Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G064800 Populus trichocarpa HOM05D005954 ORTHO05D007347 5.4e-76 287.7 161 100.0
Sabra11G0046600 Salix brachista HOM05D005954 ORTHO05D007347 2.6e-62 242.3 196 74.5
Manes.17G054200 Manihot esculenta HOM05D005954 ORTHO05D007347 6.0e-51 204.5 158 74.7
Haze_06257 Corylus avellana HOM05D005954 ORTHO05D007347 2.8e-48 195.7 160 71.9
Dinv04624 Davidia involucrata HOM05D005954 ORTHO05D007347 5.5e-44 181.4 147 74.1
Manes.16G037400 Manihot esculenta HOM05D005954 ORTHO05D007347 7.1e-44 181.0 158 70.3
Nn1g09054 Nelumbo nucifera HOM05D005954 ORTHO05D007347 9.3e-44 180.6 156 71.8
ClCG01G023670 Citrullus lanatus HOM05D005954 ORTHO05D007347 1.2e-43 180.3 158 70.3
TWI38G2142 Tripterygium wilfordii HOM05D005954 ORTHO05D007347 2.7e-43 179.1 160 72.5
MELO3C007218.2 Cucumis melo HOM05D005954 ORTHO05D007347 1.3e-42 176.8 155 69.7
Thecc.06G173000 Theobroma cacao HOM05D005954 ORTHO05D007347 1.3e-42 176.8 160 68.8
Prupe.4G059500 Prunus persica HOM05D005954 ORTHO05D007347 3.0e-42 175.6 154 68.2
CsaV3_6G050830 Cucumis sativus L. HOM05D005954 ORTHO05D007347 6.7e-42 174.5 154 68.8
FAN21G0082 Fragaria x ananassa HOM05D005954 ORTHO05D007347 6.7e-42 174.5 146 74.0
CANSAT11G0094 Cannabis sativa HOM05D005954 ORTHO05D007347 8.7e-42 174.1 161 68.3
FvH4_3g07980 Fragaria vesca HOM05D005954 ORTHO05D007347 1.5e-41 173.3 146 73.3
FAN16G0914 Fragaria x ananassa HOM05D005954 ORTHO05D007347 1.5e-41 173.3 146 73.3
Gohir.A05G156000 Gossypium hirsutum HOM05D005954 ORTHO05D007347 1.5e-41 173.3 157 69.4
QL05p046336 Quercus lobata HOM05D005954 ORTHO05D007347 1.9e-41 172.9 131 76.3
Cpa.g.sc7.59 Carica papaya HOM05D005954 ORTHO05D007347 2.5e-41 172.6 160 68.8
Gorai.009G163700 Gossypium raimondii HOM05D005954 ORTHO05D007347 4.3e-41 171.8 157 68.8
Gohir.D05G158700 Gossypium hirsutum HOM05D005954 ORTHO05D007347 7.4e-41 171.0 157 68.2
Gohir.A06G134004 Gossypium hirsutum HOM05D005954 ORTHO05D007347 9.6e-41 170.6 132 75.8
Gohir.D06G136500 Gossypium hirsutum HOM05D005954 ORTHO05D007347 1.3e-40 170.2 133 75.2
Gorai.010G158700 Gossypium raimondii HOM05D005954 ORTHO05D007347 1.3e-40 170.2 133 75.2
GSVIVG01021193001 Vitis vinifera HOM05D005954 ORTHO05D007347 1.6e-40 169.9 109 84.4
FAN11G0799 Fragaria x ananassa HOM05D005954 ORTHO05D007347 2.1e-40 169.5 146 72.6
TAR626G1287 Trochodendron aralioides HOM05D005954 ORTHO05D007347 2.1e-40 169.5 156 70.5
Atru.chr10.1690 Acer truncatum HOM05D005954 ORTHO05D007347 2.8e-40 169.1 157 70.1
RcHm_v2.0_Chr5g0010351 Rosa chinensis HOM05D005954 ORTHO05D007347 6.2e-40 167.9 146 71.2
Ciclev10017015m.g Citrus clementina HOM05D005954 ORTHO05D007347 5.3e-39 164.9 160 66.9
Sed0006910 Sechium edule HOM05D005954 ORTHO05D007347 6.9e-39 164.5 154 66.2
