Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G069700 Populus trichocarpa HOM05D006665 ORTHO05D008327 1.1e-220 769.6 376 100.0
Sabra11G0053800 Salix brachista HOM05D006665 ORTHO05D008327 7.1e-212 740.3 376 96.5
Sabra11G0057300 Salix brachista HOM05D000074 ORTHO05D000220 1.2e-195 686.4 351 95.4
Cfa000642 Carpinus fangiana HOM05D006665 ORTHO05D008327 1.9e-164 582.8 378 73.8
QL05p048519 Quercus lobata HOM05D006665 ORTHO05D008327 4.0e-162 575.1 376 75.0
TWI73G0293 Tripterygium wilfordii HOM05D006665 ORTHO05D008327 3.4e-161 572.0 374 73.3
Duzib235G0558 Durio zibethinus HOM05D006665 ORTHO05D008327 4.8e-160 568.2 377 71.1
Manes.17G058400 Manihot esculenta HOM05D006665 ORTHO05D008327 8.3e-160 567.4 374 74.6
Gorai.011G037800 Gossypium raimondii HOM05D006665 ORTHO05D008327 5.4e-159 564.7 377 69.8
Gohir.D10G035900 Gossypium hirsutum HOM05D006665 ORTHO05D008327 9.1e-159 563.9 377 69.8
GSVIVG01021249001 Vitis vinifera HOM05D006665 ORTHO05D008327 2.0e-158 562.8 376 72.3
Gohir.A10G035200 Gossypium hirsutum HOM05D006665 ORTHO05D008327 2.7e-158 562.4 377 69.8
Thecc.06G166800 Theobroma cacao HOM05D006665 ORTHO05D008327 3.8e-157 558.5 377 70.3
TAR627G0088 Trochodendron aralioides HOM05D006665 ORTHO05D008327 5.0e-157 558.1 376 70.5
Ciclev10015641m.g Citrus clementina HOM05D006665 ORTHO05D008327 4.2e-156 555.1 374 71.9
CSS0008142 Camellia sinensis var. sinensis HOM05D006665 ORTHO05D008327 9.4e-156 553.9 372 71.0
COL.COLO4_31251 Corchorus olitorius HOM05D006665 ORTHO05D008327 8.0e-155 550.8 396 66.9
Nn3g21119 Nelumbo nucifera HOM05D006665 ORTHO05D008327 1.0e-154 550.4 375 69.9
PGR042G0915 Punica granatum HOM05D006665 ORTHO05D008327 3.0e-154 548.9 376 69.4
THA.LOC104812882 Tarenaya hassleriana HOM05D006665 ORTHO05D008327 4.9e-152 541.6 379 68.3
Cc02_g15490 Coffea canephora HOM05D006665 ORTHO05D008327 4.5e-150 535.0 379 69.7
Dinv32346 Davidia involucrata HOM05D006665 ORTHO05D008327 5.9e-150 534.6 376 69.7
Eucgr.E04353 Eucalyptus grandis HOM05D006665 ORTHO05D008327 1.7e-149 533.1 377 69.5
Eucgr.E02766 Eucalyptus grandis HOM05D006665 ORTHO05D008327 3.8e-149 531.9 377 69.2
Prupe.4G065800 Prunus persica HOM05D006665 ORTHO05D008327 3.8e-149 531.9 376 69.7
HanXRQChr15g0480791 Helianthus annuus HOM05D006665 ORTHO05D008327 8.6e-149 530.8 372 68.3
CiPaw.09G072200 Carya illinoinensis HOM05D006665 ORTHO05D008327 3.0e-146 522.3 378 68.3
FvH4_1g07520 Fragaria vesca HOM05D006665 ORTHO05D008327 2.6e-145 519.2 377 68.2
RcHm_v2.0_Chr5g0011451 Rosa chinensis HOM05D006665 ORTHO05D008327 2.6e-145 519.2 377 68.2
CsaV3_1G033140 Cucumis sativus L. HOM05D006665 ORTHO05D008327 4.4e-145 518.5 374 65.5
