Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 1.3e-194 682.9 354 100.0
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 1.1e-182 643.3 354 94.9
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 1.1e-182 643.3 354 94.9
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 2.6e-139 499.2 349 73.9
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 9.2e-137 490.7 357 70.9
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 2.1e-136 489.6 354 72.6
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 5.4e-129 464.9 357 68.9
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 1.2e-128 463.8 355 70.1
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 1.0e-127 460.7 338 68.9
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 1.9e-126 456.4 358 67.3
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 4.3e-126 455.3 350 68.0
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 9.6e-126 454.1 355 68.7
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 2.1e-125 453.0 345 68.7
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 6.2e-125 451.4 317 71.9
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 8.1e-125 451.1 371 63.3
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 1.8e-124 449.9 316 71.8
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 4.0e-124 448.7 352 67.0
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 9.0e-124 447.6 345 66.4
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 1.5e-123 446.8 346 66.2
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 7.6e-123 444.5 347 66.0
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 7.6e-123 444.5 318 73.0
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 9.9e-123 444.1 312 71.2
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 1.7e-122 443.4 316 70.6
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 2.9e-122 442.6 319 71.5
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 4.9e-122 441.8 352 65.3
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 6.4e-122 441.4 346 65.0
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 6.4e-122 441.4 345 64.9
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 6.4e-122 441.4 312 70.5
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 1.4e-121 440.3 356 66.3
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 1.9e-121 439.9 318 69.2
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 3.2e-121 439.1 357 64.7
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 1.6e-120 436.8 346 64.5
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 1.6e-120 436.8 312 70.8
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 4.6e-120 435.3 312 68.9
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 4.6e-120 435.3 355 63.4
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 1.0e-119 434.1 355 62.8
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 1.0e-119 434.1 329 67.5
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 1.8e-119 433.3 316 69.3
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 5.1e-119 431.8 355 62.0
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 8.7e-119 431.0 356 65.4
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 1.1e-118 430.6 314 67.2
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 1.1e-118 430.6 314 67.2
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 1.1e-118 430.6 355 64.8
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 1.9e-118 429.9 311 69.8
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 4.3e-118 428.7 314 68.8
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 9.6e-118 427.6 313 66.8
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 9.6e-118 427.6 349 64.5
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 9.6e-118 427.6 316 68.4
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 2.1e-117 426.4 353 62.9
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 2.1e-117 426.4 315 65.4
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 4.8e-117 425.2 316 66.5
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 6.2e-117 424.9 349 66.8
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 1.1e-116 424.1 355 62.5
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 1.8e-116 423.3 314 65.6
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 4.0e-116 422.2 355 62.0
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 5.3e-116 421.8 316 67.4
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 6.9e-116 421.4 352 62.8
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 9.0e-116 421.0 355 62.5
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 9.0e-116 421.0 355 62.5
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 1.2e-115 420.6 355 61.7
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 1.2e-115 420.6 355 61.7
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 2.0e-115 419.9 318 65.4
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 4.5e-115 418.7 356 62.1
