Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G043000 Populus trichocarpa HOM05D006195 ORTHO05D007710 3.0e-254 881.3 431 100.0
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 1.6e-204 716.1 365 93.7
QL04p018330 Quercus lobata HOM05D006195 ORTHO05D007710 7.7e-194 680.6 405 78.8
Atru.chr10.2006 Acer truncatum HOM05D006195 ORTHO05D007710 1.0e-193 680.2 409 78.5
CiPaw.09G158100 Carya illinoinensis HOM05D006195 ORTHO05D007710 9.4e-192 673.7 410 76.1
TWI38G0511 Tripterygium wilfordii HOM05D006195 ORTHO05D007710 4.7e-191 671.4 409 77.8
Ciclev10015313m.g Citrus clementina HOM05D006195 ORTHO05D007710 3.0e-190 668.7 405 78.3
Gohir.D05G168600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 1.5e-189 666.4 386 80.6
Gohir.A05G165600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 2.0e-189 666.0 386 80.6
Gorai.009G173800 Gossypium raimondii HOM05D006195 ORTHO05D007710 9.7e-189 663.7 386 80.3
Prupe.4G036600 Prunus persica HOM05D006195 ORTHO05D007710 8.2e-188 660.6 406 77.3
Thecc.06G199000 Theobroma cacao HOM05D006195 ORTHO05D007710 1.2e-186 656.8 379 80.2
MD10G1303200 Malus domestica HOM05D006195 ORTHO05D007710 4.5e-186 654.8 392 78.1
RcHm_v2.0_Chr5g0006371 Rosa chinensis HOM05D006195 ORTHO05D007710 1.0e-185 653.7 426 72.1
Eucgr.E03701 Eucalyptus grandis HOM05D006195 ORTHO05D007710 8.5e-185 650.6 408 73.0
COL.COLO4_31584 Corchorus olitorius HOM05D006195 ORTHO05D007710 9.4e-184 647.1 389 78.7
CsaV3_1G011800 Cucumis sativus L. HOM05D006195 ORTHO05D007710 2.7e-183 645.6 386 76.4
FvH4_3g04030 Fragaria vesca HOM05D006195 ORTHO05D007710 1.0e-182 643.7 389 76.9
Sed0022279 Sechium edule HOM05D006195 ORTHO05D007710 2.3e-182 642.5 386 76.4
Cpa.g.sc27.120 Carica papaya HOM05D006195 ORTHO05D007710 3.9e-182 641.7 383 77.8
ClCG03G005530 Citrullus lanatus HOM05D006195 ORTHO05D007710 6.7e-182 641.0 386 76.2
MD05G1325300 Malus domestica HOM05D006195 ORTHO05D007710 2.8e-180 635.6 422 72.5
Manes.17G039200 Manihot esculenta HOM05D006195 ORTHO05D007710 1.1e-179 633.6 366 81.1
GSVIVG01003194001 Vitis vinifera HOM05D006195 ORTHO05D007710 1.4e-179 633.3 380 76.8
FAN11G1039 Fragaria x ananassa HOM05D006195 ORTHO05D007710 1.8e-179 632.9 425 71.8
Actinidia24060 Actinidia chinensis HOM05D006195 ORTHO05D007710 5.9e-178 627.9 398 73.4
Cfa000355 Carpinus fangiana HOM05D006195 ORTHO05D007710 5.9e-178 627.9 410 74.1
CANSAT56G3748 Cannabis sativa HOM05D006195 ORTHO05D007710 7.7e-178 627.5 414 72.9
MBI14_g15641_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 1.7e-177 626.3 385 75.8
PGSC0003DMG400022408 Solanum tuberosum HOM05D006195 ORTHO05D007710 5.0e-177 624.8 409 72.4
Aqoxy1G02740 Aquilegia oxysepala HOM05D006195 ORTHO05D007710 8.5e-177 624.0 401 72.6
Duzib235G1322 Durio zibethinus HOM05D006195 ORTHO05D007710 8.5e-177 624.0 385 76.6
Lj2A280G38 Lonicera japonica HOM05D006195 ORTHO05D007710 8.5e-177 624.0 435 68.5
Rhsim02G0120000 Rhododendron simsii HOM05D006195 ORTHO05D007710 1.1e-176 623.6 407 72.5
Solyc02g079110.3 Solanum lycopersicum HOM05D006195 ORTHO05D007710 1.5e-176 623.2 409 72.1
