Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G057400 Populus trichocarpa HOM05D007507 ORTHO05D009420 1.6e-71 272.7 141 100.0
Sabra11G0039300 Salix brachista HOM05D007507 ORTHO05D009420 5.4e-64 247.7 141 89.4
Potri.004G048201 Populus trichocarpa HOM05D007507 ORTHO05D009420 3.5e-63 245.0 141 89.4
Sabra04G0030100 Salix brachista HOM05D007507 ORTHO05D009420 8.1e-60 233.8 136 88.2
Manes.16G031300 Manihot esculenta HOM05D007507 ORTHO05D009420 1.1e-40 170.2 144 65.3
Manes.17G048900 Manihot esculenta HOM05D007507 ORTHO05D009420 1.5e-37 159.8 138 67.4
Thecc.06G181600 Theobroma cacao HOM05D007507 ORTHO05D009420 1.5e-37 159.8 145 61.4
GSVIVG01021107001 Vitis vinifera HOM05D007507 ORTHO05D009420 7.4e-37 157.5 145 60.7
MD05G1310700 Malus domestica HOM05D007507 ORTHO05D009420 1.6e-36 156.4 142 62.0
TAR626G1744 Trochodendron aralioides HOM05D007507 ORTHO05D009420 3.1e-35 152.1 135 61.5
Dinv40597 Davidia involucrata HOM05D007507 ORTHO05D009420 1.5e-34 149.8 151 58.3
CiPaw.10G052300 Carya illinoinensis HOM05D007507 ORTHO05D009420 2.0e-34 149.4 144 61.1
Duzib235G0685 Durio zibethinus HOM05D007507 ORTHO05D009420 3.4e-34 148.7 144 59.0
Glyma.07G201000 Glycine max HOM05D007507 ORTHO05D009420 7.6e-34 147.5 141 56.0
Dinv17350 Davidia involucrata HOM05D007507 ORTHO05D009420 2.9e-33 145.6 145 57.2
QL05p042078 Quercus lobata HOM05D007507 ORTHO05D009420 8.5e-33 144.1 133 60.2
Glyma.13G175400 Glycine max HOM05D007507 ORTHO05D009420 1.4e-32 143.3 141 55.3
VMungo0251G0526 Vigna mungo HOM05D007507 ORTHO05D009420 5.5e-32 141.4 137 54.7
Actinidia16570 Actinidia chinensis HOM05D007507 ORTHO05D009420 1.6e-31 139.8 146 55.5
Duzib192G0611 Durio zibethinus HOM05D007507 ORTHO05D009420 1.6e-31 139.8 145 55.9
MD10G1289800 Malus domestica HOM05D007507 ORTHO05D009420 2.1e-31 139.4 138 58.0
Gohir.A05G159400 Gossypium hirsutum HOM05D007507 ORTHO05D009420 2.7e-31 139.0 145 57.2
Phvul.002G232000 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 2.3e-30 136.0 134 57.5
Actinidia05654 Actinidia chinensis HOM05D007507 ORTHO05D009420 3.0e-30 135.6 145 53.8
Gohir.D05G162100 Gossypium hirsutum HOM05D007507 ORTHO05D009420 6.7e-30 134.4 146 56.2
RcHm_v2.0_Chr5g0009091 Rosa chinensis HOM05D007507 ORTHO05D009420 6.7e-30 134.4 143 53.1
Eucgr.E03247 Eucalyptus grandis HOM05D007507 ORTHO05D009420 1.5e-29 133.3 145 55.2
Gorai.009G167100 Gossypium raimondii HOM05D007507 ORTHO05D009420 2.5e-29 132.5 145 55.2
Prupe.4G051900 Prunus persica HOM05D007507 ORTHO05D009420 2.5e-29 132.5 137 54.7
CSS0001598 Camellia sinensis var. sinensis HOM05D007507 ORTHO05D009420 9.7e-29 130.6 144 52.8
Ciclev10016932m.g Citrus clementina HOM05D007507 ORTHO05D009420 1.3e-28 130.2 151 53.6
Gohir.D09G073200 Gossypium hirsutum HOM05D007507 ORTHO05D009420 2.2e-28 129.4 150 54.7
Gorai.006G088200 Gossypium raimondii HOM05D007507 ORTHO05D009420 2.2e-28 129.4 150 54.7
