Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G010300 Populus trichocarpa HOM05D007052 ORTHO05D008871 1.2e-94 349.7 173 100.0
Sabra11G0007900 Salix brachista HOM05D007052 ORTHO05D008871 3.6e-86 321.6 173 91.9
Cfa000169 Carpinus fangiana HOM05D007052 ORTHO05D008871 1.9e-71 272.7 174 79.9
TWI38G1879 Tripterygium wilfordii HOM05D007052 ORTHO05D008871 3.3e-71 271.9 173 76.3
Haze_06850 Corylus avellana HOM05D007052 ORTHO05D008871 7.3e-71 270.8 174 78.7
GSVIVG01012660001 Vitis vinifera HOM05D007052 ORTHO05D008871 5.8e-68 261.2 167 77.2
TAR627G0466 Trochodendron aralioides HOM05D007052 ORTHO05D008871 7.6e-68 260.8 165 78.2
VMungo0540G2459 Vigna mungo HOM05D007052 ORTHO05D008871 2.2e-67 259.2 174 75.3
Lj1A1235T90 Lonicera japonica HOM05D007052 ORTHO05D008871 8.4e-67 257.3 175 76.0
Manes.17G028000 Manihot esculenta HOM05D007052 ORTHO05D008871 5.4e-66 254.6 174 71.8
Phvul.006G146300 Phaseolus vulgaris HOM05D007052 ORTHO05D008871 3.5e-65 251.9 174 73.0
Aqoxy1G03011 Aquilegia oxysepala HOM05D007052 ORTHO05D008871 6.0e-65 251.1 172 71.5
Glyma.15G111400 Glycine max HOM05D007052 ORTHO05D008871 3.9e-64 248.4 174 70.7
Thecc.06G227100 Theobroma cacao HOM05D007052 ORTHO05D008871 3.9e-64 248.4 172 70.9
arahy.Tifrunner.gnm1.ann1.LNF63F Arachis hypogaea HOM05D007052 ORTHO05D008871 6.7e-64 247.7 164 74.4
arahy.Tifrunner.gnm1.ann1.MS5PCD Arachis hypogaea HOM05D007052 ORTHO05D008871 6.7e-64 247.7 164 74.4
Duzib235G0934 Durio zibethinus HOM05D007052 ORTHO05D008871 6.7e-64 247.7 172 70.9
Ciclev10016958m.g Citrus clementina HOM05D007052 ORTHO05D008871 1.5e-63 246.5 174 73.0
Glyma.09G007000 Glycine max HOM05D007052 ORTHO05D008871 1.5e-63 246.5 174 70.7
QL05p072067 Quercus lobata HOM05D007052 ORTHO05D008871 9.6e-63 243.8 232 57.8
vmacro15801 Vaccinium macrocarpon HOM05D007052 ORTHO05D008871 9.6e-63 243.8 177 70.1
Ca_00688_v3 Cicer arietinum L. HOM05D007052 ORTHO05D008871 1.3e-62 243.4 176 70.5
Rhsim02G0105300 Rhododendron simsii HOM05D007052 ORTHO05D008871 4.8e-62 241.5 182 70.9
CANSAT56G3240 Cannabis sativa HOM05D007052 ORTHO05D008871 2.0e-60 236.1 174 73.0
Dinv20100 Davidia involucrata HOM05D007052 ORTHO05D008871 2.0e-60 236.1 187 69.0
Cc09_g01290 Coffea canephora HOM05D007052 ORTHO05D008871 2.6e-60 235.7 173 71.1
MD10G1325900 Malus domestica HOM05D007052 ORTHO05D008871 3.4e-60 235.3 171 74.9
Gohir.A10G011300 Gossypium hirsutum HOM05D007052 ORTHO05D008871 1.7e-59 233.0 166 70.5
Gorai.011G012000 Gossypium raimondii HOM05D007052 ORTHO05D008871 1.7e-59 233.0 166 70.5
Lj6g0012328 Lotus japonicus HOM05D007052 ORTHO05D008871 2.9e-59 232.3 177 68.4
Medtr2g024300 Medicago truncatula HOM05D007052 ORTHO05D008871 2.9e-59 232.3 175 68.0
EL10Ac8g20122 Beta vulgaris HOM05D007052 ORTHO05D008871 3.8e-59 231.9 168 69.6
Lalb_Chr18g0056571 Lupinus albus HOM05D007052 ORTHO05D008871 1.1e-58 230.3 168 69.0
MD05G1351600 Malus domestica HOM05D007052 ORTHO05D008871 1.9e-58 229.6 171 73.1
PGR042G3505 Punica granatum HOM05D007052 ORTHO05D008871 1.9e-58 229.6 136 83.8
Sed0006602 Sechium edule HOM05D007052 ORTHO05D008871 3.2e-58 228.8 176 66.5
Sc05g0009410 Simmondsia chinensis HOM05D007052 ORTHO05D008871 3.2e-58 228.8 168 68.5