Sopen02g023920 Solanum pennellii HOM05D006195 ORTHO05D007710 1.5e-176 623.2 409 72.1
TAR629G3096 Trochodendron aralioides HOM05D006195 ORTHO05D007710 1.9e-176 622.9 362 78.7
HanXRQChr14g0437281 Helianthus annuus HOM05D006195 ORTHO05D007710 2.5e-176 622.5 415 72.0
Lsat_1_v5_gn_7_19641 Lactuca sativa HOM05D006195 ORTHO05D007710 1.2e-175 620.2 400 74.2
PGR042G1193 Punica granatum HOM05D006195 ORTHO05D007710 1.6e-175 619.8 379 76.0
Sc17g0006620 Simmondsia chinensis HOM05D006195 ORTHO05D007710 2.1e-175 619.4 384 74.7
vmacro15867 Vaccinium macrocarpon HOM05D006195 ORTHO05D007710 5.2e-174 614.8 400 73.0
Cc02_g12450 Coffea canephora HOM05D006195 ORTHO05D007710 8.8e-174 614.0 400 71.5
Oeu038214.1 Olea europaea HOM05D006195 ORTHO05D007710 8.8e-174 614.0 383 72.8
Haze_06571 Corylus avellana HOM05D006195 ORTHO05D007710 2.6e-173 612.5 367 77.9
AL7G32530 Arabidopsis lyrata HOM05D006195 ORTHO05D007710 4.4e-173 611.7 398 71.4
PSO675G1294 Papaver somniferum HOM05D006195 ORTHO05D007710 5.7e-173 611.3 432 67.6
Migut.M01211 Erythranthe guttata HOM05D006195 ORTHO05D007710 1.7e-172 609.8 389 73.5
THA.LOC104806275 Tarenaya hassleriana HOM05D006195 ORTHO05D007710 1.7e-172 609.8 390 72.6
EL10Ac8g20527 Beta vulgaris HOM05D006195 ORTHO05D007710 2.2e-172 609.4 390 72.6
Carub.0007s1990 Capsella rubella HOM05D006195 ORTHO05D007710 2.2e-172 609.4 377 73.7
arahy.Tifrunner.gnm1.ann1.IWY5CJ Arachis hypogaea HOM05D006195 ORTHO05D007710 6.3e-172 607.8 395 72.4
Peaxi162Scf00355g00914 Petunia axillaris HOM05D006195 ORTHO05D007710 1.1e-171 607.1 419 69.0
AT4G21520 Arabidopsis thaliana HOM05D006195 ORTHO05D007710 1.4e-171 606.7 378 74.1
Migut.I00196 Erythranthe guttata HOM05D006195 ORTHO05D007710 1.4e-171 606.7 389 73.5
Nitab4.5_0009994g0040 Nicotiana tabacum HOM05D006195 ORTHO05D007710 1.8e-171 606.3 436 67.9
arahy.Tifrunner.gnm1.ann1.HDHM3Z Arachis hypogaea HOM05D006195 ORTHO05D007710 4.1e-171 605.1 385 73.2
BcaNung02791 Brassica carinata HOM05D006195 ORTHO05D007710 4.1e-171 605.1 377 73.5
Ca_18483_v3 Cicer arietinum L. HOM05D006195 ORTHO05D007710 1.2e-170 603.6 418 68.9
CARHR228180 Cardamine hirsuta HOM05D006195 ORTHO05D007710 2.7e-170 602.4 400 70.2
Aa31LG6G3540 Aethionema arabicum HOM05D006195 ORTHO05D007710 4.5e-170 601.7 403 71.0
Medtr4g091080 Medicago truncatula HOM05D006195 ORTHO05D007710 1.0e-169 600.5 382 73.0
Phvul.002G222200 Phaseolus vulgaris HOM05D006195 ORTHO05D007710 1.3e-169 600.1 401 70.3
Sp7g19630 Schrenkiella parvula HOM05D006195 ORTHO05D007710 2.9e-169 599.0 377 72.4
Thhalv10025271m.g Eutrema salsugineum HOM05D006195 ORTHO05D007710 5.0e-169 598.2 380 72.4
C01p15450 Brassica napus HOM05D006195 ORTHO05D007710 1.1e-168 597.0 374 73.5
BolC1t01499H Brassica oleracea HOM05D006195 ORTHO05D007710 1.1e-168 597.0 374 73.5
FAN25G3765 Fragaria x ananassa HOM05D006195 ORTHO05D007710 1.1e-168 597.0 411 71.0
VMungo0251G2515 Vigna mungo HOM05D006195 ORTHO05D007710 1.1e-168 597.0 408 69.9