Hma1.2p1_0558F.1_g178550 Hydrangea macrophylla HOM05D007507 ORTHO05D009420 2.2e-28 129.4 125 58.4
Gohir.A09G073500 Gossypium hirsutum HOM05D007507 ORTHO05D009420 2.8e-28 129.0 148 54.7
Glyma.15G077500 Glycine max HOM05D007507 ORTHO05D009420 6.3e-28 127.9 144 52.8
Lalb_Chr20g0121601 Lupinus albus HOM05D007507 ORTHO05D009420 6.3e-28 127.9 144 51.4
Medtr4g088390 Medicago truncatula HOM05D007507 ORTHO05D009420 1.1e-27 127.1 146 54.1
MBI07_g29118_MAGBIO Magnolia biondii HOM05D007507 ORTHO05D009420 1.8e-27 126.3 144 51.4
Phvul.006G182800 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 4.1e-27 125.2 142 52.8
Atru.chr10.1803 Acer truncatum HOM05D007507 ORTHO05D009420 5.3e-27 124.8 153 53.6
FvH4_3g08680 Fragaria vesca HOM05D007507 ORTHO05D009420 5.3e-27 124.8 143 49.7
Glyma.13G236200 Glycine max HOM05D007507 ORTHO05D009420 1.2e-26 123.6 145 52.4
FAN21G1585 Fragaria x ananassa HOM05D007507 ORTHO05D009420 1.5e-26 123.2 141 50.4
Cpa.g.sc27.9 Carica papaya HOM05D007507 ORTHO05D009420 2.0e-26 122.9 141 48.9
Nn1g04226 Nelumbo nucifera HOM05D007507 ORTHO05D009420 5.9e-26 121.3 132 53.8
TWI38G1903 Tripterygium wilfordii HOM05D007507 ORTHO05D009420 5.9e-26 121.3 146 51.4
Atru.chr10.1804 Acer truncatum HOM05D007507 ORTHO05D009420 1.0e-25 120.6 148 53.4
Cc02_g13780 Coffea canephora HOM05D007507 ORTHO05D009420 3.8e-25 118.6 144 52.8
FAN11G0818 Fragaria x ananassa HOM05D007507 ORTHO05D009420 3.8e-25 118.6 144 48.6
Lj4g0010126 Lotus japonicus HOM05D007507 ORTHO05D009420 5.0e-25 118.2 149 49.0
PGSC0003DMG400031763 Solanum tuberosum HOM05D007507 ORTHO05D009420 5.0e-25 118.2 141 52.5
TPR.G19926 Trifolium pratense HOM05D007507 ORTHO05D009420 8.5e-25 117.5 143 51.7
Medtr2g014380 Medicago truncatula HOM05D007507 ORTHO05D009420 1.9e-24 116.3 142 48.6
arahy.Tifrunner.gnm1.ann1.UCBT0G Arachis hypogaea HOM05D007507 ORTHO05D009420 3.2e-24 115.5 146 51.4
arahy.Tifrunner.gnm1.ann1.IERL18 Arachis hypogaea HOM05D007507 ORTHO05D009420 4.2e-24 115.2 146 52.1
Sopen02g022610 Solanum pennellii HOM05D007507 ORTHO05D009420 7.2e-24 114.4 145 47.6
Psat7g115600 Pisum sativum HOM05D007507 ORTHO05D009420 9.4e-24 114.0 149 50.3
PGR042G2392 Punica granatum HOM05D007507 ORTHO05D009420 9.4e-24 114.0 144 52.1
HanXRQChr04g0113131 Helianthus annuus HOM05D007507 ORTHO05D009420 1.2e-23 113.6 146 51.4
TPR.G39426 Trifolium pratense HOM05D007507 ORTHO05D009420 1.2e-23 113.6 142 48.6
Solyc02g077720.4 Solanum lycopersicum HOM05D007507 ORTHO05D009420 4.6e-23 111.7 145 46.9
Gorai.010G158100 Gossypium raimondii HOM05D007507 ORTHO05D009420 1.0e-22 110.5 147 46.9
CANSAT35G2017 Cannabis sativa HOM05D007507 ORTHO05D009420 1.8e-22 109.8 142 47.9
Lsat_1_v5_gn_7_22681 Lactuca sativa HOM05D007507 ORTHO05D009420 2.3e-22 109.4 143 50.3
Nitab4.5_0002813g0060 Nicotiana tabacum HOM05D007507 ORTHO05D009420 2.3e-22 109.4 129 55.0
Gohir.D06G135900 Gossypium hirsutum HOM05D007507 ORTHO05D009420 5.1e-22 108.2 150 47.3