Lsat_1_v5_gn_1_129560 Lactuca sativa HOM05D007052 ORTHO05D008871 5.5e-58 228.0 169 68.6
TPR.G13090 Trifolium pratense HOM05D007052 ORTHO05D008871 1.0e-56 223.8 167 67.7
SGA_v2.0_scaffold7G03781 Striga asiatica HOM05D007052 ORTHO05D008871 3.9e-56 221.9 165 66.1
Gohir.D06G156800 Gossypium hirsutum HOM05D007052 ORTHO05D008871 8.7e-56 220.7 172 67.4
BcaB01g01799 Brassica carinata HOM05D007052 ORTHO05D008871 5.7e-55 218.0 163 67.5
PSO675G2240 Papaver somniferum HOM05D007052 ORTHO05D008871 7.4e-55 217.6 170 65.9
A09p26390 Brassica napus HOM05D007052 ORTHO05D008871 9.6e-55 217.2 163 66.9
C09p33580 Brassica napus HOM05D007052 ORTHO05D008871 9.6e-55 217.2 163 66.9
BolC9t56192H Brassica oleracea HOM05D007052 ORTHO05D008871 9.6e-55 217.2 163 66.9
BraA09t38213Z Brassica rapa HOM05D007052 ORTHO05D008871 9.6e-55 217.2 163 66.9
Eucgr.E03993 Eucalyptus grandis HOM05D007052 ORTHO05D008871 9.6e-55 217.2 168 65.5
MELO3C007415.2 Cucumis melo HOM05D007052 ORTHO05D008871 1.3e-54 216.9 206 59.7
BcaC04g21282 Brassica carinata HOM05D007052 ORTHO05D008871 2.8e-54 215.7 163 66.3
Sp6g04520 Schrenkiella parvula HOM05D007052 ORTHO05D008871 8.2e-54 214.2 167 67.1
Actinidia11870 Actinidia chinensis HOM05D007052 ORTHO05D008871 1.4e-53 213.4 127 81.9
HanXRQChr01g0006501 Helianthus annuus HOM05D007052 ORTHO05D008871 1.4e-53 213.4 168 66.7
PSO541G4001 Papaver somniferum HOM05D007052 ORTHO05D008871 1.4e-53 213.4 171 65.5
Carub.0006s3216 Capsella rubella HOM05D007052 ORTHO05D008871 1.8e-53 213.0 168 66.7
Aa31LG9G9870 Aethionema arabicum HOM05D007052 ORTHO05D008871 2.4e-53 212.6 163 65.0
THA.LOC104812978 Tarenaya hassleriana HOM05D007052 ORTHO05D008871 3.1e-53 212.2 179 63.7
Gohir.A06G150600 Gossypium hirsutum HOM05D007052 ORTHO05D008871 5.3e-53 211.5 172 64.5
AT4G04330 Arabidopsis thaliana HOM05D007052 ORTHO05D008871 1.5e-52 209.9 172 64.0
CARHR253150 Cardamine hirsuta HOM05D007052 ORTHO05D008871 2.6e-52 209.1 176 63.6
Sopen02g025730 Solanum pennellii HOM05D007052 ORTHO05D008871 3.4e-52 208.8 165 63.6
CsaV3_6G048750 Cucumis sativus L. HOM05D007052 ORTHO05D008871 5.8e-52 208.0 151 71.5
Migut.M01374 Erythranthe guttata HOM05D007052 ORTHO05D008871 7.6e-52 207.6 168 66.7
ECA248G2484 Erigeron canadensis HOM05D007052 ORTHO05D008871 1.7e-51 206.5 126 78.6
CSS0050367 Camellia sinensis var. sinensis HOM05D007052 ORTHO05D008871 2.2e-51 206.1 123 81.3
AUR62012751 Chenopodium quinoa HOM05D007052 ORTHO05D008871 8.4e-51 204.1 168 64.3
CAN.G1014.43 Capsicum annuum HOM05D007052 ORTHO05D008871 2.7e-49 199.1 169 62.1
CDE07G0375 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 4.6e-49 198.4 125 72.8
ATR0624G054 Amborella trichopoda HOM05D007052 ORTHO05D008871 7.9e-49 197.6 171 60.8
COL.COLO4_31826 Corchorus olitorius HOM05D007052 ORTHO05D008871 7.9e-49 197.6 126 76.2
AL6G47870 Arabidopsis lyrata HOM05D007052 ORTHO05D008871 1.8e-48 196.4 129 76.0
Os08g0425200 Oryza sativa ssp. japonica HOM05D007052 ORTHO05D008871 6.7e-48 194.5 123 76.4
DCAR_024989 Daucus carota HOM05D007052 ORTHO05D008871 5.7e-47 191.4 126 74.6
ClCG01G021710 Citrullus lanatus HOM05D007052 ORTHO05D008871 9.7e-47 190.7 152 67.1
