7.9e-35 149.8 72 95.8
Gohir.1Z050866 Gossypium hirsutum HOM05D001966 ORTHO05D011119 7.9e-35 149.8 72 95.8
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 1.0e-34 149.4 72 94.4
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 1.3e-34 149.1 72 93.1
arahy.Tifrunner.gnm1.ann1.9XT8BN Arachis hypogaea HOM05D001966 ORTHO05D010127 3.0e-34 147.9 72 94.4
arahy.Tifrunner.gnm1.ann1.H5WC3R Arachis hypogaea HOM05D001966 ORTHO05D011119 3.0e-34 147.9 72 94.4
Gohir.A01G119800 Gossypium hirsutum HOM05D001966 ORTHO05D011119 6.7e-34 146.7 72 94.4
Gohir.A10G178000 Gossypium hirsutum HOM05D001966 ORTHO05D011119 5.6e-33 143.7 72 91.7
Hma1.2p1_0051F.1_g029255 Hydrangea macrophylla HOM05D001966 ORTHO05D011119 1.3e-32 142.5 72 90.3
arahy.Tifrunner.gnm1.ann1.KT8FLV Arachis hypogaea HOM05D001966 ORTHO05D011119 2.8e-32 141.4 72 90.3
Gorai.007G237900 Gossypium raimondii HOM05D001966 ORTHO05D011119 4.8e-32 140.6 72 90.3
arahy.Tifrunner.gnm1.ann1.2KV113 Arachis hypogaea HOM05D000580 ORTHO05D011119 1.4e-31 139.0 72 88.9
SEGI_31611 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 2.0e-30 135.2 72 88.9
Phvul.001G037800 Phaseolus vulgaris HOM05D001966 ORTHO05D011119 3.4e-30 134.4 72 86.1
Gohir.D05G230250 Gossypium hirsutum HOM05D001966 ORTHO05D011119 1.0e-29 132.9 72 83.3
arahy.Tifrunner.gnm1.ann1.1DF8CR Arachis hypogaea HOM05D001966 ORTHO05D011119 1.7e-29 132.1 65 93.8
arahy.Tifrunner.gnm1.ann1.KXW2A6 Arachis hypogaea HOM05D001966 ORTHO05D011119 1.7e-29 132.1 68 91.2
Gohir.A05G366050 Gossypium hirsutum HOM05D001966 ORTHO05D011119 1.9e-28 128.6 70 84.3
Oeu022559.1 Olea europaea HOM05D001966 ORTHO05D011119 5.5e-28 127.1 70 81.4
Glyma.11G218300 Glycine max HOM05D001966 ORTHO05D011119 1.0e-26 122.9 82 75.6
SEGI_24666 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 3.9e-26 120.9 72 81.9
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 2.5e-25 118.2 59 93.2
BcaNung07086 Brassica carinata HOM05D001966 ORTHO05D011119 3.3e-25 117.9 58 94.8
Sopen09g027020 Solanum pennellii HOM05D001966 ORTHO05D011119 3.3e-25 117.9 58 94.8
arahy.Tifrunner.gnm1.ann1.FF8QKQ Arachis hypogaea HOM05D001966 ORTHO05D011119 4.3e-25 117.5 75 78.7
Gohir.A04G110920 Gossypium hirsutum HOM05D001966 ORTHO05D011119 1.2e-22 109.4 72 72.2
Gohir.A04G110980 Gossypium hirsutum HOM05D001966 ORTHO05D011119 1.2e-22 109.4 72 72.2
Manes.13G063850 Manihot esculenta HOM05D001966 ORTHO05D011119 1.2e-22 109.4 73 72.6
TPR.G40147 Trifolium pratense HOM05D003168 ORTHO05D011119 1.0e-21 106.3 70 71.4
Nitab4.5_0003644g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 2.9e-21 104.8 60 80.0
Sc09g0006250 Simmondsia chinensis HOM05D002578 ORTHO05D005154 8.4e-21 103.2 59 84.7
Sopen02g002730 Solanum pennellii HOM05D004182 ORTHO05D007321 4.2e-20 100.9 58 84.5
ECA246G3863 Erigeron canadensis HOM05D002697 ORTHO05D003087 4.6e-19 97.4 47 93.6
arahy.Tifrunner.gnm1.ann1.CV40CV Arachis hypogaea HOM05D001966 ORTHO05D010127 1.3e-18 95.9 50 92.0
Gohir.D02G156751 Gossypium hirsutum HOM05D001966 ORTHO05D011119 5.1e-18 94.0 50 90.0
Gorai.005G175800 Gossypium raimondii HOM05D001966 ORTHO05D011119 8.7e-18 93.2 50 90.0
arahy.Tifrunner.gnm1.ann1.MHEL4J Arachis hypogaea HOM05D001966 ORTHO05D011119 2.8e-16 88.2 49 91.8
arahy.Tifrunner.gnm1.ann1.VLT00F Arachis hypogaea HOM05D001966 ORTHO05D011119 1.1e-15 86.3 45 91.1
Sc05g0009610 Simmondsia chinensis HOM05D001966 ORTHO05D011119 1.2e-14 82.8 42 92.9
Nitab4.5_0000289g0040 Nicotiana tabacum HOM05D001966 ORTHO05D011119 2.6e-14 81.6 47 74.5
Oeu012760.1 Olea europaea HOM05D001966 ORTHO05D010127 1.7e-13 79.0 50 76.0
Sopen04g018020 Solanum pennellii HOM05D001966 ORTHO05D011119 5.1e-10 67.4 44 79.5
Nitab4.5_0003550g0060 Nicotiana tabacum HOM05D001966 ORTHO05D011119 3.1e-07 58.2 23 95.7


User provided reference genes

Program Settings