Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G068100 Populus trichocarpa HOM05D004030 ORTHO05D004952 5.7e-226 787.3 419 100.0
Sabra11G0049100 Salix brachista HOM05D004030 ORTHO05D004952 2.3e-187 659.1 469 79.5
Potri.004G058700 Populus trichocarpa HOM05D004030 ORTHO05D004952 4.4e-170 601.7 424 81.8
Manes.16G041300 Manihot esculenta HOM05D004030 ORTHO05D004952 5.3e-131 471.9 424 65.6
CANSAT80G0365 Cannabis sativa HOM05D004030 ORTHO05D004952 4.1e-107 392.5 447 54.1
ClCG03G007580 Citrullus lanatus HOM05D004030 ORTHO05D004952 9.0e-107 391.3 455 54.1
Thecc.06G168200 Theobroma cacao HOM05D004030 ORTHO05D004952 1.2e-106 391.0 435 58.2
TAR627G0229 Trochodendron aralioides HOM05D004030 ORTHO05D004952 2.6e-106 389.8 446 55.6
MELO3C002663.2 Cucumis melo HOM05D004030 ORTHO05D004952 5.0e-105 385.6 453 54.7
CsaV3_1G033240 Cucumis sativus L. HOM05D004030 ORTHO05D004952 4.2e-104 382.5 445 54.2
Gohir.D10G036800 Gossypium hirsutum HOM05D004030 ORTHO05D004952 4.2e-104 382.5 438 54.3
Sed0004310 Sechium edule HOM05D004030 ORTHO05D004952 3.9e-102 375.9 459 51.9
Dinv16793 Davidia involucrata HOM05D004030 ORTHO05D004952 1.1e-101 374.4 452 52.7
Ciclev10015509m.g Citrus clementina HOM05D004030 ORTHO05D004952 1.9e-101 373.6 425 56.0
Glyma.04G063400 Glycine max HOM05D004030 ORTHO05D004952 4.3e-101 372.5 443 53.5
Phvul.009G089700 Phaseolus vulgaris HOM05D004030 ORTHO05D004952 2.2e-100 370.2 434 55.1
GSVIVG01021235001 Vitis vinifera HOM05D004030 ORTHO05D004952 8.2e-100 368.2 434 53.7
Cfa013812 Carpinus fangiana HOM05D004030 ORTHO05D004952 1.4e-99 367.5 448 52.0
Duzib235G1256 Durio zibethinus HOM05D004030 ORTHO05D004952 1.5e-98 364.0 433 55.9
CiPaw.09G071100 Carya illinoinensis HOM05D004030 ORTHO05D004952 1.0e-97 361.3 459 51.9
CSS0010331 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 1.3e-97 360.9 330 61.5
Medtr1g087790 Medicago truncatula HOM05D004030 ORTHO05D004952 1.3e-97 360.9 437 52.6
Prupe.4G063800 Prunus persica HOM05D004030 ORTHO05D004952 1.3e-97 360.9 452 51.8
MBI07_g09555_MAGBIO Magnolia biondii HOM05D004030 ORTHO05D004952 6.5e-97 358.6 473 50.5
TWI39G0053 Tripterygium wilfordii HOM05D004030 ORTHO05D004952 6.5e-97 358.6 431 53.1
COL.COLO4_31267 Corchorus olitorius HOM05D004030 ORTHO05D004952 8.5e-97 358.2 450 52.0
Nn3g19533 Nelumbo nucifera HOM05D004030 ORTHO05D004952 2.5e-96 356.7 436 53.4
Gorai.011G038700 Gossypium raimondii HOM05D004030 ORTHO05D004952 3.2e-96 356.3 422 52.8
Gohir.A10G036100 Gossypium hirsutum HOM05D004030 ORTHO05D004952 4.2e-96 355.9 431 52.0
PGSC0003DMG400028477 Solanum tuberosum HOM05D004030 ORTHO05D004952 7.2e-96 355.1 470 50.4
Ca_10308_v3 Cicer arietinum L. HOM05D004030 ORTHO05D004952 1.6e-95 354.0 443 53.0