Duzib160G0806 Durio zibethinus HOM05D005954 ORTHO05D007347 1.7e-37 159.8 157 66.2
MD10G1282300 Malus domestica HOM05D005954 ORTHO05D007347 2.2e-37 159.5 155 65.2
CSS0014251 Camellia sinensis var. sinensis HOM05D005954 ORTHO05D007347 6.5e-37 157.9 135 69.6
Cfa000593 Carpinus fangiana HOM05D005954 ORTHO05D007347 4.2e-36 155.2 160 60.0
Glyma.15G082000 Glycine max HOM05D005954 ORTHO05D007347 1.6e-35 153.3 131 71.8
Phvul.006G176900 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 1.6e-35 153.3 132 68.2
Phvul.006G176980 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 1.6e-35 153.3 132 68.2
Glyma.13G230600 Glycine max HOM05D005954 ORTHO05D007347 2.1e-35 152.9 131 71.0
PSO541G3988 Papaver somniferum HOM05D005954 ORTHO05D007347 2.1e-35 152.9 156 64.1
PGR004G0539 Punica granatum HOM05D005954 ORTHO05D007347 4.6e-35 151.8 158 62.7
PGR004G0737 Punica granatum HOM05D005954 ORTHO05D007347 4.6e-35 151.8 158 62.7
AUR62036591 Chenopodium quinoa HOM05D005954 ORTHO05D007347 1.8e-34 149.8 160 65.6
CDE05G1458 Ceratophyllum demersum HOM05D005954 ORTHO05D007347 2.3e-34 149.4 162 63.6
AUR62031174 Chenopodium quinoa HOM05D005954 ORTHO05D007347 2.3e-34 149.4 133 72.2
Ah.09g233660 Amaranthus hybridus HOM05D005954 ORTHO05D007347 5.1e-34 148.3 132 73.5
MSTRG.14726 Avicennia marina HOM05D005954 ORTHO05D007347 5.1e-34 148.3 133 69.2
PSO675G5672 Papaver somniferum HOM05D005954 ORTHO05D007347 5.1e-34 148.3 156 62.8
arahy.Tifrunner.gnm1.ann1.N07IEU Arachis hypogaea HOM05D005954 ORTHO05D007347 1.5e-33 146.7 148 64.2
Aqoxy1G03187 Aquilegia oxysepala HOM05D005954 ORTHO05D007347 9.7e-33 144.1 143 62.9
EL10Ac8g20509 Beta vulgaris HOM05D005954 ORTHO05D007347 1.3e-32 143.7 138 70.3
Thhalv10008967m.g Eutrema salsugineum HOM05D005954 ORTHO05D007347 2.2e-32 142.9 159 61.6
Peaxi162Scf00061g00155 Petunia axillaris HOM05D005954 ORTHO05D007347 2.2e-32 142.9 134 65.7
TPR.G11659 Trifolium pratense HOM05D005954 ORTHO05D007347 2.2e-32 142.9 134 67.2
C03p75510 Brassica napus HOM05D005954 ORTHO05D007347 3.7e-32 142.1 158 63.9
A08p25330 Brassica napus HOM05D005954 ORTHO05D007347 6.3e-32 141.4 163 63.2
BraA08t34485Z Brassica rapa HOM05D005954 ORTHO05D007347 6.3e-32 141.4 163 63.2
CiPaw.09G068600 Carya illinoinensis HOM05D005954 ORTHO05D007347 6.3e-32 141.4 162 56.8
Nitab4.5_0004274g0040 Nicotiana tabacum HOM05D005954 ORTHO05D007347 6.3e-32 141.4 137 65.7
Nitab4.5_0000117g0150 Nicotiana tabacum HOM05D005954 ORTHO05D007347 8.2e-32 141.0 137 65.7
Eucgr.D00519 Eucalyptus grandis HOM05D005954 ORTHO05D007347 1.1e-31 140.6 162 61.7
BcaC05g26922 Brassica carinata HOM05D005954 ORTHO05D007347 1.8e-31 139.8 160 63.8
BcaNung06433 Brassica carinata HOM05D005954 ORTHO05D007347 1.8e-31 139.8 157 63.1