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 7.6e-115 417.9 314 67.2
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 1.3e-114 417.2 314 65.9
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 1.3e-114 417.2 314 65.9
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 1.3e-114 417.2 314 65.9
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 4.9e-114 415.2 418 56.9
Cc02_g11630 Coffea canephora HOM05D003755 ORTHO05D004385 6.4e-114 414.8 318 66.4
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 1.4e-113 413.7 357 61.9
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 1.9e-113 413.3 314 65.6
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 2.4e-113 412.9 355 62.3
Sc05g0008910 Simmondsia chinensis HOM05D003755 ORTHO05D004385 2.4e-113 412.9 345 60.9
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 7.1e-113 411.4 317 66.9
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 7.1e-113 411.4 317 67.8
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 2.1e-112 409.8 316 66.1
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 4.6e-112 408.7 317 65.3
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 3.0e-111 406.0 342 62.6
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 5.1e-111 405.2 356 61.0
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 2.5e-110 402.9 355 61.1
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 7.4e-110 401.4 316 64.9
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 7.4e-110 401.4 318 62.6
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 9.6e-110 401.0 355 60.6
ECA234G3589 Erigeron canadensis HOM05D003755 ORTHO05D004385 6.2e-109 398.3 345 62.3
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 6.2e-109 398.3 355 60.6
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 5.3e-108 395.2 345 61.4
Dinv20022 Davidia involucrata HOM05D003755 ORTHO05D004385 4.5e-107 392.1 279 71.0
Gorai.010G177400 Gossypium raimondii HOM05D003755 ORTHO05D004385 4.9e-106 388.7 338 61.8
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 1.4e-105 387.1 326 60.4
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 3.2e-105 386.0 314 61.8
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 4.2e-105 385.6 343 61.5
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 9.3e-105 384.4 316 61.1
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 9.3e-105 384.4 316 61.1
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 1.6e-104 383.6 317 60.3
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 2.7e-104 382.9 314 61.5
DCAR_028162 Daucus carota HOM05D003755 ORTHO05D004385 5.1e-103 378.6 319 62.7
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 8.7e-103 377.9 316 61.1
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.3e-101 374.0 346 59.0
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 8.2e-101 371.3 352 57.1
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 9.0e-100 367.9 346 57.5
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 9.0e-100 367.9 335 60.0
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 2.2e-98 363.2 342 56.1
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 3.2e-97 359.4 356 53.9
SEGI_11297 Sequoiadendron giganteum HOM05D003755 ORTHO05D004385 1.2e-96 357.5 314 58.9
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 3.6e-96 355.9 316 58.2
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 6.1e-96 355.1 314 57.6
SGA_v2.0_scaffold89G27449 Striga asiatica HOM05D003755 ORTHO05D004385 3.9e-95 352.4 314 58.3
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 8.8e-95 351.3 340 55.9
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 3.3e-94 349.4 267 67.0
TPR.G5472 Trifolium pratense HOM05D003755 ORTHO05D004385 5.7e-94 348.6 272 64.3
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 1.3e-93 347.4 348 54.6
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 3.7e-93 345.9 333 59.2
Gohir.D06G152000 Gossypium hirsutum HOM05D003755 ORTHO05D004385 6.3e-93 345.1 285 65.3
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 2.0e-91 340.1 314 57.3
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 5.5e-89 332.0 314 55.1
PGSC0003DMG400002072 Solanum tuberosum HOM05D003755 ORTHO05D004385 5.5e-89 332.0 315 52.4
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 7.9e-88 328.2 315 52.1
Sopen02g024900 Solanum pennellii HOM05D003755 ORTHO05D004385 1.0e-87 327.8 315 51.7
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 2.3e-87 326.6 315 51.4
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 2.3e-87 326.6 313 53.0
PGSC0003DMG400010547 Solanum tuberosum HOM05D003755 ORTHO05D004385 3.0e-87 326.2 304 57.2
Solyc02g080180.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 6.7e-87 325.1 315 51.1
SGA_v2.0_scaffold114G32031 Striga asiatica HOM05D003755 ORTHO05D004385 2.6e-86 323.2 263 62.0
Nitab4.5_0002196g0020 Nicotiana tabacum HOM05D003755 ORTHO05D004385 7.4e-86 321.6 339 52.5
