Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G074033 Populus trichocarpa HOM05D000963 ORTHO05D004715 3.3e-58 228.0 106 100.0
Lsat_1_v5_gn_1_88180 Lactuca sativa HOM05D000963 ORTHO05D004715 1.1e-56 223.0 106 98.1
Lsat_1_v5_gn_2_97121 Lactuca sativa HOM05D000963 ORTHO05D004715 1.1e-56 223.0 106 98.1
Lsat_1_v5_gn_9_121741 Lactuca sativa HOM05D000963 ORTHO05D004715 1.1e-56 223.0 106 98.1
Sed0014585 Sechium edule HOM05D000963 ORTHO05D004715 1.1e-56 223.0 106 98.1
QL10p017079 Quercus lobata HOM05D000963 ORTHO05D004715 1.4e-56 222.6 105 98.1
QL93p0141_0026 Quercus lobata HOM05D000963 ORTHO05D004715 1.4e-56 222.6 105 98.1
Migut.D01391 Erythranthe guttata HOM05D000963 ORTHO05D004715 2.4e-56 221.9 106 97.2
Atru.chr1.3576 Acer truncatum HOM05D000963 ORTHO05D004715 3.1e-56 221.5 106 97.2
Lsat_1_v5_gn_8_139840 Lactuca sativa HOM05D000963 ORTHO05D004715 5.3e-56 220.7 106 97.2
AL9U11970 Arabidopsis lyrata HOM05D000963 ORTHO05D004715 2.0e-55 218.8 106 96.2
C09p40280 Brassica napus HOM05D000963 ORTHO05D004715 2.0e-55 218.8 106 96.2
BolSC44t60816H Brassica oleracea HOM05D000963 ORTHO05D004715 2.0e-55 218.8 106 96.2
BolSC44t60829H Brassica oleracea HOM05D000963 ORTHO05D004715 2.0e-55 218.8 106 96.2
BolSC49t61135H Brassica oleracea HOM05D000963 ORTHO05D004715 2.0e-55 218.8 106 96.2
BraSC103t45422Z Brassica rapa HOM05D000963 ORTHO05D004715 2.0e-55 218.8 106 96.2
BraSC103t45433Z Brassica rapa HOM05D000963 ORTHO05D004715 2.0e-55 218.8 106 96.2
BraSC138t45541Z Brassica rapa HOM05D000963 ORTHO05D004715 2.0e-55 218.8 106 96.2
BraSC25t45904Z Brassica rapa HOM05D000963 ORTHO05D004715 2.0e-55 218.8 106 96.2
BraSC25t45917Z Brassica rapa HOM05D000963 ORTHO05D004715 2.0e-55 218.8 106 96.2
QL93p0141_0000 Quercus lobata HOM05D000963 ORTHO05D004715 2.7e-55 218.4 105 96.2
Sopen06g015060 Solanum pennellii HOM05D000963 ORTHO05D004715 5.9e-55 217.2 107 96.3
PGSC0003DMG400034831 Solanum tuberosum HOM05D000963 ORTHO05D004715 5.9e-55 217.2 107 96.3
COL.COLO4_02154 Corchorus olitorius HOM05D000963 ORTHO05D004715 1.0e-54 216.5 106 95.3
Aqoxy38s008 Aquilegia oxysepala HOM05D000963 ORTHO05D004715 1.3e-54 216.1 106 95.3
BolSC29t60541H Brassica oleracea HOM05D000963 ORTHO05D004715 2.2e-54 215.3 106 94.3
FvH4_c3g00050 Fragaria vesca HOM05D000963 ORTHO05D004715 2.2e-54 215.3 106 95.3
BolSC37t60787H Brassica oleracea HOM05D000963 ORTHO05D004715 5.0e-54 214.2 107 95.3
BolC9t56918H Brassica oleracea HOM05D000963 ORTHO05D004715 8.5e-54 213.4 106 94.3
BolSC45t60916H Brassica oleracea HOM05D000963 ORTHO05D004715 1.5e-53 212.6 102 96.1
BraSC59t46533Z Brassica rapa HOM05D000963 ORTHO05D004715 3.2e-53 211.5 106 92.5
Gohir.1Z049781 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.5e-53 210.7 106 93.4
CAN.G929.1 Capsicum annuum HOM05D000963 ORTHO05D004715 7.2e-53 210.3 107 93.5
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 9.4e-53 209.9 105 93.3
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 9.4e-53 209.9 103 94.2
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 9.4e-53 209.9 103 94.2
CAN.G1298.20 Capsicum annuum HOM05D000963 ORTHO05D004715 2.1e-52 208.8 107 92.5
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.7e-52 208.4 102 94.1
Gohir.A07G151200 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.7e-52 208.4 106 92.5
Gohir.A04G057626 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.1e-52 207.2 106 90.6