A09p37340 Brassica napus HOM05D005954 ORTHO05D007347 1.8e-31 139.8 160 62.5
C05p27750 Brassica napus HOM05D005954 ORTHO05D007347 1.8e-31 139.8 160 63.8
BolC5t31496H Brassica oleracea HOM05D005954 ORTHO05D007347 1.8e-31 139.8 160 63.8
BraA09t39243Z Brassica rapa HOM05D005954 ORTHO05D007347 1.8e-31 139.8 160 62.5
Solyc01g056780.3 Solanum lycopersicum HOM05D005954 ORTHO05D007347 1.8e-31 139.8 135 65.2
BolC3t19807H Brassica oleracea HOM05D005954 ORTHO05D007347 2.4e-31 139.4 160 61.2
MD16G1032000 Malus domestica HOM05D005954 ORTHO05D007347 4.1e-31 138.7 152 56.6
Medtr2g015790 Medicago truncatula HOM05D005954 ORTHO05D007347 6.9e-31 137.9 111 73.9
BcaB07g32486 Brassica carinata HOM05D005954 ORTHO05D007347 1.5e-30 136.7 164 61.0
BcaNung06755 Brassica carinata HOM05D005954 ORTHO05D007347 1.5e-30 136.7 158 63.3
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 1.5e-30 136.7 118 73.7
MD10G1067400 Malus domestica HOM05D005954 ORTHO05D007347 2.6e-30 136.0 144 57.6
arahy.Tifrunner.gnm1.ann1.YBYE48 Arachis hypogaea HOM05D005954 ORTHO05D007347 3.4e-30 135.6 135 68.1
C07p16610 Brassica napus HOM05D005954 ORTHO05D007347 3.4e-30 135.6 158 61.4
AL1G42790 Arabidopsis lyrata HOM05D005954 ORTHO05D007347 4.5e-30 135.2 159 60.4
CARHR028290 Cardamine hirsuta HOM05D005954 ORTHO05D007347 4.5e-30 135.2 131 67.9
Migut.H01450 Erythranthe guttata HOM05D005954 ORTHO05D007347 4.5e-30 135.2 146 59.6
MD05G1303200 Malus domestica HOM05D005954 ORTHO05D007347 5.9e-30 134.8 152 57.2
Sp1g25010 Schrenkiella parvula HOM05D005954 ORTHO05D007347 5.9e-30 134.8 159 60.4
Carub.0001s2727 Capsella rubella HOM05D005954 ORTHO05D007347 1.0e-29 134.0 159 60.4
PGSC0003DMG400021493 Solanum tuberosum HOM05D005954 ORTHO05D007347 1.0e-29 134.0 135 63.7
Lj6g0020578 Lotus japonicus HOM05D005954 ORTHO05D007347 1.7e-29 133.3 155 61.3
SalBow8G3893 Salvia bowleyana HOM05D005954 ORTHO05D007347 1.7e-29 133.3 138 61.6
Cc02_g14660 Coffea canephora HOM05D005954 ORTHO05D007347 2.2e-29 132.9 138 64.5
THA.LOC104820590 Tarenaya hassleriana HOM05D005954 ORTHO05D007347 3.8e-29 132.1 158 60.1
DCAR_007962 Daucus carota HOM05D005954 ORTHO05D007347 5.0e-29 131.7 131 64.9
Hund23979 Selenicereus undatus HOM05D005954 ORTHO05D007347 1.1e-28 130.6 159 60.4
Aa31LG5G21180 Aethionema arabicum HOM05D005954 ORTHO05D007347 1.4e-28 130.2 162 59.3
AT1G29070 Arabidopsis thaliana HOM05D005954 ORTHO05D007347 1.4e-28 130.2 159 58.5
Psat1g199440 Pisum sativum HOM05D005954 ORTHO05D007347 1.4e-28 130.2 132 65.9
Lsat_1_v5_gn_7_23061 Lactuca sativa HOM05D005954 ORTHO05D007347 3.2e-28 129.0 144 63.2
MBI13_g00561_MAGBIO Magnolia biondii HOM05D005954 ORTHO05D007347 3.2e-28 129.0 139 64.7
arahy.Tifrunner.gnm1.ann1.69550A Arachis hypogaea HOM05D005954 ORTHO05D007347 7.2e-28 127.9 137 62.8