Aqoxy4G00641 Aquilegia oxysepala HOM05D007507 ORTHO05D009420 6.7e-22 107.8 121 54.5
MSTRG.14710 Avicennia marina HOM05D007507 ORTHO05D009420 6.7e-22 107.8 141 48.9
arahy.Tifrunner.gnm1.ann1.XNU6AG Arachis hypogaea HOM05D007507 ORTHO05D009420 1.1e-21 107.1 147 47.6
VMungo0540G0304 Vigna mungo HOM05D007507 ORTHO05D009420 3.3e-21 105.5 140 48.6
arahy.Tifrunner.gnm1.ann1.26E61A Arachis hypogaea HOM05D007507 ORTHO05D009420 4.4e-21 105.1 147 47.6
Nitab4.5_0007893g0030 Nicotiana tabacum HOM05D007507 ORTHO05D009420 2.8e-20 102.4 129 51.2
DCAR_004049 Daucus carota HOM05D007507 ORTHO05D009420 1.8e-19 99.8 131 46.6
PSO675G6999 Papaver somniferum HOM05D007507 ORTHO05D009420 4.1e-19 98.6 142 45.1
Migut.H01473 Erythranthe guttata HOM05D007507 ORTHO05D009420 5.3e-19 98.2 152 47.4
Haze_06387 Corylus avellana HOM05D007507 ORTHO05D009420 3.4e-18 95.5 144 45.8
ClCG01G023220 Citrullus lanatus HOM05D007507 ORTHO05D009420 5.0e-17 91.7 147 43.5
CsaV3_6G050370 Cucumis sativus L. HOM05D007507 ORTHO05D009420 6.5e-17 91.3 149 42.3
Oeu027697.1 Olea europaea HOM05D007507 ORTHO05D009420 4.2e-16 88.6 126 46.8
Migut.M01111 Erythranthe guttata HOM05D007507 ORTHO05D009420 7.2e-16 87.8 142 42.3
Oeu015676.1 Olea europaea HOM05D007507 ORTHO05D009420 7.2e-16 87.8 125 45.6
ECA236G3296 Erigeron canadensis HOM05D007507 ORTHO05D009420 4.7e-15 85.1 86 62.8
PSO541G3558 Papaver somniferum HOM05D007507 ORTHO05D009420 2.3e-14 82.8 81 56.8
Oeu064800.1 Olea europaea HOM05D007507 ORTHO05D009420 3.0e-14 82.4 126 45.2
Sed0011593 Sechium edule HOM05D007507 ORTHO05D009420 6.7e-14 81.3 127 43.3
DCAR_008007 Daucus carota HOM05D007507 ORTHO05D009420 1.3e-12 77.0 138 39.9
SEGI_17757 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 1.3e-12 77.0 114 43.0
SalBow8G4682 Salvia bowleyana HOM05D007507 ORTHO05D009420 2.2e-12 76.3 129 44.2
MELO3C007264.2 Cucumis melo HOM05D007507 ORTHO05D009420 4.1e-11 72.0 132 40.2
Rhsim13G0180100 Rhododendron simsii HOM05D007507 ORTHO05D009420 1.6e-10 70.1 88 45.5
Peaxi162Scf00926g00516 Petunia axillaris HOM05D007507 ORTHO05D009420 1.0e-09 67.4 143 36.4
SEGI_35508 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 2.9e-09 65.9 68 55.9
SalBow8G0489 Salvia bowleyana HOM05D007507 ORTHO05D009420 6.5e-09 64.7 68 60.3
Psat1g203160 Pisum sativum HOM05D007507 ORTHO05D009420 2.5e-08 62.8 101 39.6
SalBow8G0028 Salvia bowleyana HOM05D002091 ORTHO05D002140 3.2e-08 62.4 124 42.7
SEGI_36970 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 9.4e-08 60.8 81 44.4
arahy.Tifrunner.gnm1.ann1.PE4GJ8 Arachis hypogaea HOM05D000372 ORTHO05D009420 1.6e-07 60.1 54 63.0
Lsat_1_v5_gn_9_23221 Lactuca sativa HOM05D003527 ORTHO05D004099 2.3e-06 56.2 74 43.2
ATR0680G191 Amborella trichopoda HOM05D003527 ORTHO05D004099 4.0e-06 55.5 77 46.8
COL.COLO4_14818 Corchorus olitorius HOM05D003527 ORTHO05D004099 8.8e-06 54.3 71 47.9


User provided reference genes

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