Sopen02g021480 Solanum pennellii HOM05D004030 ORTHO05D004952 2.7e-95 353.2 469 50.5
Solyc02g072510.3 Solanum lycopersicum HOM05D004030 ORTHO05D004952 7.9e-95 351.7 469 50.5
Haze_22485 Corylus avellana HOM05D004030 ORTHO05D004952 4.4e-93 345.9 428 50.7
Actinidia16784 Actinidia chinensis HOM05D004030 ORTHO05D004952 9.7e-93 344.7 359 57.1
Migut.M01023 Erythranthe guttata HOM05D004030 ORTHO05D004952 3.7e-92 342.8 438 50.9
VMungo1309G1983 Vigna mungo HOM05D004030 ORTHO05D004952 6.3e-92 342.0 456 50.7
Lalb_Chr18g0054631 Lupinus albus HOM05D004030 ORTHO05D004952 4.1e-91 339.3 434 52.8
Manes.17G057500 Manihot esculenta HOM05D004030 ORTHO05D004952 5.3e-91 339.0 272 68.0
MD05G1298600 Malus domestica HOM05D004030 ORTHO05D004952 9.1e-91 338.2 321 60.7
MD10G1277900 Malus domestica HOM05D004030 ORTHO05D004952 9.1e-91 338.2 437 50.8
ECA248G1387 Erigeron canadensis HOM05D004030 ORTHO05D004952 2.6e-90 336.7 440 49.5
Eucgr.E02762 Eucalyptus grandis HOM05D004030 ORTHO05D004952 2.6e-90 336.7 458 48.7
Rhsim13G0189000 Rhododendron simsii HOM05D004030 ORTHO05D004952 4.5e-90 335.9 390 55.4
Cfa000628 Carpinus fangiana HOM05D004030 ORTHO05D004952 1.3e-89 334.3 450 51.8
Lj6g0006857 Lotus japonicus HOM05D004030 ORTHO05D004952 2.5e-88 330.1 454 48.5
Duzib160G0274 Durio zibethinus HOM05D004030 ORTHO05D004952 7.2e-88 328.6 426 50.2
CAN.G411.88 Capsicum annuum HOM05D004030 ORTHO05D004952 1.6e-87 327.4 476 49.4
arahy.Tifrunner.gnm1.ann1.6TT57W Arachis hypogaea HOM05D004030 ORTHO05D004952 3.6e-87 326.2 454 50.0
Aqoxy1G02017 Aquilegia oxysepala HOM05D004030 ORTHO05D004952 6.1e-87 325.5 448 48.4
EL10Ac8g20580 Beta vulgaris HOM05D004030 ORTHO05D004952 1.8e-86 323.9 428 50.2
DCAR_020881 Daucus carota HOM05D004030 ORTHO05D004952 2.6e-85 320.1 457 47.5
QL05p048142 Quercus lobata HOM05D004030 ORTHO05D004952 3.3e-85 319.7 439 50.6
SGA_v2.0_scaffold1G00064 Striga asiatica HOM05D004030 ORTHO05D004952 1.3e-84 317.8 475 46.3
Cc02_g15190 Coffea canephora HOM05D004030 ORTHO05D004952 3.7e-84 316.2 439 49.2
DCAR_005202 Daucus carota HOM05D004030 ORTHO05D004952 4.8e-84 315.8 470 46.8
Peaxi162Scf00302g00311 Petunia axillaris HOM05D004030 ORTHO05D004952 4.8e-84 315.8 432 50.2
Dinv40699 Davidia involucrata HOM05D004030 ORTHO05D004952 2.4e-83 313.5 285 60.7
RcHm_v2.0_Chr5g0011231 Rosa chinensis HOM05D004030 ORTHO05D004952 2.4e-83 313.5 439 50.1
Nitab4.5_0005171g0040 Nicotiana tabacum HOM05D004030 ORTHO05D004952 3.1e-83 313.2 479 47.4
Sabra04G0038000 Salix brachista HOM05D004030 ORTHO05D004952 1.6e-82 310.8 272 67.3
Hund21166 Selenicereus undatus HOM05D004030 ORTHO05D004952 1.6e-82 310.8 371 54.2
arahy.Tifrunner.gnm1.ann1.HYDG6Q Arachis hypogaea HOM05D004030 ORTHO05D004952 3.5e-82 309.7 516 44.6
FAN11G3556 Fragaria x ananassa HOM05D004030 ORTHO05D004952 1.3e-81 307.8 429 51.5