Gohir.D04G096676 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.1e-52 207.2 106 90.6
Sed0012027 Sechium edule HOM05D000963 ORTHO05D004715 1.8e-51 205.7 106 92.5
HPP92_028430 Vanilla planifolia HOM05D000963 ORTHO05D004715 3.4e-50 201.4 106 89.6
Gohir.D04G054150 Gossypium hirsutum HOM05D000963 ORTHO05D004715 7.5e-50 200.3 106 89.6
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.3e-49 199.5 97 92.8
CAN.G67.2 Capsicum annuum HOM05D000963 ORTHO05D004715 4.8e-49 197.6 119 83.2
Gohir.A05G286366 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.4e-48 196.1 101 92.1
CAN.G965.10 Capsicum annuum HOM05D000963 ORTHO05D004715 1.8e-48 195.7 107 89.7
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 1.8e-48 195.7 100 92.0
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 1.8e-48 195.7 100 92.0
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 4.1e-48 194.5 100 92.0
Sc01g0005720 Simmondsia chinensis HOM05D000963 ORTHO05D004715 5.4e-48 194.1 106 87.7
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 7.0e-48 193.7 92 97.8
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 7.0e-48 193.7 92 97.8
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 1.3e-46 189.5 104 83.7
BraSC143t45652Z Brassica rapa HOM05D000963 ORTHO05D004715 5.0e-46 187.6 107 85.0
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 8.5e-46 186.8 99 87.9
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 8.5e-46 186.8 99 87.9
DCAR_014935 Daucus carota HOM05D000963 ORTHO05D004715 1.9e-45 185.7 90 95.6
Nitab4.5_0008665g0030 Nicotiana tabacum HOM05D000963 ORTHO05D004715 9.5e-45 183.3 97 89.7
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 9.5e-45 183.3 99 86.9
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 9.5e-45 183.3 99 86.9
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 9.5e-45 183.3 99 86.9
BraSC58t46456Z Brassica rapa HOM05D000963 ORTHO05D004715 1.6e-44 182.6 88 95.5
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 2.1e-44 182.2 92 92.4
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 6.1e-44 180.6 104 83.7
arahy.Tifrunner.gnm1.ann1.0S9V2W Arachis hypogaea HOM05D000963 ORTHO05D004715 1.8e-43 179.1 90 93.3
arahy.Tifrunner.gnm1.ann1.56M0GV Arachis hypogaea HOM05D000963 ORTHO05D004715 1.8e-43 179.1 90 93.3
arahy.Tifrunner.gnm1.ann1.E29LBX Arachis hypogaea HOM05D000963 ORTHO05D004715 1.8e-43 179.1 90 93.3
arahy.Tifrunner.gnm1.ann1.NRNC1F Arachis hypogaea HOM05D000963 ORTHO05D004715 1.8e-43 179.1 90 93.3
arahy.Tifrunner.gnm1.ann1.PH4GL6 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.8e-43 179.1 90 93.3
arahy.Tifrunner.gnm1.ann1.RS9AFF Arachis hypogaea HOM05D000963 ORTHO05D004715 1.8e-43 179.1 90 93.3
arahy.Tifrunner.gnm1.ann1.TDDH8C Arachis hypogaea HOM05D000963 ORTHO05D004715 1.8e-43 179.1 90 93.3
arahy.Tifrunner.gnm1.ann1.UGP0DD Arachis hypogaea HOM05D000963 ORTHO05D004715 1.8e-43 179.1 90 93.3
arahy.Tifrunner.gnm1.ann1.WD30LQ Arachis hypogaea HOM05D000963 ORTHO05D004715 1.8e-43 179.1 90 93.3
arahy.Tifrunner.gnm1.ann1.ZA1EMG Arachis hypogaea HOM05D000963 ORTHO05D004715 1.8e-43 179.1 90 93.3
arahy.Tifrunner.gnm1.ann1.54C0KZ Arachis hypogaea HOM05D000963 ORTHO05D004715 5.2e-43 177.6 90 92.2
C09p39330 Brassica napus HOM05D000963 ORTHO05D004715 5.2e-43 177.6 106 82.1