PSO170G0566 Papaver somniferum HOM05D000074 ORTHO05D000220 4.4e-145 518.5 376 66.2
Aqoxy4G00257 Aquilegia oxysepala HOM05D006665 ORTHO05D008327 5.7e-145 518.1 376 65.7
MD05G1296500 Malus domestica HOM05D006665 ORTHO05D008327 5.7e-145 518.1 375 67.2
CANSAT80G2447 Cannabis sativa HOM05D000074 ORTHO05D000220 1.3e-144 516.9 375 67.2
FAN26G0384 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.7e-144 516.5 377 67.6
FAN23G0824 Fragaria x ananassa HOM05D006665 ORTHO05D008327 4.9e-144 515.0 377 67.4
Sed0010934 Sechium edule HOM05D006665 ORTHO05D008327 1.1e-143 513.8 372 65.1
FAN19G1242 Fragaria x ananassa HOM05D006665 ORTHO05D008327 2.4e-143 512.7 378 67.7
AT5G45760 Arabidopsis thaliana HOM05D006665 ORTHO05D008327 1.2e-142 510.4 377 66.6
Lalb_Chr13g0295211 Lupinus albus HOM05D006665 ORTHO05D008327 1.2e-142 510.4 377 64.2
MBI07_g09544_MAGBIO Magnolia biondii HOM05D006665 ORTHO05D008327 3.9e-141 505.4 380 63.9
Carub.0008s0223 Capsella rubella HOM05D006665 ORTHO05D008327 8.6e-141 504.2 377 65.8
AL8G12850 Arabidopsis lyrata HOM05D006665 ORTHO05D008327 1.1e-140 503.8 377 66.0
PGSC0003DMG400028425 Solanum tuberosum HOM05D006665 ORTHO05D008327 2.5e-140 502.7 377 64.2
CARHR176220 Cardamine hirsuta HOM05D006665 ORTHO05D008327 5.6e-140 501.5 375 64.8
Sp2g10670 Schrenkiella parvula HOM05D006665 ORTHO05D008327 7.3e-140 501.1 377 65.5
DCAR_005186 Daucus carota HOM05D006665 ORTHO05D008327 9.5e-140 500.7 373 62.7
Solyc02g072230.3 Solanum lycopersicum HOM05D006665 ORTHO05D008327 2.1e-139 499.6 377 63.4
MSTRG.7424 Avicennia marina HOM05D006665 ORTHO05D008327 2.8e-139 499.2 377 66.3
Sopen02g021210 Solanum pennellii HOM05D006665 ORTHO05D008327 3.6e-139 498.8 377 63.4
Nitab4.5_0000437g0180 Nicotiana tabacum HOM05D006665 ORTHO05D008327 1.2e-137 493.8 384 63.3
A09p21920 Brassica napus HOM05D006665 ORTHO05D008327 3.4e-137 492.3 371 64.4
Nitab4.5_0008526g0030 Nicotiana tabacum HOM05D006665 ORTHO05D008327 4.9e-136 488.4 377 63.4
ECA236G1698 Erigeron canadensis HOM05D000074 ORTHO05D000220 6.4e-136 488.0 366 64.8
Lj2C318T4 Lonicera japonica HOM05D006665 ORTHO05D008327 4.1e-135 485.3 376 65.4
BolC9t55679H Brassica oleracea HOM05D006665 ORTHO05D008327 9.2e-135 484.2 371 63.9
Sc05g0006960 Simmondsia chinensis HOM05D006665 ORTHO05D008327 1.3e-133 480.3 374 62.8
C09p28090 Brassica napus HOM05D006665 ORTHO05D008327 3.0e-133 479.2 374 63.1
FAN26G1216 Fragaria x ananassa HOM05D006665 ORTHO05D008327 3.3e-132 475.7 377 64.2
Migut.M01013 Erythranthe guttata HOM05D006665 ORTHO05D008327 4.3e-132 475.3 378 62.2
BraA09t37795Z Brassica rapa HOM05D006665 ORTHO05D008327 5.6e-132 474.9 362 63.8
BcaB07g30869 Brassica carinata HOM05D006665 ORTHO05D008327 1.5e-129 466.8 369 62.3