Glyma.06G064600 Glycine max HOM05D004030 ORTHO05D004952 2.2e-81 307.0 384 50.8
FvH4_3g07540 Fragaria vesca HOM05D004030 ORTHO05D004952 1.5e-80 304.3 429 51.0
SalBow8G0896 Salvia bowleyana HOM05D004030 ORTHO05D004952 1.9e-80 303.9 487 43.7
Haze_06204 Corylus avellana HOM05D004030 ORTHO05D004952 2.5e-80 303.5 444 48.2
CDE10G0195 Ceratophyllum demersum HOM05D004030 ORTHO05D004952 4.2e-80 302.8 441 47.6
Oeu043115.1 Olea europaea HOM05D004030 ORTHO05D004952 3.6e-79 299.7 453 47.0
FAN21G1198 Fragaria x ananassa HOM05D004030 ORTHO05D004952 1.0e-78 298.1 427 51.8
HanXRQChr11g0350521 Helianthus annuus HOM05D004030 ORTHO05D004952 3.3e-77 293.1 424 47.9
Psat6g163160 Pisum sativum HOM05D004030 ORTHO05D004952 5.7e-77 292.4 378 50.0
SEGI_23147 Sequoiadendron giganteum HOM05D004030 ORTHO05D004952 1.7e-76 290.8 453 43.9
FAN25G0294 Fragaria x ananassa HOM05D004030 ORTHO05D004952 2.2e-76 290.4 434 49.1
Nitab4.5_0007465g0050 Nicotiana tabacum HOM05D004030 ORTHO05D004952 3.7e-76 289.7 466 46.6
arahy.Tifrunner.gnm1.ann1.M207AG Arachis hypogaea HOM05D004030 ORTHO05D004952 6.3e-76 288.9 322 55.0
PSO063G1415 Papaver somniferum HOM05D004030 ORTHO05D004952 3.1e-75 286.6 379 48.0
Os01g0759700 Oryza sativa ssp. japonica HOM05D004030 ORTHO05D004952 1.6e-74 284.3 325 52.0
PSO782G4674 Papaver somniferum HOM05D004030 ORTHO05D004952 1.6e-74 284.3 379 47.8
HPP92_021480 Vanilla planifolia HOM05D004030 ORTHO05D004952 1.3e-73 281.2 464 42.0
Sp1g25170 Schrenkiella parvula HOM05D004030 ORTHO05D004952 2.2e-73 280.4 309 55.0
Ah.09g233420 Amaranthus hybridus HOM05D004030 ORTHO05D004952 5.0e-73 279.3 360 49.4
AUR62031227 Chenopodium quinoa HOM05D004030 ORTHO05D004952 5.0e-73 279.3 335 52.8
Atru.chr10.1642 Acer truncatum HOM05D004030 ORTHO05D004952 1.5e-72 277.7 334 53.9
Aa31LG6G6290 Aethionema arabicum HOM05D004030 ORTHO05D004952 1.5e-72 277.7 283 56.9
Zm00001eb370530 Zea mays HOM05D004030 ORTHO05D004952 1.2e-71 274.6 447 45.4
AT1G29220 Arabidopsis thaliana HOM05D004030 ORTHO05D004952 3.6e-71 273.1 310 52.3
AUR62027698 Chenopodium quinoa HOM05D004030 ORTHO05D004952 3.6e-71 273.1 409 46.2
FAN11G0126 Fragaria x ananassa HOM05D004030 ORTHO05D004952 4.7e-71 272.7 318 54.7
Thhalv10008084m.g Eutrema salsugineum HOM05D004030 ORTHO05D004952 5.2e-70 269.2 309 54.0
BcaB07g32509 Brassica carinata HOM05D004030 ORTHO05D004952 8.8e-70 268.5 421 44.7
Carub.0001s2743 Capsella rubella HOM05D004030 ORTHO05D004952 1.2e-69 268.1 265 57.7
THA.LOC104820602 Tarenaya hassleriana HOM05D004030 ORTHO05D004952 1.5e-69 267.7 268 56.3
ATR0824G134 Amborella trichopoda HOM05D004030 ORTHO05D004952 2.6e-69 266.9 429 44.1
PGR031G0618 Punica granatum HOM05D004030 ORTHO05D004952 2.6e-69 266.9 303 53.5
