Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G062200 Populus trichocarpa HOM05D007006 ORTHO05D008925 3.2e-110 401.7 202 100.0
Sabra11G0042600 Salix brachista HOM05D007006 ORTHO05D008925 3.0e-100 368.6 215 88.4
Sabra11G0044100 Salix brachista HOM05D007006 ORTHO05D008925 3.0e-100 368.6 215 88.4
Gohir.A10G029300 Gossypium hirsutum HOM05D007006 ORTHO05D008925 4.2e-78 295.0 192 78.1
Gohir.D10G029800 Gossypium hirsutum HOM05D007006 ORTHO05D008925 9.5e-78 293.9 192 77.6
Gorai.011G031700 Gossypium raimondii HOM05D007006 ORTHO05D008925 9.5e-78 293.9 192 77.6
Manes.16G034601 Manihot esculenta HOM05D007006 ORTHO05D008925 1.2e-77 293.5 174 84.5
Duzib160G0118 Durio zibethinus HOM05D007006 ORTHO05D008925 1.6e-77 293.1 192 77.6
COL.COLO4_31384 Corchorus olitorius HOM05D007006 ORTHO05D008976 2.1e-77 292.7 160 89.4
Thecc.06G177200 Theobroma cacao HOM05D007006 ORTHO05D008925 3.6e-77 292.0 198 77.3
Eucgr.E03165 Eucalyptus grandis HOM05D007006 ORTHO05D008925 4.0e-76 288.5 179 79.9
Atru.chr10.1745 Acer truncatum HOM05D007006 ORTHO05D008925 2.0e-75 286.2 193 74.6
BraA01t00989Z Brassica rapa HOM05D007006 ORTHO05D008925 2.4e-73 279.3 160 82.5
THA.LOC104798412 Tarenaya hassleriana HOM05D007006 ORTHO05D008925 5.4e-73 278.1 158 84.2
CiPaw.10G055000 Carya illinoinensis HOM05D007006 ORTHO05D008925 7.0e-73 277.7 186 75.8
MD10G1285600 Malus domestica HOM05D007006 ORTHO05D008925 1.2e-72 276.9 160 83.8
Carub.0007s2277 Capsella rubella HOM05D007006 ORTHO05D008925 2.0e-72 276.2 158 82.9
Prupe.4G056000 Prunus persica HOM05D007006 ORTHO05D008925 4.5e-72 275.0 164 82.9
TWI63G0680 Tripterygium wilfordii HOM05D007006 ORTHO05D008925 4.5e-72 275.0 192 74.5
Aa31LG6G1200 Aethionema arabicum HOM05D007006 ORTHO05D008925 5.9e-72 274.6 163 81.0
BcaC09g51505 Brassica carinata HOM05D007006 ORTHO05D008925 5.9e-72 274.6 162 81.5
BolC1t01215H Brassica oleracea HOM05D007006 ORTHO05D008925 5.9e-72 274.6 161 82.0
RcHm_v2.0_Chr5g0009821 Rosa chinensis HOM05D007006 ORTHO05D008925 1.0e-71 273.9 192 74.5
CARHR225300 Cardamine hirsuta HOM05D007006 ORTHO05D008925 1.3e-71 273.5 163 81.0
Haze_06320 Corylus avellana HOM05D007006 ORTHO05D008925 1.3e-71 273.5 191 74.9
Thhalv10026439m.g Eutrema salsugineum HOM05D007006 ORTHO05D008925 2.9e-71 272.3 154 83.1
Sp7g15560 Schrenkiella parvula HOM05D007006 ORTHO05D008925 2.9e-71 272.3 158 82.9
TAR626G0127 Trochodendron aralioides HOM05D007006 ORTHO05D008925 3.9e-71 271.9 157 84.1
AL7G35820 Arabidopsis lyrata HOM05D007006 ORTHO05D008925 1.1e-70 270.4 154 82.5
CsaV3_1G012640 Cucumis sativus L. HOM05D007006 ORTHO05D008925 1.1e-70 270.4 192 72.4
GSVIVG01021151001 Vitis vinifera HOM05D007006 ORTHO05D008925 1.1e-70 270.4 157 82.2
PSO210G2152 Papaver somniferum HOM05D007006 ORTHO05D008925 1.9e-70 269.6 190 71.1
AT4G18460 Arabidopsis thaliana HOM05D007006 ORTHO05D008925 2.5e-70 269.2 153 83.0
CSS0027125 Camellia sinensis var. sinensis HOM05D007006 ORTHO05D008925 7.3e-70 267.7 157 79.0
Actinidia07621 Actinidia chinensis HOM05D007006 ORTHO05D008925 9.5e-70 267.3 157 80.3
Nn1g04307 Nelumbo nucifera HOM05D007006 ORTHO05D008925 1.6e-69 266.5 153 81.7
MSTRG.7381 Avicennia marina HOM05D007006 ORTHO05D008925 2.1e-69 266.2 159 81.1