Thhalv10000923m.g Eutrema salsugineum HOM05D006665 ORTHO05D008327 2.0e-129 466.5 401 59.4
BcaC04g21745 Brassica carinata HOM05D006665 ORTHO05D008327 4.4e-129 465.3 363 63.1
Aa31LG9G7310 Aethionema arabicum HOM05D006665 ORTHO05D008327 9.8e-129 464.2 385 60.8
ClCG03G007500 Citrullus lanatus HOM05D000074 ORTHO05D000220 1.7e-128 463.4 369 61.8
Glyma.05G160032 Glycine max HOM05D006665 ORTHO05D008327 2.2e-128 463.0 376 58.2
Phvul.002G240300 Phaseolus vulgaris HOM05D006665 ORTHO05D008327 3.7e-128 462.2 376 58.8
Medtr8g086605 Medicago truncatula HOM05D006665 ORTHO05D008327 2.4e-127 459.5 375 57.9
Glyma.08G117600 Glycine max HOM05D006665 ORTHO05D008327 9.2e-127 457.6 376 57.4
TPR.G6756 Trifolium pratense HOM05D006665 ORTHO05D008327 3.3e-124 449.1 375 56.0
Peaxi162Scf00371g00319 Petunia axillaris HOM05D006665 ORTHO05D008327 7.3e-124 448.0 375 59.7
EL10Ac8g20571 Beta vulgaris HOM05D006665 ORTHO05D008327 6.2e-123 444.9 373 59.2
Lj4g0005276 Lotus japonicus HOM05D000074 ORTHO05D008327 3.1e-122 442.6 369 57.2
arahy.Tifrunner.gnm1.ann1.L41MS4 Arachis hypogaea HOM05D006665 ORTHO05D008327 9.2e-119 431.0 376 57.4
AUR62027710 Chenopodium quinoa HOM05D006665 ORTHO05D008327 9.6e-116 421.0 365 58.6
arahy.Tifrunner.gnm1.ann1.UF726L Arachis hypogaea HOM05D006665 ORTHO05D008327 1.2e-115 420.6 370 57.0
Os01g0205100 Oryza sativa ssp. japonica HOM05D006665 ORTHO05D008327 1.2e-115 420.6 373 56.0
Actinidia07650 Actinidia chinensis HOM05D006665 ORTHO05D008327 5.3e-106 388.7 246 72.8
SalBow8G2667 Salvia bowleyana HOM05D000074 ORTHO05D000220 1.8e-98 363.6 395 50.4
SEGI_17628 Sequoiadendron giganteum HOM05D006665 ORTHO05D008327 3.8e-96 355.9 379 45.6
Ah.14g087040 Amaranthus hybridus HOM05D006665 ORTHO05D008327 1.9e-95 353.6 399 48.9
ATR0012G051 Amborella trichopoda HOM05D006665 ORTHO05D008327 3.2e-95 352.8 316 55.1
CDE06G0006 Ceratophyllum demersum HOM05D006665 ORTHO05D008327 2.9e-80 303.1 353 48.7
vmacro16044 Vaccinium macrocarpon HOM05D006665 ORTHO05D008327 1.8e-77 293.9 223 65.5
Pp3c18_2320 Physcomitrium patens HOM05D006665 ORTHO05D008327 1.3e-75 287.7 378 41.3
Zm00001eb120830 Zea mays HOM05D006665 ORTHO05D008327 8.2e-75 285.0 298 49.3
Atru.chr10.1584 Acer truncatum HOM05D006665 ORTHO05D008327 2.9e-72 276.6 187 73.3
Atru.chr10.1583 Acer truncatum HOM05D006665 ORTHO05D008327 1.1e-71 274.6 184 71.2
Rhsim02G0145600 Rhododendron simsii HOM05D006665 ORTHO05D008327 4.6e-70 269.2 208 64.9
Haze_06187 Corylus avellana HOM05D006665 ORTHO05D008327 8.8e-69 265.0 185 71.4
Lsat_1_v5_gn_7_25921 Lactuca sativa HOM05D006665 ORTHO05D008327 8.8e-69 265.0 208 62.5
Mapoly0020s0147 Marchantia polymorpha HOM05D006665 ORTHO05D008327 3.1e-66 256.5 370 38.1