AL1G42980 Arabidopsis lyrata HOM05D004030 ORTHO05D004952 3.4e-69 266.5 305 54.1
A09p37120 Brassica napus HOM05D004030 ORTHO05D004952 6.3e-68 262.3 267 57.7
FvH4_3g37800 Fragaria vesca HOM05D004030 ORTHO05D004952 1.8e-67 260.8 415 48.2
BcaC05g26946 Brassica carinata HOM05D004030 ORTHO05D004952 5.4e-67 259.2 267 57.3
C05p27930 Brassica napus HOM05D004030 ORTHO05D004952 5.4e-67 259.2 267 57.3
TWI63G1163 Tripterygium wilfordii HOM05D004030 ORTHO05D004952 5.4e-67 259.2 250 60.0
BraA09t39228Z Brassica rapa HOM05D004030 ORTHO05D004952 1.3e-65 254.6 273 56.4
vmacro03922 Vaccinium macrocarpon HOM05D004030 ORTHO05D004952 1.3e-65 254.6 599 35.9
Lsat_1_v5_gn_1_111240 Lactuca sativa HOM05D004030 ORTHO05D004952 1.7e-65 254.2 449 44.3
Sc07g0007700 Simmondsia chinensis HOM05D004030 ORTHO05D004952 2.3e-65 253.8 342 47.7
CARHR028550 Cardamine hirsuta HOM05D004030 ORTHO05D004952 5.0e-65 252.7 429 44.1
BolC5t31519H Brassica oleracea HOM05D004030 ORTHO05D004952 9.5e-64 248.4 283 54.1
FAN16G1462 Fragaria x ananassa HOM05D004030 ORTHO05D004952 1.2e-63 248.1 286 54.2
arahy.Tifrunner.gnm1.ann1.G7P63M Arachis hypogaea HOM05D004030 ORTHO05D004952 2.1e-63 247.3 417 43.6
Nn1g02598 Nelumbo nucifera HOM05D004030 ORTHO05D004952 2.1e-63 247.3 270 56.3
arahy.Tifrunner.gnm1.ann1.JIP48Q Arachis hypogaea HOM05D004030 ORTHO05D004952 6.1e-63 245.7 320 50.9
TPR.G40724 Trifolium pratense HOM05D004030 ORTHO05D004952 1.7e-60 237.7 188 66.0
SalBow5G1441 Salvia bowleyana HOM05D004030 ORTHO05D004952 7.5e-53 212.2 314 46.8
Actinidia35586 Actinidia chinensis HOM05D004030 ORTHO05D004952 3.7e-52 209.9 337 44.5
HPP92_010042 Vanilla planifolia HOM05D004030 ORTHO05D004952 7.8e-50 202.2 268 46.6
arahy.Tifrunner.gnm1.ann1.LWKQ47 Arachis hypogaea HOM05D004030 ORTHO05D004952 1.3e-49 201.4 299 46.8
Ah.16g107150 Amaranthus hybridus HOM05D004030 ORTHO05D004952 2.3e-49 200.7 305 43.0
Mapoly0022s0014 Marchantia polymorpha HOM05D004030 ORTHO05D004952 2.3e-49 200.7 325 45.2
Lalb_Chr15g0086161 Lupinus albus HOM05D004030 ORTHO05D004952 8.6e-49 198.7 289 46.4
SHI28530 Sapria himalayana HOM05D004030 ORTHO05D004952 4.3e-48 196.4 191 57.6
AagrBONN_evm.TU.Sc2ySwM_362.2754 Anthoceros agrestis HOM05D004030 ORTHO05D004952 3.1e-46 190.3 364 38.7
AagrBONN_evm.TU.Sc2ySwM_344.2041 Anthoceros agrestis HOM05D004030 ORTHO05D004952 7.5e-45 185.7 390 37.2
Lj1A1189T62 Lonicera japonica HOM05D004030 ORTHO05D004952 6.4e-44 182.6 185 56.8
COL.COLO4_06310 Corchorus olitorius HOM05D004030 ORTHO05D004952 3.0e-41 173.7 267 47.2
Zm00001eb152490 Zea mays HOM05D004030 ORTHO05D004952 2.3e-38 164.1 315 40.6
Lj9A197T43 Lonicera japonica HOM05D004030 ORTHO05D004952 4.4e-37 159.8 152 61.8
Cpa.g.sc7.87 Carica papaya HOM05D004030 ORTHO05D004952 2.9e-36 157.1 134 65.7