HanXRQChr04g0116001 Helianthus annuus HOM05D005954 ORTHO05D007347 1.3e-26 123.6 142 61.3
Ca_00467_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 1.8e-26 123.2 94 76.6
Ca_30955_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 1.8e-26 123.2 94 76.6
Sopen01g025250 Solanum pennellii HOM05D005954 ORTHO05D007347 1.8e-26 123.2 138 62.3
ATR0602G014 Amborella trichopoda HOM05D005954 ORTHO05D007347 3.0e-26 122.5 155 54.8
SGA_v2.0_scaffold1G00032 Striga asiatica HOM05D005954 ORTHO05D007347 3.9e-26 122.1 161 55.3
Lj1P1194T69 Lonicera japonica HOM05D005954 ORTHO05D007347 1.1e-25 120.6 86 77.9
COL.COLO4_31320 Corchorus olitorius HOM05D005954 ORTHO05D007347 2.5e-25 119.4 78 82.1
ECA236G0551 Erigeron canadensis HOM05D005954 ORTHO05D007347 1.4e-23 113.6 139 58.3
MD16G1032400 Malus domestica HOM05D005954 ORTHO05D007347 1.4e-23 113.6 104 66.3
Rhsim13G0191500 Rhododendron simsii HOM05D005954 ORTHO05D007347 1.4e-23 113.6 133 57.9
vmacro01548 Vaccinium macrocarpon HOM05D005954 ORTHO05D007347 1.4e-23 113.6 138 58.0
Atru.chr10.1684 Acer truncatum HOM05D005954 ORTHO05D007347 4.1e-23 112.1 79 78.5
HPP92_016045 Vanilla planifolia HOM05D005954 ORTHO05D007347 4.5e-22 108.6 91 72.5
Oeu001090.1 Olea europaea HOM05D005954 ORTHO05D007347 7.7e-22 107.8 105 63.8
unitig_22.g6753 Utricularia gibba HOM05D005954 ORTHO05D007347 8.5e-21 104.4 139 55.4
Zm00001eb150530 Zea mays HOM05D005954 ORTHO05D007347 3.2e-20 102.4 176 47.2
CAN.G889.12 Capsicum annuum HOM05D005954 ORTHO05D007347 4.2e-20 102.1 149 51.0
Sc05g0007180 Simmondsia chinensis HOM05D005954 ORTHO05D007347 9.4e-20 100.9 78 73.1
BcaC06g35397 Brassica carinata HOM05D005954 ORTHO05D007347 1.2e-19 100.5 158 51.9
Os01g0805000 Oryza sativa ssp. japonica HOM05D005954 ORTHO05D007347 3.6e-19 99.0 158 46.8
Lalb_Chr20g0121221 Lupinus albus HOM05D005954 ORTHO05D007347 1.8e-18 96.7 161 49.1
MD16G1032600 Malus domestica HOM05D005954 ORTHO05D007347 3.7e-16 89.0 127 48.8
CARHR028330 Cardamine hirsuta HOM05D005954 ORTHO05D007347 1.9e-12 76.6 56 76.8
AagrBONN_evm.TU.Sc2ySwM_117.1983 Anthoceros agrestis HOM05D005954 ORTHO05D007347 3.2e-12 75.9 109 53.2
CBR_g29683 Chara braunii HOM05D005954 ORTHO05D007347 3.2e-12 75.9 102 51.0
Pp3c21_6450 Physcomitrium patens HOM05D005954 ORTHO05D007347 5.5e-12 75.1 136 50.7
Pp3c18_19220 Physcomitrium patens HOM05D005954 ORTHO05D007347 2.1e-11 73.2 129 47.3
SEGI_22528 Sequoiadendron giganteum HOM05D005954 ORTHO05D007347 2.1e-11 73.2 89 58.4
Mapoly0043s0046 Marchantia polymorpha HOM05D005954 ORTHO05D007347 3.0e-10 69.3 114 51.8
Nn3g19836 Nelumbo nucifera HOM05D005954 ORTHO05D007347 7.0e-07 58.2 43 74.4


User provided reference genes

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