AagrBONN_evm.TU.Sc2ySwM_117.2766 Anthoceros agrestis HOM05D006665 ORTHO05D008327 5.9e-65 252.3 316 41.1
SMO118G0425 Selaginella moellendorffii HOM05D006665 ORTHO05D008327 5.9e-65 252.3 377 37.4
Dinv12760 Davidia involucrata HOM05D006665 ORTHO05D008327 7.7e-65 251.9 253 54.9
CBR_g34019 Chara braunii HOM05D006665 ORTHO05D008327 2.5e-63 246.9 406 36.5
VMungo0251G1318 Vigna mungo HOM05D006665 ORTHO05D008327 1.6e-62 244.2 221 55.2
Cpa.g.sc7.98 Carica papaya HOM05D006665 ORTHO05D008327 1.1e-58 231.5 162 66.0
AUR62039464 Chenopodium quinoa HOM05D006665 ORTHO05D008327 1.9e-55 220.7 187 59.9
BcaB06g27285 Brassica carinata HOM05D006665 ORTHO05D008327 4.2e-55 219.5 249 47.8
Hund25815 Selenicereus undatus HOM05D006665 ORTHO05D008327 1.6e-54 217.6 180 62.2
Hma1.2p1_0113F.1_g055090 Hydrangea macrophylla HOM05D006665 ORTHO05D008327 4.4e-52 209.5 212 51.9
Hma1.2p1_0113F.1_g055096 Hydrangea macrophylla HOM05D006665 ORTHO05D008327 4.4e-52 209.5 212 51.9
Oeu043117.1 Olea europaea HOM05D006665 ORTHO05D008327 6.3e-43 179.1 149 63.8
BcaB04g18653 Brassica carinata HOM05D006665 ORTHO05D008327 4.5e-41 172.9 153 57.5
Psat2g000080 Pisum sativum HOM05D006665 ORTHO05D008327 1.3e-40 171.4 141 59.6
SGA_v2.0_scaffold1G00072 Striga asiatica HOM05D006665 ORTHO05D008327 6.5e-40 169.1 127 63.0
Psat7g069040 Pisum sativum HOM05D006665 ORTHO05D008327 6.1e-38 162.5 271 36.5
vmacro16043 Vaccinium macrocarpon HOM05D006665 ORTHO05D008327 2.8e-35 153.7 103 70.9
Haze_06186 Corylus avellana HOM05D006665 ORTHO05D008327 2.4e-34 150.6 143 54.5
Psat7g069080 Pisum sativum HOM05D006665 ORTHO05D008327 5.0e-32 142.9 122 51.6
RcHm_v2.0_Chr5g0011471 Rosa chinensis HOM05D006665 ORTHO05D008327 3.4e-28 130.2 173 42.2
Sabra04G0038600 Salix brachista HOM05D000074 ORTHO05D000220 2.4e-26 124.0 110 65.5
MCO11G387 Micromonas commoda HOM05D006665 ORTHO05D008327 3.1e-21 107.1 472 21.6
FAN25G1258 Fragaria x ananassa HOM05D006665 ORTHO05D008327 8.9e-21 105.5 76 71.1
Cre16.g678400 Chlamydomonas reinhardtii HOM05D006665 ORTHO05D008327 1.2e-20 105.1 333 26.4
SEGI_34445 Sequoiadendron giganteum HOM05D006665 ORTHO05D008327 7.5e-20 102.4 105 42.9
FvH4_3g07410 Fragaria vesca HOM05D006665 ORTHO05D008327 3.2e-18 97.1 163 43.6
FAN11G1287 Fragaria x ananassa HOM05D006665 ORTHO05D008327 9.2e-18 95.5 193 38.9
arahy.Tifrunner.gnm1.ann1.XDX40G Arachis hypogaea HOM05D006665 ORTHO05D008327 3.9e-16 90.1 76 50.0
arahy.Tifrunner.gnm1.ann1.H6TAT4 Arachis hypogaea HOM05D006665 ORTHO05D008327 1.5e-15 88.2 98 43.9
VMungo0251G0552 Vigna mungo HOM05D006665 ORTHO05D008327 9.8e-12 75.5 74 45.9


User provided reference genes

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