Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G010400 Populus trichocarpa HOM05D006535 ORTHO05D008548 2.7e-305 1051.2 536 100.0
Potri.004G005500 Populus trichocarpa HOM05D006535 ORTHO05D008548 2.0e-252 875.5 534 84.5
Thecc.06G227200 Theobroma cacao HOM05D006535 ORTHO05D008548 3.2e-213 745.3 539 72.9
Duzib235G1465 Durio zibethinus HOM05D006535 ORTHO05D008548 5.4e-213 744.6 540 72.0
Haze_06851 Corylus avellana HOM05D006535 ORTHO05D008548 2.0e-212 742.7 532 72.7
Cfa000168 Carpinus fangiana HOM05D006535 ORTHO05D008548 5.9e-212 741.1 524 73.9
CiPaw.09G097300 Carya illinoinensis HOM05D006535 ORTHO05D008548 8.6e-211 737.3 526 72.8
COL.COLO4_37574 Corchorus olitorius HOM05D006535 ORTHO05D008548 1.9e-210 736.1 524 72.5
QL05p072061 Quercus lobata HOM05D006535 ORTHO05D008548 4.4e-207 724.9 542 70.1
CANSAT56G3727 Cannabis sativa HOM05D006535 ORTHO05D008548 1.7e-206 723.0 535 69.3
GSVIVG01012659001 Vitis vinifera HOM05D006535 ORTHO05D008548 2.9e-206 722.2 550 69.8
Dinv13934 Davidia involucrata HOM05D006535 ORTHO05D008548 3.2e-205 718.8 536 71.1
RcHm_v2.0_Chr5g0002321 Rosa chinensis HOM05D006535 ORTHO05D008548 5.4e-205 718.0 532 70.1
TWI38G0380 Tripterygium wilfordii HOM05D006535 ORTHO05D008548 2.7e-204 715.7 534 70.6
Glyma.15G111500 Glycine max HOM05D006535 ORTHO05D008548 1.5e-202 709.9 522 70.9
Hma1.2p1_1358F.1_g277940 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 1.2e-201 706.8 537 70.6
MELO3C021729.2 Cucumis melo HOM05D006535 ORTHO05D008548 4.7e-201 704.9 537 68.5
MD05G1351700 Malus domestica HOM05D006535 ORTHO05D008548 4.7e-201 704.9 529 70.1
CsaV3_1G046130 Cucumis sativus L. HOM05D006535 ORTHO05D008548 6.2e-201 704.5 537 68.2
FvH4_3g01470 Fragaria vesca HOM05D006535 ORTHO05D008548 8.1e-201 704.1 521 69.9
Eucgr.E03992 Eucalyptus grandis HOM05D006535 ORTHO05D008548 2.3e-200 702.6 528 71.2
Glyma.09G007100 Glycine max HOM05D006535 ORTHO05D008548 5.2e-200 701.4 522 70.9
PGR042G2820 Punica granatum HOM05D006535 ORTHO05D008548 5.2e-200 701.4 530 68.9
TAR626G0131 Trochodendron aralioides HOM05D006535 ORTHO05D008548 5.2e-200 701.4 544 67.5
Psat1g177760 Pisum sativum HOM05D006535 ORTHO05D008548 2.0e-199 699.5 531 69.3
Actinidia11871 Actinidia chinensis HOM05D006535 ORTHO05D008548 2.6e-199 699.1 535 68.8
Sed0002831 Sechium edule HOM05D006535 ORTHO05D008548 5.8e-199 698.0 552 67.4
Lj6g0003188 Lotus japonicus HOM05D006535 ORTHO05D008548 2.9e-198 695.7 523 69.0
Gohir.D10G010800 Gossypium hirsutum HOM05D006535 ORTHO05D008548 8.3e-198 694.1 536 68.5
Medtr2g024310 Medicago truncatula HOM05D006535 ORTHO05D008548 2.4e-197 692.6 504 71.2
Gorai.011G011900 Gossypium raimondii HOM05D006535 ORTHO05D008548 3.2e-197 692.2 538 68.4