Hund21433 Selenicereus undatus HOM05D007052 ORTHO05D008871 9.7e-47 190.7 195 54.4
Solyc02g081060.4 Solanum lycopersicum HOM05D007052 ORTHO05D008871 1.8e-45 186.4 120 75.0
Ah.09g234570 Amaranthus hybridus HOM05D007052 ORTHO05D008871 2.4e-45 186.0 173 60.1
CiPaw.09G097200 Carya illinoinensis HOM05D007052 ORTHO05D008871 5.3e-45 184.9 121 76.9
PGSC0003DMG400016462 Solanum tuberosum HOM05D007052 ORTHO05D008871 9.0e-45 184.1 150 64.0
Hund23440 Selenicereus undatus HOM05D007052 ORTHO05D008871 2.9e-43 179.1 123 70.7
Peaxi162Scf00178g00039 Petunia axillaris HOM05D007052 ORTHO05D008871 4.2e-42 175.3 127 69.3
RcHm_v2.0_Chr5g0002341 Rosa chinensis HOM05D007052 ORTHO05D008871 5.5e-42 174.9 137 67.9
AagrBONN_evm.TU.Sc2ySwM_117.3173 Anthoceros agrestis HOM05D007052 ORTHO05D008871 1.2e-41 173.7 120 66.7
AUR62021907 Chenopodium quinoa HOM05D007052 ORTHO05D008871 6.1e-41 171.4 169 56.2
Pp3c25_6660 Physcomitrium patens HOM05D007052 ORTHO05D008871 1.4e-40 170.2 153 58.8
Prupe.4G016000 Prunus persica HOM05D007052 ORTHO05D008871 1.1e-39 167.2 125 71.2
SMO118G0387 Selaginella moellendorffii HOM05D007052 ORTHO05D008871 1.1e-37 160.6 118 61.0
Atru.chr10.2273 Acer truncatum HOM05D007052 ORTHO05D008871 1.7e-35 153.3 121 63.6
Nn1g07250 Nelumbo nucifera HOM05D007052 ORTHO05D008871 8.5e-35 151.0 93 80.6
Psat1g177840 Pisum sativum HOM05D007052 ORTHO05D008871 8.5e-35 151.0 122 61.5
RcHm_v2.0_Chr7g0236991 Rosa chinensis HOM05D007052 ORTHO05D008871 2.1e-33 146.4 165 53.3
SalBow8G1921 Salvia bowleyana HOM05D007052 ORTHO05D008871 3.0e-32 142.5 89 74.2
Thhalv10029002m.g Eutrema salsugineum HOM05D007052 ORTHO05D008871 6.7e-32 141.4 123 62.6
arahy.Tifrunner.gnm1.ann1.ZUMJ7A Arachis hypogaea HOM05D007052 ORTHO05D008871 7.0e-29 131.3 122 59.8
Gorai.010G183200 Gossypium raimondii HOM05D007052 ORTHO05D008871 8.5e-27 124.4 172 45.9
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 1.5e-23 113.6 89 64.0
Zm00001eb179210 Zea mays HOM05D007052 ORTHO05D008871 9.7e-23 110.9 78 71.8
FAN21G0414 Fragaria x ananassa HOM05D007052 ORTHO05D008871 1.4e-21 107.1 85 69.4
Cre07.g339000 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 5.9e-20 101.7 125 44.8
RcHm_v2.0_Chr5g0002331 Rosa chinensis HOM05D007052 ORTHO05D008871 4.4e-15 85.5 53 79.2
Nitab4.5_0001409g0190 Nicotiana tabacum HOM05D007052 ORTHO05D008871 2.4e-13 79.7 84 56.0
Cre01.g030350 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 3.1e-13 79.3 123 39.0
PRCOL_00003846 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 3.1e-13 79.3 123 36.6
FAN25G3667 Fragaria x ananassa HOM05D007052 ORTHO05D008871 2.0e-12 76.6 59 67.8
MCO13G382 Micromonas commoda HOM05D007052 ORTHO05D008871 2.7e-12 76.3 178 30.9
MSTRG.7177 Avicennia marina HOM05D007052 ORTHO05D008871 1.0e-11 74.3 48 70.8
PRCOL_00004464 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 7.2e-10 68.2 119 32.8
Nitab4.5_0007209g0010 Nicotiana tabacum HOM05D007052 ORTHO05D008871 1.6e-09 67.0 46 65.2
PRCOL_00003373 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 5.7e-07 58.5 127 30.7
MCO14G271 Micromonas commoda HOM05D007052 ORTHO05D008871 3.7e-06 55.8 120 33.3


User provided reference genes

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