BcaNung05874 Brassica carinata HOM05D007006 ORTHO05D008925 8.0e-69 264.2 161 77.6
Oeu001091.1 Olea europaea HOM05D007006 ORTHO05D008925 1.4e-68 263.5 163 78.5
Sed0005765 Sechium edule HOM05D007006 ORTHO05D008925 1.4e-68 263.5 193 69.4
TPR.G31857 Trifolium pratense HOM05D007006 ORTHO05D008925 2.3e-68 262.7 164 78.7
Dinv17375 Davidia involucrata HOM05D007006 ORTHO05D008925 3.1e-68 262.3 160 80.6
Migut.M01077 Erythranthe guttata HOM05D007006 ORTHO05D008925 5.2e-68 261.5 160 81.9
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 8.9e-68 260.8 162 77.8
Nitab4.5_0000376g0100 Nicotiana tabacum HOM05D007006 ORTHO05D008925 4.4e-67 258.5 153 79.7
ATR0602G073 Amborella trichopoda HOM05D007006 ORTHO05D008925 5.8e-67 258.1 157 80.9
Sopen02g022230 Solanum pennellii HOM05D007006 ORTHO05D008925 5.8e-67 258.1 153 81.0
PGSC0003DMG400010717 Solanum tuberosum HOM05D007006 ORTHO05D008925 5.8e-67 258.1 153 81.0
Solyc02g077310.4 Solanum lycopersicum HOM05D007006 ORTHO05D008925 7.5e-67 257.7 153 81.0
FAN21G1832 Fragaria x ananassa HOM05D007006 ORTHO05D008925 9.8e-67 257.3 156 82.7
Lj6g0023400 Lotus japonicus HOM05D007006 ORTHO05D008925 1.3e-66 256.9 158 79.7
Rhsim02G0152900 Rhododendron simsii HOM05D007006 ORTHO05D008925 1.3e-66 256.9 158 79.7
Hma1.2p1_0155F.1_g068540 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 4.9e-66 255.0 152 80.9
SalBow8G1160 Salvia bowleyana HOM05D007006 ORTHO05D008925 6.4e-66 254.6 154 78.6
Phvul.006G179400 Phaseolus vulgaris HOM05D007006 ORTHO05D008925 1.1e-65 253.8 162 76.5
CANSAT35G1771 Cannabis sativa HOM05D007006 ORTHO05D008925 3.2e-65 252.3 151 78.8
FvH4_3g08260 Fragaria vesca HOM05D007006 ORTHO05D008925 3.2e-65 252.3 170 75.9
VMungo0540G0068 Vigna mungo HOM05D007006 ORTHO05D008925 3.2e-65 252.3 162 75.3
CAN.G79.66 Capsicum annuum HOM05D007006 ORTHO05D008925 4.1e-65 251.9 153 77.1
MELO3C002631.2 Cucumis melo HOM05D007006 ORTHO05D008925 5.4e-65 251.5 195 69.2
Nitab4.5_0011727g0040 Nicotiana tabacum HOM05D007006 ORTHO05D008925 5.4e-65 251.5 161 76.4
Glyma.15G079600 Glycine max HOM05D007006 ORTHO05D008925 7.0e-65 251.1 150 80.7
Zm00001eb122370 Zea mays HOM05D007006 ORTHO05D008925 7.0e-65 251.1 148 79.7
Sc05g0007280 Simmondsia chinensis HOM05D007006 ORTHO05D008925 1.2e-64 250.4 159 78.0
FAN11G3635 Fragaria x ananassa HOM05D007006 ORTHO05D008925 1.6e-64 250.0 168 76.2
FAN16G3644 Fragaria x ananassa HOM05D007006 ORTHO05D008925 1.6e-64 250.0 168 76.2
Psat1g148320 Pisum sativum HOM05D007006 ORTHO05D008925 2.0e-64 249.6 160 76.9
Glyma.13G233500 Glycine max HOM05D007006 ORTHO05D008925 2.7e-64 249.2 150 80.0
Os01g0242500 Oryza sativa ssp. japonica HOM05D007006 ORTHO05D008925 4.6e-64 248.4 163 73.6
CDE02G4743 Ceratophyllum demersum HOM05D007006 ORTHO05D008925 1.3e-63 246.9 160 76.9
Ca_11669_v3 Cicer arietinum L. HOM05D007006 ORTHO05D008925 2.3e-63 246.1 155 78.7
HanXRQChr01g0008471 Helianthus annuus HOM05D007006 ORTHO05D008925 6.6e-63 244.6 170 70.6
SEGI_08558 Sequoiadendron giganteum HOM05D007006 ORTHO05D008925 1.9e-62 243.0 164 72.6
ECA248G3223 Erigeron canadensis HOM05D007006 ORTHO05D008925 7.3e-62 241.1 157 72.6
A01p10430 Brassica napus HOM05D007006 ORTHO05D008925 1.6e-61 240.0 161 73.3
Eucgr.E02654 Eucalyptus grandis HOM05D007006 ORTHO05D008925 8.0e-61 237.7 138 83.3