Rhsim02G0105100 Rhododendron simsii HOM05D006535 ORTHO05D008548 7.1e-197 691.0 526 70.3
Aqoxy1G03005 Aquilegia oxysepala HOM05D006535 ORTHO05D008548 1.2e-196 690.3 527 69.1
ClCG01G009650 Citrullus lanatus HOM05D006535 ORTHO05D008548 1.2e-196 690.3 552 66.7
Nn1g07251 Nelumbo nucifera HOM05D006535 ORTHO05D008548 1.7e-195 686.4 519 67.2
Ca_00689_v3 Cicer arietinum L. HOM05D006535 ORTHO05D008548 5.1e-195 684.9 502 70.9
Sc05g0009420 Simmondsia chinensis HOM05D006535 ORTHO05D008548 6.6e-195 684.5 532 66.7
Lalb_Chr18g0056581 Lupinus albus HOM05D006535 ORTHO05D008548 8.6e-195 684.1 531 68.5
Gohir.A10G011200 Gossypium hirsutum HOM05D006535 ORTHO05D008548 1.9e-194 682.9 538 67.8
Phvul.006G146200 Phaseolus vulgaris HOM05D006535 ORTHO05D008548 3.3e-194 682.2 525 69.0
VMungo0540G1326 Vigna mungo HOM05D006535 ORTHO05D008548 2.1e-193 679.5 504 70.4
THA.LOC104812977 Tarenaya hassleriana HOM05D006535 ORTHO05D008548 1.8e-192 676.4 539 66.4
AT4G04320 Arabidopsis thaliana HOM05D006535 ORTHO05D008548 7.6e-191 671.0 520 68.1
Cc09_g01280 Coffea canephora HOM05D006535 ORTHO05D008548 1.7e-190 669.8 523 67.5
AL6G47860 Arabidopsis lyrata HOM05D006535 ORTHO05D008548 1.4e-189 666.8 525 66.5
PSO541G2423 Papaver somniferum HOM05D006535 ORTHO05D008548 2.1e-188 662.9 537 65.2
Migut.H01587 Erythranthe guttata HOM05D006535 ORTHO05D008548 2.7e-188 662.5 523 66.3
AUR62012752 Chenopodium quinoa HOM05D006535 ORTHO05D008548 4.6e-188 661.8 528 65.5
vmacro15802 Vaccinium macrocarpon HOM05D006535 ORTHO05D008548 6.0e-188 661.4 500 68.8
Ciclev10015047m.g Citrus clementina HOM05D006535 ORTHO05D008548 1.7e-187 659.8 498 70.3
Carub.0006s3215 Capsella rubella HOM05D006535 ORTHO05D008548 1.1e-186 657.1 525 66.1
MSTRG.14630 Avicennia marina HOM05D006535 ORTHO05D008548 1.5e-186 656.8 524 66.4
Hund23439 Selenicereus undatus HOM05D006535 ORTHO05D008548 3.3e-186 655.6 536 64.6
CARHR253140 Cardamine hirsuta HOM05D006535 ORTHO05D008548 5.6e-186 654.8 522 66.1
Sp6g04530 Schrenkiella parvula HOM05D006535 ORTHO05D008548 7.3e-186 654.4 525 65.5
A03p29930 Brassica napus HOM05D006535 ORTHO05D008548 2.1e-185 652.9 526 65.2
ECA248G3623 Erigeron canadensis HOM05D006535 ORTHO05D008548 2.8e-185 652.5 516 66.3
BcaC01g04564 Brassica carinata HOM05D006535 ORTHO05D008548 4.0e-184 648.7 526 65.4
HanXRQChr01g0006511 Helianthus annuus HOM05D006535 ORTHO05D008548 1.2e-183 647.1 532 64.1
arahy.Tifrunner.gnm1.ann1.H9DKU3 Arachis hypogaea HOM05D006535 ORTHO05D008548 2.0e-183 646.4 569 61.7
AUR62021906 Chenopodium quinoa HOM05D006535 ORTHO05D008548 3.8e-182 642.1 462 70.3
