Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 1.0e-111 407.1 263 100.0
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 6.5e-71 271.6 288 67.0
Sabra11G0039600 Salix brachista HOM05D007160 ORTHO05D005331 4.7e-69 265.4 267 65.9
Sabra04G0030300 Salix brachista HOM05D007160 ORTHO05D005331 2.2e-58 229.9 291 58.1
Manes.17G049000 Manihot esculenta HOM05D007160 ORTHO05D005331 1.6e-32 144.1 300 48.3
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 1.1e-30 137.9 277 40.4
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 7.6e-27 125.2 238 43.3
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 6.4e-26 122.1 264 39.0
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 8.4e-26 121.7 277 38.6
Manes.16G031700 Manihot esculenta HOM05D007160 ORTHO05D005331 3.2e-25 119.8 298 35.9
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 7.1e-25 118.6 268 38.1
Ciclev10016200m.g Citrus clementina HOM05D007160 ORTHO05D005331 2.5e-22 110.2 267 39.3
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 1.3e-21 107.8 270 38.5
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 2.1e-21 107.1 253 41.5
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 6.9e-20 102.1 268 34.3
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 3.2e-17 93.2 320 34.4
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 7.1e-17 92.0 249 35.3
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 4.6e-16 89.4 227 36.6
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 1.0e-15 88.2 342 30.1
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 1.0e-15 88.2 266 32.3
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 2.3e-15 87.0 212 38.2
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 3.0e-15 86.7 256 35.2
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 5.1e-15 85.9 308 30.2
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 5.1e-15 85.9 251 37.8
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 8.7e-15 85.1 304 32.2
Thecc.06G181500 Theobroma cacao HOM05D007160 ORTHO05D005331 8.7e-15 85.1 178 38.2
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 1.1e-14 84.7 170 39.4
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 1.1e-14 84.7 249 33.7
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 1.9e-14 84.0 95 56.8
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 1.9e-14 84.0 226 33.2
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 2.5e-14 83.6 298 33.9
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 1.6e-13 80.9 197 38.6
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 1.6e-13 80.9 197 38.6
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 1.6e-13 80.9 186 38.2
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 4.8e-13 79.3 226 38.9
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 8.1e-13 78.6 273 35.2
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 8.1e-13 78.6 273 35.2
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 1.1e-12 78.2 258 31.0
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 1.8e-12 77.4 252 37.3
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 1.8e-12 77.4 219 31.1
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 3.1e-12 76.6 359 27.6
CANSAT35G1941 Cannabis sativa HOM05D007160 ORTHO05D005331 5.3e-12 75.9 238 34.5
arahy.Tifrunner.gnm1.ann1.AUV6LD Arachis hypogaea HOM05D007160 ORTHO05D005331 6.9e-12 75.5 234 35.9
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 6.9e-12 75.5 110 43.6
CARHR027910 Cardamine hirsuta HOM05D009159 ORTHO05D005331 9.0e-12 75.1 241 30.3
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 9.0e-12 75.1 245 33.1
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 9.0e-12 75.1 315 32.4
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 2.6e-11 73.6 225 37.8
AL1G42030 Arabidopsis lyrata HOM05D009159 ORTHO05D005331 3.4e-11 73.2 266 28.9
CARHR128000 Cardamine hirsuta HOM05D009159 ORTHO05D005331 3.4e-11 73.2 227 31.3
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 3.4e-11 73.2 244 31.1
Sc17g0005960 Simmondsia chinensis HOM05D028926 ORTHO05D005331 7.6e-11 72.0 228 30.3
Thhalv10008366m.g Eutrema salsugineum HOM05D009159 ORTHO05D005331 1.7e-10 70.9 219 30.1
C03p75110 Brassica napus HOM05D009159 ORTHO05D005331 2.2e-10 70.5 207 30.9
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 2.2e-10 70.5 221 32.1
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 2.9e-10 70.1 306 30.4
Sp4g16260 Schrenkiella parvula HOM05D009159 ORTHO05D005331 3.8e-10 69.7 241 30.7
BcaC01g00047 Brassica carinata HOM05D009159 ORTHO05D005331 4.9e-10 69.3 208 32.2