A01p12830 Brassica napus HOM05D006195 ORTHO05D007710 7.2e-168 594.3 375 72.8
Lalb_Chr09g0327371 Lupinus albus HOM05D006195 ORTHO05D007710 9.4e-168 594.0 386 71.0
BraA01t01227Z Brassica rapa HOM05D006195 ORTHO05D007710 1.6e-167 593.2 376 72.6
MSTRG.8639 Avicennia marina HOM05D006195 ORTHO05D007710 4.7e-167 591.7 396 69.4
SalBow8G2471 Salvia bowleyana HOM05D006195 ORTHO05D007710 4.7e-167 591.7 371 73.6
ECA236G2696 Erigeron canadensis HOM05D006195 ORTHO05D007710 5.2e-166 588.2 388 72.4
SGA_v2.0_scaffold7G03951 Striga asiatica HOM05D006195 ORTHO05D007710 6.8e-166 587.8 373 72.7
Glyma.07G190200 Glycine max HOM05D006195 ORTHO05D007710 5.7e-165 584.7 410 67.8
MELO3C002557.2 Cucumis melo HOM05D006195 ORTHO05D007710 8.3e-164 580.9 389 71.7
TPR.G32422 Trifolium pratense HOM05D006195 ORTHO05D007710 8.3e-164 580.9 383 71.5
ATR0693G097 Amborella trichopoda HOM05D006195 ORTHO05D007710 5.4e-163 578.2 420 66.0
Lj4g0017156 Lotus japonicus HOM05D006195 ORTHO05D007710 8.6e-161 570.9 399 67.2
FAN21G3429 Fragaria x ananassa HOM05D006195 ORTHO05D007710 3.3e-160 568.9 411 68.6
Os03g0738000 Oryza sativa ssp. japonica HOM05D006195 ORTHO05D007710 4.4e-157 558.5 380 68.9
CSS0049192 Camellia sinensis var. sinensis HOM05D006195 ORTHO05D007710 1.7e-156 556.6 376 70.5
DCAR_008069 Daucus carota HOM05D006195 ORTHO05D007710 1.7e-153 546.6 400 65.5
Ah.14g088920 Amaranthus hybridus HOM05D006195 ORTHO05D007710 2.8e-151 539.3 397 65.5
Zm00001eb056530 Zea mays HOM05D006195 ORTHO05D007710 1.2e-146 523.9 380 65.5
AUR62014719 Chenopodium quinoa HOM05D006195 ORTHO05D007710 1.9e-144 516.5 357 70.6
Pp3c6_22670 Physcomitrium patens HOM05D006195 ORTHO05D007710 5.8e-141 505.0 386 61.9
Mapoly0082s0056 Marchantia polymorpha HOM05D006195 ORTHO05D007710 4.6e-138 495.4 409 57.9
CDE11G0466 Ceratophyllum demersum HOM05D006195 ORTHO05D007710 9.5e-136 487.6 336 66.7
AagrBONN_evm.TU.Sc2ySwM_344.4192 Anthoceros agrestis HOM05D006195 ORTHO05D007710 1.6e-135 486.9 374 61.8
Nitab4.5_0000190g0110 Nicotiana tabacum HOM05D006195 ORTHO05D007710 2.0e-133 479.9 334 68.0
MBI14_g13652_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 1.7e-132 476.9 394 60.7
AUR62016899 Chenopodium quinoa HOM05D006195 ORTHO05D007710 3.2e-131 472.6 387 60.5
Hund23609 Selenicereus undatus HOM05D006195 ORTHO05D007710 2.7e-130 469.5 311 73.0
Dinv40483 Davidia involucrata HOM05D006195 ORTHO05D007710 2.0e-125 453.4 265 79.2
unitig_37.g12337 Utricularia gibba HOM05D006195 ORTHO05D007710 1.7e-121 440.3 404 55.9
SMO137G0351 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 9.6e-120 434.5 364 56.6
Psat7g108560 Pisum sativum HOM05D006195 ORTHO05D007710 6.2e-119 431.8 291 70.1
CBR_g41455 Chara braunii HOM05D006195 ORTHO05D007710 1.6e-114 417.2 370 54.6
CBR_g20417 Chara braunii HOM05D006195 ORTHO05D007710 7.3e-112 408.3 337 57.6
Potri.004G034600 Populus trichocarpa HOM05D006195 ORTHO05D007710 2.2e-108 396.7 245 79.2
Eucgr.L01396 Eucalyptus grandis HOM05D006195 ORTHO05D007710 3.0e-97 359.8 232 72.8
Nn1g03899 Nelumbo nucifera HOM05D006195 ORTHO05D007710 9.0e-86 321.6 438 44.1