FAN21G0938 Fragaria x ananassa HOM05D006535 ORTHO05D008548 1.4e-181 640.2 537 63.7
Thhalv10028619m.g Eutrema salsugineum HOM05D006535 ORTHO05D008548 2.4e-181 639.4 481 68.6
Lsat_1_v5_gn_1_129581 Lactuca sativa HOM05D006535 ORTHO05D008548 7.1e-181 637.9 492 66.5
DCAR_024986 Daucus carota HOM05D006535 ORTHO05D008548 1.3e-179 633.6 471 69.4
Ah.09g234560 Amaranthus hybridus HOM05D006535 ORTHO05D008548 1.7e-179 633.3 530 63.8
Prupe.I000100 Prunus persica HOM05D006535 ORTHO05D008548 2.1e-177 626.3 436 74.1
BcaB01g02601 Brassica carinata HOM05D006535 ORTHO05D008548 3.6e-177 625.5 520 64.2
Oeu049693.4 Olea europaea HOM05D006535 ORTHO05D008548 4.8e-177 625.2 599 60.1
arahy.Tifrunner.gnm1.ann1.P3I999 Arachis hypogaea HOM05D006535 ORTHO05D008548 6.2e-177 624.8 534 62.9
Aa31LG9G9880 Aethionema arabicum HOM05D006535 ORTHO05D008548 8.1e-177 624.4 526 64.4
CAN.G23.21 Capsicum annuum HOM05D006535 ORTHO05D008548 3.4e-175 619.0 523 62.9
BraA03t12182Z Brassica rapa HOM05D006535 ORTHO05D008548 5.8e-175 618.2 522 62.8
C03p36220 Brassica napus HOM05D006535 ORTHO05D008548 7.6e-175 617.8 522 63.4
BolC3t15931H Brassica oleracea HOM05D006535 ORTHO05D008548 3.8e-174 615.5 522 63.2
ATR0686G032 Amborella trichopoda HOM05D006535 ORTHO05D008548 6.4e-174 614.8 468 66.7
unitig_61.g26097 Utricularia gibba HOM05D006535 ORTHO05D008548 7.9e-172 607.8 466 65.5
Manes.17G027900 Manihot esculenta HOM05D006535 ORTHO05D008548 2.4e-165 586.3 536 60.6
EL10Ac8g20123 Beta vulgaris HOM05D006535 ORTHO05D008548 4.6e-164 582.0 417 69.3
HPP92_010356 Vanilla planifolia HOM05D006535 ORTHO05D008548 1.6e-161 573.5 502 61.8
Nitab4.5_0002668g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 4.8e-161 572.0 489 63.0
SEGI_21824 Sequoiadendron giganteum HOM05D006535 ORTHO05D008548 2.5e-157 559.7 521 57.4
Zm00001eb099100 Zea mays HOM05D006535 ORTHO05D008548 5.7e-154 548.5 476 60.5
CDE06G1909 Ceratophyllum demersum HOM05D006535 ORTHO05D008548 1.3e-150 537.3 540 54.6
Os09g0394100 Oryza sativa ssp. japonica HOM05D006535 ORTHO05D008548 2.2e-150 536.6 455 60.4
FAN25G2414 Fragaria x ananassa HOM05D006535 ORTHO05D008548 1.6e-148 530.4 540 56.9
Hma1.2p1_1358F.1_g277950 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 1.8e-136 490.3 354 72.6
Sabra04G0002800 Salix brachista HOM05D006535 ORTHO05D008548 1.6e-132 477.2 321 78.8
AagrBONN_evm.TU.Sc2ySwM_117.3852 Anthoceros agrestis HOM05D006535 ORTHO05D008548 4.5e-127 459.1 479 49.9
Mapoly0112s0027 Marchantia polymorpha HOM05D006535 ORTHO05D008548 8.5e-126 454.9 500 47.8
Lj1C1235T17 Lonicera japonica HOM05D006535 ORTHO05D008548 1.6e-124 450.7 521 52.2
SMO367G0626 Selaginella moellendorffii HOM05D000208 ORTHO05D008548 2.3e-123 446.8 500 49.4