Medtr2g036040 Medicago truncatula HOM05D007006 ORTHO05D008925 1.8e-60 236.5 166 72.9
HPP92_002943 Vanilla planifolia HOM05D007006 ORTHO05D008925 1.8e-60 236.5 161 72.7
C01p12410 Brassica napus HOM05D007006 ORTHO05D008925 1.2e-59 233.8 162 71.6
Cc02_g14310 Coffea canephora HOM05D007006 ORTHO05D008925 2.0e-59 233.0 138 79.7
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 9.8e-59 230.7 162 71.6
ClCG03G007950 Citrullus lanatus HOM05D007006 ORTHO05D008925 2.9e-58 229.2 243 53.9
Pp3c2_4790 Physcomitrium patens HOM05D007006 ORTHO05D008925 1.1e-57 227.3 140 76.4
Mapoly0096s0066 Marchantia polymorpha HOM05D007006 ORTHO05D008925 1.4e-57 226.9 152 69.7
Lj1A1197T80 Lonicera japonica HOM05D007006 ORTHO05D008925 1.9e-57 226.5 156 72.4
Cpa.g.sc7.31 Carica papaya HOM05D007006 ORTHO05D008925 2.4e-57 226.1 157 73.2
SGA_v2.0_scaffold309G48148 Striga asiatica HOM05D007006 ORTHO05D008925 4.6e-56 221.9 221 57.5
Ciclev10016962m.g Citrus clementina HOM05D007006 ORTHO05D008925 6.0e-56 221.5 124 84.7
CBR_g12914 Chara braunii HOM05D007006 ORTHO05D008925 7.8e-56 221.1 158 65.8
SMO356G0615 Selaginella moellendorffii HOM05D007006 ORTHO05D008925 7.8e-56 221.1 159 64.8
Hund21193 Selenicereus undatus HOM05D007006 ORTHO05D008925 7.8e-56 221.1 140 76.4
Hma1.2p1_0155F.1_g068550 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 3.3e-54 215.7 157 70.7
CBR_g28086 Chara braunii HOM05D007006 ORTHO05D008925 4.7e-53 211.8 158 63.3
Cfa000555 Carpinus fangiana HOM05D007006 ORTHO05D008925 1.6e-48 196.8 203 59.1
AUR62031124 Chenopodium quinoa HOM05D007006 ORTHO05D008925 3.0e-47 192.6 155 64.5
EL10Ac8g20473 Beta vulgaris HOM05D007006 ORTHO05D008925 6.6e-47 191.4 159 62.9
AUR62014917 Chenopodium quinoa HOM05D007006 ORTHO05D008925 6.8e-44 181.4 153 62.1
DCAR_004029 Daucus carota HOM05D007006 ORTHO05D008925 3.8e-42 175.6 107 74.8
Lsat_1_v5_gn_1_120360 Lactuca sativa HOM05D007006 ORTHO05D008925 9.3e-41 171.0 108 70.4
RcHm_v2.0_Chr5g0007981 Rosa chinensis HOM05D007006 ORTHO05D008925 1.6e-40 170.2 124 70.2
PSO832G1055 Papaver somniferum HOM05D007006 ORTHO05D008925 9.6e-38 161.0 163 55.8
Peaxi162Scf00875g00318 Petunia axillaris HOM05D007006 ORTHO05D008925 9.6e-38 161.0 117 66.7
Cre12.g542000 Chlamydomonas reinhardtii HOM05D007006 ORTHO05D008925 1.1e-36 157.5 150 52.7
PGR042G2307 Punica granatum HOM05D007006 ORTHO05D008925 4.0e-36 155.6 89 82.0
MBI06_g25712_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 9.0e-36 154.5 93 81.7
MCO06G160 Micromonas commoda HOM05D007006 ORTHO05D008925 2.0e-35 153.3 162 51.2
PRCOL_00003508 Prasinoderma coloniale HOM05D007006 ORTHO05D008925 8.7e-31 137.9 149 49.7
Haze_27122 Corylus avellana HOM05D007006 ORTHO05D008925 1.1e-30 137.5 148 43.2
Lalb_Chr20g0121401 Lupinus albus HOM05D007006 ORTHO05D008925 4.0e-28 129.0 79 70.9
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 1.8e-20 103.6 82 58.5
SGA_v2.0_scaffold309G48132 Striga asiatica HOM05D007006 ORTHO05D008925 3.8e-18 95.9 168 41.1
Actinidia39491 Actinidia chinensis HOM05D007006 ORTHO05D008925 2.1e-13 80.1 79 55.7
MBI06_g25714_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 7.6e-11 71.6 42 81.0


User provided reference genes

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