arahy.Tifrunner.gnm1.ann1.WSE485 Arachis hypogaea HOM05D000963 ORTHO05D004715 8.8e-43 176.8 90 92.2
Gorai.012G060700 Gossypium raimondii HOM05D000963 ORTHO05D004715 1.2e-42 176.4 92 89.1
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 3.4e-42 174.9 95 85.3
Gohir.D01G169154 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.7e-41 171.4 89 91.0
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 3.1e-40 168.3 80 96.2
Oeu050315.1 Olea europaea HOM05D000963 ORTHO05D004715 3.1e-40 168.3 81 97.5
Actinidia23508 Actinidia chinensis HOM05D000963 ORTHO05D004715 2.3e-38 162.2 87 86.2
arahy.Tifrunner.gnm1.ann1.0QCF99 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-38 162.2 81 92.6
arahy.Tifrunner.gnm1.ann1.6K111H Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-38 162.2 81 92.6
arahy.Tifrunner.gnm1.ann1.B9EW81 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-38 162.2 81 92.6
arahy.Tifrunner.gnm1.ann1.NMB5YK Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-38 162.2 81 92.6
arahy.Tifrunner.gnm1.ann1.QIDR5S Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-38 162.2 81 92.6
CsaV3_2G008200 Cucumis sativus L. HOM05D000963 ORTHO05D004715 1.1e-37 159.8 77 93.5
Gohir.A01G139826 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.1e-37 159.8 106 74.5
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 5.6e-37 157.5 80 91.2
Lsat_1_v5_gn_1_109481 Lactuca sativa HOM05D000963 ORTHO05D004715 5.6e-37 157.5 89 80.9
Oeu012821.1 Olea europaea HOM05D000963 ORTHO05D004715 9.5e-37 156.8 106 75.5
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 9.5e-37 156.8 82 90.2
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 9.5e-37 156.8 82 90.2
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 1.6e-36 156.0 100 78.0
BraSC59t46506Z Brassica rapa HOM05D000963 ORTHO05D004715 1.4e-35 152.9 76 94.7
Dinv05169 Davidia involucrata HOM05D000963 ORTHO05D004715 1.5e-34 149.4 80 87.5
arahy.Tifrunner.gnm1.ann1.D5AR02 Arachis hypogaea HOM05D000963 ORTHO05D004715 9.8e-34 146.7 92 79.3
arahy.Tifrunner.gnm1.ann1.LM30Y3 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.9e-33 145.2 81 82.7
unitig_91.g26522 Utricularia gibba HOM05D000963 ORTHO05D004715 6.4e-33 144.1 89 78.7
unitig_91.g26525 Utricularia gibba HOM05D000963 ORTHO05D004715 6.4e-33 144.1 89 78.7
Gohir.D01G023469 Gossypium hirsutum HOM05D000963 ORTHO05D004715 8.3e-33 143.7 76 88.2
Gorai.002G027900 Gossypium raimondii HOM05D000963 ORTHO05D004715 1.1e-32 143.3 76 86.8
FAN18G1953 Fragaria x ananassa HOM05D000315 ORTHO05D004100 2.4e-32 142.1 89 77.5
Phvul.003G259600 Phaseolus vulgaris HOM05D000963 ORTHO05D004715 4.6e-31 137.9 88 76.1
Gohir.A04G039030 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.0e-30 135.2 71 88.7
CSS0016818 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D004715 3.3e-29 131.7 106 64.2
SabraPtG0005400 Salix brachista HOM05D000963 ORTHO05D004715 4.3e-29 131.3 74 86.5
Glyma.06G274000 Glycine max HOM05D000963 ORTHO05D004715 9.5e-29 130.2 91 71.4
Rhsim12G0135200 Rhododendron simsii HOM05D000963 ORTHO05D004715 6.2e-28 127.5 57 98.2
Gohir.D11G164850 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.2e-27 124.4 64 92.2
Lsat_1_v5_gn_2_90421 Lactuca sativa HOM05D000963 ORTHO05D004715 1.2e-26 123.2 66 90.9
Nitab4.5_0012234g0080 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.3e-25 119.8 81 76.5