TPR.G33068 Trifolium pratense HOM05D006535 ORTHO05D008548 8.8e-123 444.9 360 67.2
Pp3c1_9420 Physcomitrium patens HOM05D006535 ORTHO05D008548 2.2e-118 430.3 513 46.0
Nitab4.5_0000005g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 5.9e-111 405.6 377 60.5
Peaxi162Scf00294g01013 Petunia axillaris HOM05D006535 ORTHO05D008548 2.5e-101 373.6 481 45.7
PGSC0003DMG401021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 3.4e-98 363.2 313 63.9
SGA_v2.0_scaffold89G27482 Striga asiatica HOM05D006535 ORTHO05D008548 4.9e-97 359.4 282 67.0
Prupe.4G015900 Prunus persica HOM05D006535 ORTHO05D008548 9.2e-88 328.6 225 72.4
PGSC0003DMG402021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 2.5e-69 267.3 211 62.1
Atru.chr10.2274 Acer truncatum HOM05D006535 ORTHO05D008548 1.6e-52 211.5 135 76.3
CBR_g2794 Chara braunii HOM05D006535 ORTHO05D008548 2.4e-48 197.6 272 43.0
TPR.G13151 Trifolium pratense HOM05D006535 ORTHO05D008548 8.2e-44 182.6 120 73.3
Cre02.g145200 Chlamydomonas reinhardtii HOM05D006535 ORTHO05D008548 6.5e-41 172.9 432 31.0
Eucgr.E03995 Eucalyptus grandis HOM05D006535 ORTHO05D000824 3.9e-38 163.7 106 75.5
Cpa.g.c42047 Carica papaya HOM05D006535 ORTHO05D008548 5.3e-35 153.3 91 81.3
RcHm_v2.0_Chr3g0487171 Rosa chinensis HOM05D006535 ORTHO05D008548 1.0e-33 149.1 133 60.9
Solyc02g036290.4 Solanum lycopersicum HOM05D006535 ORTHO05D008548 2.8e-28 131.0 91 68.1
CBR_g2795 Chara braunii HOM05D006535 ORTHO05D008548 6.3e-28 129.8 180 41.7
BolC9t56193H Brassica oleracea HOM05D006535 ORTHO05D008548 9.1e-27 125.9 304 34.2
C09p33590 Brassica napus HOM05D006535 ORTHO05D008548 5.0e-25 120.2 304 33.2
Solyc02g036300.3 Solanum lycopersicum HOM05D006535 ORTHO05D008548 1.4e-22 112.1 109 50.5
Nitab4.5_0017473g0010 Nicotiana tabacum HOM05D006535 ORTHO05D008548 2.2e-20 104.8 142 44.4
Carub.0007s3335 Capsella rubella HOM05D006535 ORTHO05D008548 1.3e-17 95.5 126 46.0
RcHm_v2.0_Chr5g0002771 Rosa chinensis HOM05D006535 ORTHO05D008548 2.1e-15 88.2 61 73.8
Solyc02g036310.4 Solanum lycopersicum HOM05D006535 ORTHO05D008548 7.4e-13 79.7 86 50.0
Sopen02g011690 Solanum pennellii HOM05D006535 ORTHO05D008548 2.2e-12 78.2 134 41.0
A09p26400 Brassica napus HOM05D006535 ORTHO05D033081 1.2e-10 72.4 296 25.0
C03p62470 Brassica napus HOM05D006535 ORTHO05D042350 3.8e-09 67.4 162 33.3
BolC3t18504H Brassica oleracea HOM05D006535 ORTHO05D042350 3.8e-09 67.4 162 33.3
BcaC02g09432 Brassica carinata HOM05D006535 ORTHO05D008548 4.7e-07 60.5 34 79.4
BraA09t38215Z Brassica rapa HOM05D006535 ORTHO05D033081 8.8e-06 56.2 30 86.7


User provided reference genes

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