Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G270200 Populus trichocarpa HOM05D008262 ORTHO05D010389 3.9e-71 271.6 156 100.0
Potri.011G011400 Populus trichocarpa HOM05D008262 ORTHO05D010389 3.9e-71 271.6 156 100.0
Potri.004G004100 Populus trichocarpa HOM05D008262 ORTHO05D010389 2.6e-59 232.3 156 82.1
Sabra11G0011600 Salix brachista HOM05D001288 ORTHO05D010389 2.4e-57 225.7 149 88.6
Sabra11G0010100 Salix brachista HOM05D008262 ORTHO05D010389 6.2e-53 211.1 152 83.6
Cfa000160 Carpinus fangiana HOM05D008262 ORTHO05D010389 2.0e-30 136.3 169 54.4
GSVIVG01004813001 Vitis vinifera HOM05D008262 ORTHO05D010389 1.1e-28 130.6 162 56.8
Dinv20108 Davidia involucrata HOM05D008262 ORTHO05D010389 1.8e-28 129.8 163 54.0
Hma1.2p1_1358F.1_g278000 Hydrangea macrophylla HOM05D008262 ORTHO05D010389 6.9e-28 127.9 165 50.3
Duzib160G0751 Durio zibethinus HOM05D008262 ORTHO05D010389 3.4e-27 125.6 163 52.8
Thecc.06G228300 Theobroma cacao HOM05D008262 ORTHO05D010389 4.5e-27 125.2 168 56.0
QL05p071877 Quercus lobata HOM05D008262 ORTHO05D010389 5.9e-27 124.8 163 54.0
Haze_06858 Corylus avellana HOM05D008262 ORTHO05D010389 8.5e-26 120.9 162 52.5
GSVIVG01004816001 Vitis vinifera HOM05D008262 ORTHO05D010389 1.9e-25 119.8 153 56.2
Gohir.D06G157400 Gossypium hirsutum HOM05D008262 ORTHO05D010389 1.2e-24 117.1 165 49.7
Ciclev10017034m.g Citrus clementina HOM05D008262 ORTHO05D010389 4.7e-24 115.2 160 50.0
Actinidia39261 Actinidia chinensis HOM05D008262 ORTHO05D010389 6.1e-24 114.8 156 50.6
Gorai.010G183900 Gossypium raimondii HOM05D008262 ORTHO05D010389 2.3e-23 112.8 165 48.5
Gohir.A06G151200 Gossypium hirsutum HOM05D008262 ORTHO05D010389 2.6e-22 109.4 165 47.3
MD10G1326900 Malus domestica HOM05D008262 ORTHO05D010389 4.4e-22 108.6 169 49.7
TAR626G1083 Trochodendron aralioides HOM05D008262 ORTHO05D010389 9.7e-22 107.5 145 52.4
vmacro15804 Vaccinium macrocarpon HOM05D008262 ORTHO05D010389 1.7e-21 106.7 160 49.4
CANSAT56G3510 Cannabis sativa HOM05D008262 ORTHO05D010389 4.1e-20 102.1 165 43.0
CANSAT56G4204 Cannabis sativa HOM05D008262 ORTHO05D010389 4.1e-20 102.1 165 43.0
Cpa.g.c34179.2 Carica papaya HOM05D008262 ORTHO05D010389 1.0e-18 97.4 128 51.6
Prupe.4G015100 Prunus persica HOM05D008262 ORTHO05D010389 1.0e-18 97.4 174 43.7
Rhsim02G0104900 Rhododendron simsii HOM05D008262 ORTHO05D010389 6.5e-18 94.7 162 42.6
CiPaw.09G098200 Carya illinoinensis HOM05D008262 ORTHO05D010389 2.5e-17 92.8 172 48.3
PSO210G6064 Papaver somniferum HOM05D008262 ORTHO05D010389 9.4e-17 90.9 158 41.1
Sed0027045 Sechium edule HOM05D008262 ORTHO05D010389 8.0e-16 87.8 144 43.8
PSO832G2202 Papaver somniferum HOM05D008262 ORTHO05D010389 1.0e-15 87.4 153 40.5
CsaV3_6G048720 Cucumis sativus L. HOM05D008262 ORTHO05D010389 1.4e-15 87.0 155 43.2
ClCG01G021670 Citrullus lanatus HOM05D008262 ORTHO05D010389 3.0e-15 85.9 153 43.1
RcHm_v2.0_Chr5g0002091 Rosa chinensis HOM05D008262 ORTHO05D010389 3.0e-15 85.9 169 41.4
Nn1g07277 Nelumbo nucifera HOM05D008262 ORTHO05D010389 3.9e-15 85.5 160 43.8
FAN08G2823 Fragaria x ananassa HOM05D008262 ORTHO05D010389 4.4e-14 82.0 135 43.7
Lsat_1_v5_gn_7_14921 Lactuca sativa HOM05D008262 ORTHO05D010389 2.2e-13 79.7 153 39.9
MELO3C007418.2 Cucumis melo HOM05D008262 ORTHO05D010389 3.7e-13 79.0 156 41.7
FAN04G2856 Fragaria x ananassa HOM05D008262 ORTHO05D010389 8.2e-13 77.8 135 43.0
AL7G31530 Arabidopsis lyrata HOM05D008262 ORTHO05D010389 2.6e-11 72.8 145 40.0
FAN13G3130 Fragaria x ananassa HOM05D008262 ORTHO05D010389 4.5e-11 72.0 88 53.4
A01p13510 Brassica napus HOM05D008262 ORTHO05D010389 5.9e-11 71.6 128 43.0
BraA01t01292Z Brassica rapa HOM05D008262 ORTHO05D010389 5.9e-11 71.6 128 43.0
C01p16340 Brassica napus HOM05D008262 ORTHO05D010389 1.3e-10 70.5 128 42.2
BolC1t01585H Brassica oleracea HOM05D008262 ORTHO05D010389 1.3e-10 70.5 128 42.2
FvH4_5g10500 Fragaria vesca HOM05D008262 ORTHO05D010389 1.3e-10 70.5 140 39.3
FAN18G3649 Fragaria x ananassa HOM05D008262 ORTHO05D010389 2.2e-10 69.7 140 39.3
AT4G22160 Arabidopsis thaliana HOM05D008262 ORTHO05D010389 3.8e-10 68.9 130 44.6
BcaNung03758 Brassica carinata HOM05D008262 ORTHO05D010389 6.5e-10 68.2 162 35.8
Sp7g20320 Schrenkiella parvula HOM05D008262 ORTHO05D010389 8.5e-10 67.8 103 46.6
CARHR228990 Cardamine hirsuta HOM05D008262 ORTHO05D010389 3.2e-09 65.9 132 40.2
Carub.0007s1916 Capsella rubella HOM05D008262 ORTHO05D010389 1.2e-08 63.9 134 42.5
HanXRQChr15g0470801 Helianthus annuus HOM05D008262 ORTHO05D010389 8.0e-08 61.2 112 42.0
MBI05_g29353_MAGBIO Magnolia biondii HOM05D008262 ORTHO05D010389 8.0e-08 61.2 82 51.2
Eucgr.E03985 Eucalyptus grandis HOM05D008262 ORTHO05D010389 1.0e-07 60.8 165 34.5
BcaC09g51156 Brassica carinata HOM05D008262 ORTHO05D010389 3.0e-07 59.3 82 48.8
PGR042G3688 Punica granatum HOM05D008262 ORTHO05D010389 2.0e-06 56.6 164 37.2


User provided reference genes

Program Settings