Nitab4.5_0004137g0020 Nicotiana tabacum HOM05D000963 ORTHO05D004715 2.9e-25 118.6 66 89.4
BcaNung01516 Brassica carinata HOM05D000963 ORTHO05D004715 1.1e-24 116.7 57 91.2
Sabra08G0089800 Salix brachista HOM05D000963 ORTHO05D004715 2.4e-24 115.5 92 66.3
VMungo0331G0858 Vigna mungo HOM05D000963 ORTHO05D004715 5.4e-24 114.4 69 76.8
Mapoly0147s0015 Marchantia polymorpha HOM05D000963 ORTHO05D004715 1.1e-21 106.7 106 54.7
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 4.3e-21 104.8 45 100.0
Gohir.A01G119775 Gossypium hirsutum HOM05D000963 ORTHO05D004715 9.5e-21 103.6 54 90.7
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 1.2e-20 103.2 49 91.8
Nitab4.5_0007400g0120 Nicotiana tabacum HOM05D000963 ORTHO05D004715 2.8e-20 102.1 61 85.2
DCAR_017253 Daucus carota HOM05D000963 ORTHO05D004715 1.8e-19 99.4 58 84.5
Manes.18G094701 Manihot esculenta HOM05D000963 ORTHO05D004715 3.1e-19 98.6 52 88.5
Gohir.A01G139250 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.2e-19 97.8 46 95.7
Hma1.2p1_0051F.1_g029250 Hydrangea macrophylla HOM05D000963 ORTHO05D004715 5.2e-19 97.8 43 95.3
Potri.002G263451 Populus trichocarpa HOM05D000963 ORTHO05D004715 7.5e-18 94.0 54 81.5
TPR.G27622 Trifolium pratense HOM05D000963 ORTHO05D004715 7.5e-18 94.0 46 89.1
Oeu033793.1 Olea europaea HOM05D001982 ORTHO05D003938 3.7e-17 91.7 54 83.3
Medtr1g105230 Medicago truncatula HOM05D000963 ORTHO05D004715 8.3e-17 90.5 42 92.9
COL.COLO4_03191 Corchorus olitorius HOM05D000963 ORTHO05D004715 7.1e-16 87.4 70 65.7
CAN.G1594.2 Capsicum annuum HOM05D016096 ORTHO05D016167 1.7e-14 82.8 42 90.5
BolSC46t60965H Brassica oleracea HOM05D000963 ORTHO05D004715 3.0e-14 82.0 40 95.0
Psat5g119040 Pisum sativum HOM05D000963 ORTHO05D004715 5.1e-14 81.3 84 56.0
BraSC59t46544Z Brassica rapa HOM05D000963 ORTHO05D004715 8.6e-14 80.5 47 80.9
BolSC29t60514H Brassica oleracea HOM05D000963 ORTHO05D004715 1.1e-13 80.1 40 92.5
Cpa.g.sc302.1 Carica papaya HOM05D000963 ORTHO05D004715 1.1e-13 80.1 41 92.7
BolSC29t60553H Brassica oleracea HOM05D000963 ORTHO05D004715 4.3e-13 78.2 38 94.7
BolSC35t60711H Brassica oleracea HOM05D000963 ORTHO05D004715 1.6e-12 76.3 47 76.6
BolSC45t60901H Brassica oleracea HOM05D000963 ORTHO05D004715 1.6e-12 76.3 47 76.6
FvH4_7g01961 Fragaria vesca HOM05D000963 ORTHO05D004715 2.1e-12 75.9 106 46.2
FAN01G1433 Fragaria x ananassa HOM05D000963 ORTHO05D004715 2.8e-12 75.5 36 97.2
BolC2t10589H Brassica oleracea HOM05D000963 ORTHO05D004715 3.6e-12 75.1 40 87.5
BolSC49t61150H Brassica oleracea HOM05D000963 ORTHO05D004715 3.6e-12 75.1 40 87.5
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 2.3e-11 72.4 40 85.0
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 2.3e-11 72.4 40 85.0
Gorai.002G200300 Gossypium raimondii HOM05D000963 ORTHO05D004715 2.3e-11 72.4 35 88.6
BolC2t10606H Brassica oleracea HOM05D000963 ORTHO05D004715 4.0e-11 71.6 48 75.0
EL10Ac7g17374 Beta vulgaris HOM05D000963 ORTHO05D004715 2.9e-09 65.5 38 84.2
Sc21g0003630 Simmondsia chinensis HOM05D000556 ORTHO05D000404 6.4e-09 64.3 46 71.7
Migut.N00577 Erythranthe guttata HOM05D000963 ORTHO05D004715 1.4e-08 63.2 51 72.5
EL10Ac7g17381 Beta vulgaris HOM05D000963 ORTHO05D004715 1.6e-07 59.7 38 76.3
FAN06G2610 Fragaria x ananassa HOM05D000963 ORTHO05D004715 8.6e-06 53.9 44 59.1


User provided reference genes

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