BcaB03g12106 Brassica carinata HOM05D009159 ORTHO05D005331 6.4e-10 68.9 224 33.5
BolC3t19771H Brassica oleracea HOM05D009159 ORTHO05D005331 6.4e-10 68.9 208 32.2
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 6.4e-10 68.9 108 45.4
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 6.4e-10 68.9 108 45.4
THA.LOC104820566 Tarenaya hassleriana HOM05D009159 ORTHO05D005331 6.4e-10 68.9 215 31.6
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 8.4e-10 68.6 94 46.8
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 1.1e-09 68.2 283 30.7
Gohir.A05G159300 Gossypium hirsutum HOM05D007160 ORTHO05D005331 1.4e-09 67.8 170 34.1
PSO832G0372 Papaver somniferum HOM05D025247 ORTHO05D050219 1.9e-09 67.4 261 30.7
ECA236G4287 Erigeron canadensis HOM05D007160 ORTHO05D005331 3.2e-09 66.6 267 31.8
Prupe.4G052000 Prunus persica HOM05D007160 ORTHO05D005331 3.2e-09 66.6 108 44.4
A08p25580 Brassica napus HOM05D009159 ORTHO05D005331 4.2e-09 66.2 213 31.0
BraA08t34510Z Brassica rapa HOM05D009159 ORTHO05D005331 4.2e-09 66.2 213 31.0
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 4.2e-09 66.2 334 26.6
Thhalv10017182m.g Eutrema salsugineum HOM05D009159 ORTHO05D005331 5.5e-09 65.9 235 31.9
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 7.1e-09 65.5 274 31.8
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 7.1e-09 65.5 191 40.8
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 7.1e-09 65.5 196 37.2
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.1e-08 63.9 101 46.5
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 2.7e-08 63.5 143 37.8
PSO210G1528 Papaver somniferum HOM05D025247 ORTHO05D050219 2.7e-08 63.5 250 29.6
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 2.7e-08 63.5 95 42.1
Medtr2g090660 Medicago truncatula HOM05D008876 ORTHO05D010747 3.5e-08 63.2 225 31.6
Sc06g0009300 Simmondsia chinensis HOM05D025247 ORTHO05D026483 3.5e-08 63.2 236 29.2
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 3.5e-08 63.2 201 32.8
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 6.0e-08 62.4 119 42.0
Sed0008189 Sechium edule HOM05D007160 ORTHO05D005331 6.0e-08 62.4 283 39.9
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 7.9e-08 62.0 229 29.7
MELO3C007263.2 Cucumis melo HOM05D007160 ORTHO05D005331 7.9e-08 62.0 316 30.4
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 7.9e-08 62.0 178 40.4
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 7.9e-08 62.0 112 44.6
BcaB07g32463 Brassica carinata HOM05D009159 ORTHO05D005331 1.0e-07 61.6 236 28.8
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.0e-07 61.6 118 42.4
Nitab4.5_0006098g0020 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.0e-07 61.6 78 44.9
BcaB03g13928 Brassica carinata HOM05D009159 ORTHO05D005331 1.3e-07 61.2 232 31.9
Sp1g24680 Schrenkiella parvula HOM05D009159 ORTHO05D005331 1.3e-07 61.2 214 30.8
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.8e-07 60.8 108 43.5
Aqoxy4G00632 Aquilegia oxysepala HOM05D018497 ORTHO05D021348 3.0e-07 60.1 328 27.7
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 3.0e-07 60.1 93 41.9
Nitab4.5_0001955g0170 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.9e-07 59.7 213 31.5
Sc23g0001700 Simmondsia chinensis HOM05D028926 ORTHO05D005331 3.9e-07 59.7 224 30.8
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 6.7e-07 58.9 119 38.7
AT2G33850 Arabidopsis thaliana HOM05D009159 ORTHO05D005331 8.7e-07 58.5 245 31.0
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 8.7e-07 58.5 373 24.4
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 8.7e-07 58.5 225 29.8
Nitab4.5_0003341g0030 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.1e-06 58.2 84 39.3
CSS0024231 Camellia sinensis var. sinensis HOM05D007160 ORTHO05D005331 1.5e-06 57.8 232 40.1
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 1.5e-06 57.8 289 28.7
MD10G1289700 Malus domestica HOM05D007160 ORTHO05D005331 2.5e-06 57.0 116 34.5
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 2.5e-06 57.0 248 27.8
CsaV3_6G050380 Cucumis sativus L. HOM05D007160 ORTHO05D005331 3.3e-06 56.6 318 31.1
Dinv01518 Davidia involucrata HOM05D008876 ORTHO05D010747 3.3e-06 56.6 225 32.9
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 3.3e-06 56.6 102 42.2
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 3.3e-06 56.6 248 27.8
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 4.3e-06 56.2 100 43.0


User provided reference genes

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