SMO266G0004 Selaginella moellendorffii HOM05D004030 ORTHO05D004952 9.2e-35 152.1 310 39.7
Peaxi162Scf00912g00019 Petunia axillaris HOM05D004030 ORTHO05D004952 1.2e-34 151.8 101 76.2
CAN.G566.51 Capsicum annuum HOM05D004030 ORTHO05D004952 2.1e-31 141.0 216 44.0
unitig_899.g15398 Utricularia gibba HOM05D004030 ORTHO05D004952 6.2e-31 139.4 434 31.8
BcaB03g13895 Brassica carinata HOM05D004030 ORTHO05D004952 6.8e-30 136.0 158 51.9
Lsat_1_v5_gn_6_74880 Lactuca sativa HOM05D004030 ORTHO05D004952 3.8e-28 130.2 164 45.1
Aqoxy2G00428 Aquilegia oxysepala HOM05D004030 ORTHO05D004952 4.9e-28 129.8 152 51.3
CSS0023477 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 7.1e-27 125.9 71 78.9
CSS0003365 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 2.7e-26 124.0 71 77.5
SalBow5G5223 Salvia bowleyana HOM05D004030 ORTHO05D004952 6.0e-26 122.9 70 84.3
CDE10G0435 Ceratophyllum demersum HOM05D004030 ORTHO05D004952 5.1e-25 119.8 139 52.5
Nitab4.5_0000271g0330 Nicotiana tabacum HOM05D004030 ORTHO05D004952 8.7e-25 119.0 103 58.3
Ah.16g108320 Amaranthus hybridus HOM05D004030 ORTHO05D004952 1.1e-24 118.6 66 78.8
Nitab4.5_0004602g0020 Nicotiana tabacum HOM05D004030 ORTHO05D004952 2.5e-24 117.5 94 61.7
Actinidia37045 Actinidia chinensis HOM05D004030 ORTHO05D004952 1.1e-22 112.1 226 35.0
CBR_g31948 Chara braunii HOM05D004030 ORTHO05D004952 2.6e-21 107.5 230 33.5
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 1.7e-20 104.8 68 75.0
Pp3c22_6900 Physcomitrium patens HOM05D004030 ORTHO05D004952 5.4e-19 99.8 113 50.4
SalBow5G1832 Salvia bowleyana HOM05D004030 ORTHO05D002854 9.3e-19 99.0 244 36.1
Ah.16g108870 Amaranthus hybridus HOM05D004030 ORTHO05D004952 8.7e-17 92.4 241 34.9
Ah.16g108300 Amaranthus hybridus HOM05D004030 ORTHO05D004952 1.1e-16 92.0 241 34.9
Ah.16g108330 Amaranthus hybridus HOM05D004030 ORTHO05D004952 1.1e-16 92.0 241 34.9
SalBow5G5317 Salvia bowleyana HOM05D004030 ORTHO05D004952 1.1e-16 92.0 251 33.9
Ah.16g108890 Amaranthus hybridus HOM05D004030 ORTHO05D004952 2.8e-15 87.4 257 33.1
SalBow5G5526 Salvia bowleyana HOM05D004030 ORTHO05D004952 4.8e-15 86.7 232 35.8
Pp3c21_660 Physcomitrium patens HOM05D004030 ORTHO05D004952 1.4e-14 85.1 169 36.1
FAN23G1607 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.6e-13 80.9 111 49.5
Lalb_Chr15g0086171 Lupinus albus HOM05D004030 ORTHO05D004952 3.8e-12 77.0 74 60.8
Cpa.g.sc7.86 Carica papaya HOM05D004030 ORTHO05D033917 4.9e-12 76.6 180 38.3
MCO08G144 Micromonas commoda HOM05D004030 ORTHO05D004952 2.4e-11 74.3 99 38.4
Nn1g05398 Nelumbo nucifera HOM05D067915 ORTHO05D049297 3.1e-06 57.4 137 37.2
CSS0039806 Camellia sinensis var. sinensis HOM05D043465 ORTHO05D033917 5.3e-06 56.6 134 39.6


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