SMO116G0485 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 5.9e-85 318.9 278 54.3
Cre07.g326350 Chlamydomonas reinhardtii HOM05D006195 ORTHO05D007710 4.2e-83 312.8 363 44.9
TPR.G37128 Trifolium pratense HOM05D006195 ORTHO05D007710 1.2e-82 311.2 179 80.4
SalBow6G2099 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.3e-79 301.2 167 81.4
SalBow6G4337 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.3e-79 301.2 167 81.4
MCO07G204 Micromonas commoda HOM05D006195 ORTHO05D007710 3.1e-78 296.6 392 41.3
HPP92_018057 Vanilla planifolia HOM05D006195 ORTHO05D007710 1.1e-75 288.1 271 53.5
SalBow1G5137 Salvia bowleyana HOM05D006195 ORTHO05D007710 6.5e-68 262.3 146 81.5
Manes.10G084901 Manihot esculenta HOM05D006195 ORTHO05D007710 1.6e-53 214.5 128 81.2
Dinv18994 Davidia involucrata HOM05D006195 ORTHO05D007710 1.2e-50 204.9 196 56.6
GSVIVG01003189001 Vitis vinifera HOM05D006195 ORTHO05D007710 1.2e-50 204.9 141 66.7
SalBow4G2205 Salvia bowleyana HOM05D006195 ORTHO05D007710 2.0e-45 187.6 99 84.8
SHI02125 Sapria himalayana HOM05D006195 ORTHO05D007710 9.5e-43 178.7 101 76.2
PRCOL_00004057 Prasinoderma coloniale HOM05D006195 ORTHO05D007710 1.2e-42 178.3 293 34.8
SalBow1G7985 Salvia bowleyana HOM05D006195 ORTHO05D007710 2.6e-40 170.6 115 72.2
Nitab4.5_0003834g0010 Nicotiana tabacum HOM05D006195 ORTHO05D007710 5.4e-38 162.9 87 83.9
Thecc.06G199100 Theobroma cacao HOM05D006195 ORTHO05D007710 2.7e-37 160.6 99 73.7
CSS0050458 Camellia sinensis var. sinensis HOM05D000911 ORTHO05D007710 5.0e-36 156.4 89 77.5
SHI48938 Sapria himalayana HOM05D006195 ORTHO05D007710 1.3e-31 141.7 117 55.6
SEGI_17138 Sequoiadendron giganteum HOM05D006195 ORTHO05D007710 5.0e-28 129.8 80 68.8
SHI02124 Sapria himalayana HOM05D006195 ORTHO05D007710 2.6e-24 117.5 215 38.6
HPP92_018063 Vanilla planifolia HOM05D006195 ORTHO05D007710 8.1e-18 95.9 129 41.1
AL117U10020 Arabidopsis lyrata HOM05D064442 ORTHO05D011622 8.9e-17 92.4 72 59.7
CSS0013325 Camellia sinensis var. sinensis HOM05D006195 ORTHO05D007710 3.1e-09 67.4 66 50.0
Pp3c2_19830 Physcomitrium patens HOM05D002999 ORTHO05D003137 1.5e-08 65.1 254 26.4
AUR62043984 Chenopodium quinoa HOM05D002999 ORTHO05D003137 4.4e-08 63.5 209 26.8
Migut.M00121 Erythranthe guttata HOM05D001610 ORTHO05D001585 7.6e-08 62.8 215 26.0
Pp3c10_3720 Physcomitrium patens HOM05D002999 ORTHO05D003137 9.9e-08 62.4 254 26.8
Aqoxy2G03169 Aquilegia oxysepala HOM05D002999 ORTHO05D003137 1.7e-07 61.6 348 24.1
AagrBONN_evm.TU.Sc2ySwM_362.297 Anthoceros agrestis HOM05D002999 ORTHO05D003137 2.9e-07 60.8 238 25.6
Hund05388 Selenicereus undatus HOM05D002999 ORTHO05D003137 2.4e-06 57.8 145 29.7
THA.LOC104814195 Tarenaya hassleriana HOM05D000526 ORTHO05D000956 3.2e-06 57.4 266 23.7
Prupe.1G196200 Prunus persica HOM05D000526 ORTHO05D000956 5.4e-06 56.6 139 29.5
Pp3c1_22090 Physcomitrium patens HOM05D002999 ORTHO05D003137 7.1e-06 56.2 254 25.6


User provided reference genes

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