Sopen10g003960 Solanum pennellii HOM05D003755 ORTHO05D004385 4.8e-85 318.9 306 55.6
SalBow8G5594 Salvia bowleyana HOM05D003755 ORTHO05D004385 6.3e-85 318.5 312 53.8
Haze_06749 Corylus avellana HOM05D003755 ORTHO05D004385 8.2e-85 318.2 233 70.4
Solyc10g008090.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 8.2e-85 318.2 344 51.7
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 1.1e-84 317.8 318 52.2
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 4.1e-84 315.8 314 54.8
CAN.G569.37 Capsicum annuum HOM05D003755 ORTHO05D004385 1.5e-83 313.9 358 47.8
Peaxi162Scf00241g00121 Petunia axillaris HOM05D003755 ORTHO05D004385 2.0e-83 313.5 344 50.9
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 2.9e-82 309.7 319 50.8
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 2.9e-82 309.7 319 50.8
Pp3c10_1910 Physcomitrium patens HOM05D003755 ORTHO05D004385 3.8e-82 309.3 315 50.2
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis HOM05D003755 ORTHO05D004385 5.0e-82 308.9 313 51.8
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 5.0e-82 308.9 317 51.1
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 1.9e-81 307.0 317 51.1
Lj1A1226T40 Lonicera japonica HOM05D003755 ORTHO05D004385 5.5e-81 305.4 291 56.4
SMO118G0372 Selaginella moellendorffii HOM05D003755 ORTHO05D004385 1.2e-80 304.3 316 51.3
Lsat_1_v5_gn_1_121441 Lactuca sativa HOM05D003755 ORTHO05D004385 6.7e-79 298.5 354 46.3
HanXRQChr01g0003661 Helianthus annuus HOM05D003755 ORTHO05D004385 2.0e-78 297.0 313 47.9
Gohir.A09G069600 Gossypium hirsutum HOM05D003755 ORTHO05D004385 8.2e-77 291.6 268 57.1
AUR62021999 Chenopodium quinoa HOM05D003755 ORTHO05D004385 1.2e-75 287.7 189 70.4
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis HOM05D003755 ORTHO05D004385 2.6e-75 286.6 312 48.7
MBI14_g15203_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.7e-74 283.9 222 62.6
Nitab4.5_0010745g0030 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.1e-72 276.9 191 68.1
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 2.3e-71 273.5 268 55.6
Nn1g03617 Nelumbo nucifera HOM05D003755 ORTHO05D004385 4.0e-71 272.7 179 70.9
CAN.G404.10 Capsicum annuum HOM05D003755 ORTHO05D004385 6.7e-71 271.9 189 69.3
MBI06_g27714_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.1e-65 254.6 189 64.6
Nitab4.5_0002347g0110 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.1e-65 254.6 189 61.4
CBR_g36660 Chara braunii HOM05D003755 ORTHO05D004385 9.8e-62 241.5 313 45.0
MBI19_g26612_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 3.7e-61 239.6 182 64.8
Sed0022949 Sechium edule HOM05D003755 ORTHO05D004385 1.9e-57 227.3 195 61.5
CAN.G782.22 Capsicum annuum HOM05D003755 ORTHO05D004385 1.0e-55 221.5 233 50.6
Peaxi162Scf00427g00012 Petunia axillaris HOM05D003755 ORTHO05D004385 1.8e-55 220.7 190 54.7
CBR_g46234 Chara braunii HOM05D003755 ORTHO05D004385 9.2e-52 208.4 310 40.6
Nitab4.5_0002645g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 7.8e-51 205.3 184 54.9
Actinidia26947 Actinidia chinensis HOM05D003755 ORTHO05D004385 3.8e-50 203.0 226 50.9
TPR.G16992 Trifolium pratense HOM05D003755 ORTHO05D004385 4.0e-47 193.0 149 65.1
Lsat_1_v5_gn_3_29240 Lactuca sativa HOM05D003755 ORTHO05D004385 5.4e-44 182.6 335 34.9
BraA01t03199Z Brassica rapa HOM05D003755 ORTHO05D004385 5.2e-39 166.0 174 53.4
CAN.G782.11 Capsicum annuum HOM05D003755 ORTHO05D004385 2.4e-36 157.1 162 54.3
Lsat_1_v5_gn_7_27941 Lactuca sativa HOM05D003755 ORTHO05D004385 1.4e-31 141.4 172 47.1
Lsat_1_v5_gn_7_47961 Lactuca sativa HOM05D003755 ORTHO05D004385 3.1e-31 140.2 92 71.7
BcaC04g22351 Brassica carinata HOM05D003755 ORTHO05D004385 2.6e-30 137.1 104 66.3
CAN.G782.12 Capsicum annuum HOM05D003755 ORTHO05D004385 3.5e-27 126.7 95 63.2
Cre16.g675602 Chlamydomonas reinhardtii HOM05D003755 ORTHO05D004385 7.3e-25 119.0 314 30.9
MD02G1269300 Malus domestica HOM05D003755 ORTHO05D004385 6.2e-24 115.9 77 71.4
Lsat_1_v5_gn_4_80500 Lactuca sativa HOM05D003755 ORTHO05D004385 1.5e-22 111.3 89 62.9
QL08p007617 Quercus lobata HOM05D003755 ORTHO05D004385 1.0e-18 98.6 81 56.8
QL10p045362 Quercus lobata HOM05D003755 ORTHO05D004385 2.3e-18 97.4 80 58.8
MD02G1269200 Malus domestica HOM05D003755 ORTHO05D004385 6.6e-18 95.9 76 60.5
C09p20250 Brassica napus HOM05D003755 ORTHO05D004385 3.6e-16 90.1 75 60.0
SMO351G0034 Selaginella moellendorffii HOM05D003755 ORTHO05D376906 1.1e-15 88.6 302 27.2
Lsat_1_v5_gn_7_47981 Lactuca sativa HOM05D003755 ORTHO05D004385 6.4e-13 79.3 100 45.0
EL10As1g23076 Beta vulgaris HOM05D003755 ORTHO05D004385 1.4e-12 78.2 48 77.1
BcaB07g31286 Brassica carinata HOM05D003755 ORTHO05D004385 1.9e-12 77.8 74 56.8
QL03p066087 Quercus lobata HOM05D003755 ORTHO05D004385 1.9e-12 77.8 54 68.5
BolC9t54930H Brassica oleracea HOM05D003755 ORTHO05D004385 4.2e-12 76.6 57 59.6
AagrBONN_evm.TU.Sc2ySwM_228.3672 Anthoceros agrestis HOM05D003755 ORTHO05D004385 3.6e-08 63.5 76 47.4


User provided reference genes

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